prot_E-siliculosus-1a_M_contig9.17020.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17020.1
Unique Nameprot_E-siliculosus-1a_M_contig9.17020.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length240
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17020.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 148..190
e-value: 4.0E-9
score: 36.5
coord: 16..58
e-value: 2.6E-5
score: 24.3
coord: 82..122
e-value: 1.5E-4
score: 21.8
coord: 192..233
e-value: 5.7E-6
score: 26.4
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 4..122
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 59..235
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 59..235
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 4..122
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 26..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:1130065..1130784 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17020.1mRNA_E-siliculosus-1a_M_contig9.17020.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 1130065..1131473 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17020.1 ID=prot_E-siliculosus-1a_M_contig9.17020.1|Name=mRNA_E-siliculosus-1a_M_contig9.17020.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=240bp
VVWPTSLQQLGFYGNFDQPIVGVVWPASLQQLVFNGNFDQSIVGVVWPVS
LQQLSFGNAFNQPIVGVVWPVSLQQLWFSLNFDQPIVGVVWPVSLQRLRF
GWRFNKPIVGVVWPTSLQQLGFYGSFDQSIVGVVWPTSLQQLGFYGNFDQ
PIVGVVWPVSLQHLSFGWNFNQPIVAVVWPASLKQLSFGDNFDQPIVGVV
WPASVTELSFGKSFNQPVVNVVWPSALQVLSFGAGLSNP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP