prot_E-siliculosus-1a_M_contig9.17058.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17058.1
Unique Nameprot_E-siliculosus-1a_M_contig9.17058.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length364
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig9.17058.1 vs. uniprot
Match: D7G4I0_ECTSI (Senescence domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I0_ECTSI)

HSP 1 Score: 662 bits (1708), Expect = 2.860e-239
Identity = 359/363 (98.90%), Postives = 359/363 (98.90%), Query Frame = 0 
Query:    1 MASKLPPPSEKQPPLGDLPAGVPYEAILTAVGTLAEQSPSAGGGVSATGTVNVIQGRVDENPEAGFFGFLSVENLNVPLVSTSRSSRVGPGVYRVCIPGKEFLLTLDQRTEPPIVEGMENVLRWFTAFEGDEMPRGVTPAGVKATGVKGVIESAGVAGAAMIMRVGEALNASIKERTEAKLAAQADQPAKKVKLGGAVTATTLTGARKVVGAGAGVAAAVIDKVSTVAGNAVANSSIVANSRGAPAGSTRREAHDMLVTGAVALGRVWEAADGQGKLLLESTGDGMGRIAGAKYGSEAEHAARSAGQIGLDGWRIFRFPTKLGVTTLVKGAVKGATAAGSQSSSTGNVGGYVAQPAPPNPSSS 363
            M SKLPPP EKQPPLGDLPAGVPYEAILTAVGTLAEQSPSAGGGVSATG VNVIQGRVDENPEAGFFGFLSVENLNVPLVSTSRSSRVGPGVYRVCIPGKEFLLTLDQRTEPPIVEGMENVLRWFTAFEGDEMPRGVTPAGVKATGVKGVIESAGVAGAAMIMRVGEALNASIKERTEAKLAAQADQPAKKVKLGGAVTATTLTGARKVVGAGAGVAAAVIDKVSTVAGNAVANSSIVANSRGAPAGSTRREAHDMLVTGAVALGRVWEAADGQGKLLLESTGDGMGRIAGAKYGSEAEHAARSAGQIGLDGWRIFRFPTKLGVTTLVKGAVKGATAAGSQSSST NVGGYVAQPAPPNPSSS
Sbjct:    1 MTSKLPPPPEKQPPLGDLPAGVPYEAILTAVGTLAEQSPSAGGGVSATGAVNVIQGRVDENPEAGFFGFLSVENLNVPLVSTSRSSRVGPGVYRVCIPGKEFLLTLDQRTEPPIVEGMENVLRWFTAFEGDEMPRGVTPAGVKATGVKGVIESAGVAGAAMIMRVGEALNASIKERTEAKLAAQADQPAKKVKLGGAVTATTLTGARKVVGAGAGVAAAVIDKVSTVAGNAVANSSIVANSRGAPAGSTRREAHDMLVTGAVALGRVWEAADGQGKLLLESTGDGMGRIAGAKYGSEAEHAARSAGQIGLDGWRIFRFPTKLGVTTLVKGAVKGATAAGSQSSSTSNVGGYVAQPAPPNPSSS 363
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BLAST of mRNA_E-siliculosus-1a_M_contig9.17058.1 vs. uniprot
Match: A0A1X6P731_PORUM (Senescence domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P731_PORUM)

HSP 1 Score: 70.5 bits (171), Expect = 1.110e-9
Identity = 42/116 (36.21%), Postives = 60/116 (51.72%), Query Frame = 0 
Query:  214 AGVAAAVIDKVSTVAGNAVANSSIVANSRGAPAGSTRREAHDMLVTGAVALGRVWEAADGQGKLLLESTGDGMGRIAGAKYGSEAEHAARSAGQIGLDGWRIFRFPTKLGVTTLVK 329
            AG    V  +V+T  G  +A S  +  +R AP  S     H  L TG +A   ++EAAD  G+ +L +T  G   +  A+YG  A   A  AG   +  +R+ RFP+K G TT+VK
Sbjct:  251 AGALTGVGHRVATAVGGGLAESGAMRRAREAPPNSVGGVFHTALSTGCLAFANIYEAADETGRAILTTTATGTTALTDARYGPRAASVAHDAGLTAVSAYRVVRFPSKFGATTVVK 366
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17058.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4I0_ECTSI2.860e-23998.90Senescence domain-containing protein n=2 Tax=Ectoc... [more]
A0A1X6P731_PORUM1.110e-936.21Senescence domain-containing protein n=1 Tax=Porph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009686Senescence/spartin-associatedPFAMPF06911Senescencecoord: 148..307
e-value: 1.1E-6
score: 29.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:1620670..1622465 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17058.1mRNA_E-siliculosus-1a_M_contig9.17058.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 1620630..1624329 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17058.1 ID=prot_E-siliculosus-1a_M_contig9.17058.1|Name=mRNA_E-siliculosus-1a_M_contig9.17058.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=364bp
MASKLPPPSEKQPPLGDLPAGVPYEAILTAVGTLAEQSPSAGGGVSATGT
VNVIQGRVDENPEAGFFGFLSVENLNVPLVSTSRSSRVGPGVYRVCIPGK
EFLLTLDQRTEPPIVEGMENVLRWFTAFEGDEMPRGVTPAGVKATGVKGV
IESAGVAGAAMIMRVGEALNASIKERTEAKLAAQADQPAKKVKLGGAVTA
TTLTGARKVVGAGAGVAAAVIDKVSTVAGNAVANSSIVANSRGAPAGSTR
REAHDMLVTGAVALGRVWEAADGQGKLLLESTGDGMGRIAGAKYGSEAEH
AARSAGQIGLDGWRIFRFPTKLGVTTLVKGAVKGATAAGSQSSSTGNVGG
YVAQPAPPNPSSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009686Senescence/spartin