prot_E-siliculosus-1a_M_contig9.17073.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17073.1
Unique Nameprot_E-siliculosus-1a_M_contig9.17073.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length403
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig9.17073.1 vs. uniprot
Match: D7G4J8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J8_ECTSI)

HSP 1 Score: 549 bits (1415), Expect = 8.900e-191
Identity = 310/366 (84.70%), Postives = 317/366 (86.61%), Query Frame = 0 
Query:   38 MSTACLSATESGYFSFDQQIHTSIVPHELDAEGGIDIDYQITYGWRSSCTWARAEYTDSNGQEQAEEDSGCFGLAEKELLDDTEAVLAGGRSMDADTGLAVALGHAVAAAVSSIHILFFVLLYFNIDPAPVRGYLYMRGLGLMSALTSFYLLFTCVVSFFFAIKGSLDVNMSTSAGLRPSWAYVLTVIDVTIMVVVGMLACQDEEVDAAIATPQYTSSSRDEDTVKRANGKLLHLRSKSGDTFCEASTSLNGPDASASSAPKATVGSGNIMTGGSGVVFGGAHPTATAAAMSGLGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGSESESGSVLSSWTGG 403
            MSTACLSATESGYFSFDQQIHTS VP ELDAEGGIDIDYQITYGWRSSCTW RAEYT+SNG+E+A+EDSGCFGLAEKEL D+TEAVLAGGRSMDADTGLAVALGHAVAAAV+SIHILFFVLLYFNIDPAPVRGYLYMRGLGLMSALTSFYLLFTCVVSFFFAIKGSLDVNMSTSAGLRPSWAYVLTVIDVTIMVVVGMLACQDEEVDAAIATPQYTSSSRDEDTVKRANGKLLHLRSKSGDTFCEASTSLNGPDASASSAPKATVGSGNIMTGGSGVVFGGAHP ATAAAMSGLG                                        XXXXXXXXX    PAGSESE+GSVLSSWTGG
Sbjct:    1 MSTACLSATESGYFSFDQQIHTSHVPDELDAEGGIDIDYQITYGWRSSCTWVRAEYTESNGEEKAKEDSGCFGLAEKELEDETEAVLAGGRSMDADTGLAVALGHAVAAAVASIHILFFVLLYFNIDPAPVRGYLYMRGLGLMSALTSFYLLFTCVVSFFFAIKGSLDVNMSTSAGLRPSWAYVLTVIDVTIMVVVGMLACQDEEVDAAIATPQYTSSSRDEDTVKRANGKLLHLRSKSGDTFCEASTSLNGPDASASSAPKATVGSGNIMTGGSGVVFGGAHPPATAAAMSGLGX---------------------------------------XXXXXXXXXESASPAGSESENGSVLSSWTGG 327
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BLAST of mRNA_E-siliculosus-1a_M_contig9.17073.1 vs. uniprot
Match: A0A6H5JHQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ9_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 1.700e-53
Identity = 110/127 (86.61%), Postives = 110/127 (86.61%), Query Frame = 0 
Query:  224 VIDVTIMVVVGMLACQDEEVDAAIATPQ----------------YTSSSRDEDTVKRANGKLLHLRSKSGDTFCEASTSLNGPDASASSAPKATVGSGNIMTGGSGVVFGGAHPTATAAAMSGLGAG 334
            VIDVTIMVVVGMLACQDEEVDAAIATPQ                YTSSSRDEDTVKRANGKLLHLRSKSGDTFCEASTSLNGPDASASSAPKATVGSGNIMTGGSGVVFGGAHPTATAAAMSGLG G
Sbjct:   12 VIDVTIMVVVGMLACQDEEVDAAIATPQIDTPRAVRLNSYLVFQYTSSSRDEDTVKRANGKLLHLRSKSGDTFCEASTSLNGPDASASSAPKATVGSGNIMTGGSGVVFGGAHPTATAAAMSGLGPG 138
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4J8_ECTSI8.900e-19184.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHQ9_9PHAE1.700e-5386.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 199..217
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..198
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..135
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 239..403
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 218..238
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 162..172
NoneNo IPR availableTMHMMTMhelixcoord: 218..237
NoneNo IPR availableTMHMMTMhelixcoord: 141..163
NoneNo IPR availableTMHMMTMhelixcoord: 176..198
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:1735722..1746022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17073.1mRNA_E-siliculosus-1a_M_contig9.17073.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 1735290..1746022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17073.1 ID=prot_E-siliculosus-1a_M_contig9.17073.1|Name=mRNA_E-siliculosus-1a_M_contig9.17073.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=403bp
MIFRRPIRDVVEERHGSRTCGVHVFLFYILALGAVLAMSTACLSATESGY
FSFDQQIHTSIVPHELDAEGGIDIDYQITYGWRSSCTWARAEYTDSNGQE
QAEEDSGCFGLAEKELLDDTEAVLAGGRSMDADTGLAVALGHAVAAAVSS
IHILFFVLLYFNIDPAPVRGYLYMRGLGLMSALTSFYLLFTCVVSFFFAI
KGSLDVNMSTSAGLRPSWAYVLTVIDVTIMVVVGMLACQDEEVDAAIATP
QYTSSSRDEDTVKRANGKLLHLRSKSGDTFCEASTSLNGPDASASSAPKA
TVGSGNIMTGGSGVVFGGAHPTATAAAMSGLGAGGGMLPGGGGGGGGTLR
ISAAAASASAHALGRFAAAAAAAGGGAAAGAESASPAGSESESGSVLSSW
TGG
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