prot_E-siliculosus-1a_M_contig9.16993.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.16993.1
Unique Nameprot_E-siliculosus-1a_M_contig9.16993.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length447
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.16993.1 vs. uniprot
Match: A0A6H5KT20_9PHAE (FtsJ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT20_9PHAE)

HSP 1 Score: 453 bits (1165), Expect = 1.120e-152
Identity = 324/446 (72.65%), Postives = 331/446 (74.22%), Query Frame = 0
Query:    5 LPGRKGLRRLATTTAXXXXXXXXREISLLDLHMARGFSGSAKSNSNKGKANGGGQARGGG--VAHKQRQGRPGAGKSGAGGTAVGRATKGGSSGLWMRRHLKDPYVSAAVEAGAPSRAAFKLVEINDRHGVLSAGDRVVDLGAAPGGWSMVAARIVHARGPRTPQQGAGRRXXXXXXXXXXPALPPPLPEGRLEAAERKGRRGGGAVVVAVDLLDMEADLPGVQAIRGDFRDAEVESRIFGLLSARERLQPSPGNERPKRDEQRALPLQPPGATVAESGEERADLRRDDTKLRSSDGCSVDDGSVSDGVDEEEAFLLRGTSSSRTLLPRPEQPSTDSLQHLFLAGG-NGDPATAAAKRNAADGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRASVVLSDMAPSFSGDRDTDQARVAALVLDALAACLGDEASRRREPP 447
            L GRKGLRRLATTTA XXXXXXXR ISLLDLH+ARGFSGSAKS                   VAHKQRQ RPGAGK+GAGG A GRATKGGSSGLWMRRHLKDPYVSAAVEAGAPSRAAFKLVEINDRHGVLSAGDR                                                                RGG AVVVAVDLLDMEADLPGVQAIRGDFRDAEVESRIF LLSARERLQP+PGNERPK DEQR LPLQPP  T AESG+ERADLRRDDTKLRSSDG  VDDGS SDGV EE+AFLLRGTS+SRTLLPRPEQPSTDSL+HLFLAGG N DPAT           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRASVVLSDMAPSFSGDRDTDQ RVAALVLDALAACLGDEASRR EPP
Sbjct:    3 LRGRKGLRRLATTTAAXXXXXXXRAISLLDLHIARGFSGSAKSXXXXXXXXXXXXXXXXXXXVAHKQRQKRPGAGKNGAGGAAGGRATKGGSSGLWMRRHLKDPYVSAAVEAGAPSRAAFKLVEINDRHGVLSAGDR----------------------------------------------------------------RGGEAVVVAVDLLDMEADLPGVQAIRGDFRDAEVESRIFSLLSARERLQPAPGNERPKLDEQRVLPLQPPEVTAAESGKERADLRRDDTKLRSSDGYGVDDGSASDGVGEEDAFLLRGTSASRTLLPRPEQPSTDSLEHLFLAGGGNRDPATXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRASVVLSDMAPSFSGDRDTDQGRVAALVLDALAACLGDEASRRSEPP 383          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16993.1 vs. uniprot
Match: A0A7C2LRX8_9HYPH (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LRX8_9HYPH)

HSP 1 Score: 97.8 bits (242), Expect = 1.020e-19
Identity = 72/177 (40.68%), Postives = 92/177 (51.98%), Query Frame = 0
Query:   78 KSGAGG---------TAVGRATKGGSSGLWMRRHLKDPYVSAAVEAGAPSRAAFKLVEINDRHGVLSAGDRVVDLGAAPGGWSMVAARIVHARGPRTPQQGAGRRXXXXXXXXXXPALPPPLPEGRLEAAERKGRRGGGAVVVAVDLLDMEADLPGVQAIRGDFRDAEVESRIFGLL 245
            +SGAGG         TA GR+   GSS  W++R L DPYV+ A   G  SRAAFKL+EI+ RH +L+ G RVVDLGAAPGGWS VAA                                      R+ AAE +G+      VVA+DLL ME  +PGV+ ++ DF  A+  +R+  LL
Sbjct:    6 RSGAGGRRRLAMRLRTAKGRS---GSSQRWLQRQLNDPYVAEAKRRGYRSRAAFKLMEIDARHRLLAPGLRVVDLGAAPGGWSQVAAE-------------------------------------RVRAAEGRGQ------VVAIDLLPMEP-IPGVEVVQLDFLSADAPARLTALL 135          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16993.1 vs. uniprot
Match: A0A0D6JFQ9_9HYPH (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Candidatus Filomicrobium marinum TaxID=1608628 RepID=A0A0D6JFQ9_9HYPH)

HSP 1 Score: 97.8 bits (242), Expect = 1.460e-19
Identity = 59/152 (38.82%), Postives = 80/152 (52.63%), Query Frame = 0
Query:   94 SSGLWMRRHLKDPYVSAAVEAGAPSRAAFKLVEINDRHGVLSAGDRVVDLGAAPGGWSMVAARIVHARGPRTPQQGAGRRXXXXXXXXXXPALPPPLPEGRLEAAERKGRRGGGAVVVAVDLLDMEADLPGVQAIRGDFRDAEVESRIFGLL 245
            SS  W+ R L DPYV+AA   G  SRAA+KL+EI+D+H +L  G RV+DLGAAPGGWS +AA                                      R++A + +G + G   VVA+D LD+E  LPGV  ++ DF D + E R+  +L
Sbjct:   32 SSARWLERQLNDPYVAAAKREGMRSRAAYKLLEIDDKHRILKPGQRVIDLGAAPGGWSQIAAD-------------------------------------RVKALDGQGDKRG--QVVAIDYLDVEP-LPGVDFVKMDFTDEDAEDRLKSML 143          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16993.1 vs. uniprot
Match: A0A833GDH3_9HYPH (Ribosomal RNA large subunit methyltransferase E n=2 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833GDH3_9HYPH)

HSP 1 Score: 96.3 bits (238), Expect = 3.700e-19
Identity = 64/152 (42.11%), Postives = 79/152 (51.97%), Query Frame = 0
Query:   94 SSGLWMRRHLKDPYVSAAVEAGAPSRAAFKLVEINDRHGVLSAGDRVVDLGAAPGGWSMVAARIVHARGPRTPQQGAGRRXXXXXXXXXXPALPPPLPEGRLEAAERKGRRGGGAVVVAVDLLDMEADLPGVQAIRGDFRDAEVESRIFGLL 245
            SS LW+ R L DPYV+ A   G  SRAA+KL+EI+D++  L AG RV DLGAAPGGWS VAA+ V AR                                     E KGR      VVA+DLLDM+A +PGV+ +  DF D +   R+  LL
Sbjct:   26 SSKLWLDRQLNDPYVARARREGYRSRAAYKLIEIDDKYRFLKAGCRVADLGAAPGGWSQVAAQRVGAR-------------------------------------EGKGR------VVAIDLLDMDA-IPGVEFLMLDFLDPDAPGRLKALL 133          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16993.1 vs. uniprot
Match: A0A1B1YRE1_9GAMM (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Immundisolibacter cernigliae TaxID=1810504 RepID=A0A1B1YRE1_9GAMM)

HSP 1 Score: 94.4 bits (233), Expect = 1.060e-18
Identity = 67/156 (42.95%), Postives = 79/156 (50.64%), Query Frame = 0
Query:   90 TKGGSSGLWMRRHLKDPYVSAAVEAGAPSRAAFKLVEINDRHGVLSAGDRVVDLGAAPGGWSMVAARIVHARGPRTPQQGAGRRXXXXXXXXXXPALPPPLPEGRLEAAERKGRRGGGAVVVAVDLLDMEADLPGVQAIRGDFRDAEVESRIFGLL 245
            +K GSS  W+  H+ DPYV  A   G  SRA+FKL+EIN R  +L  G  VVDLGAAPGGWS VA+ IV   GPR                                     GR      V+AVDLL+M A LPGV+ I GDF DA V  ++ GLL
Sbjct:    2 SKAGSSRRWLHEHIADPYVRQAQAQGYRSRASFKLLEINQRDRLLQPGATVVDLGAAPGGWSQVASTIV---GPR-------------------------------------GR------VLAVDLLEM-ALLPGVEFILGDFGDAAVLEQMLGLL 110          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16993.1 vs. uniprot
Match: A0A836T9Y5_9GAMM (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Chromatiaceae bacterium TaxID=2049432 RepID=A0A836T9Y5_9GAMM)

HSP 1 Score: 94.0 bits (232), Expect = 1.390e-18
Identity = 58/155 (37.42%), Postives = 77/155 (49.68%), Query Frame = 0
Query:   94 SSGLWMRRHLKDPYVSAAVEAGAPSRAAFKLVEINDRHGVLSAGDRVVDLGAAPGGWSMVAARIVHARGPRTPQQGAGRRXXXXXXXXXXPALPPPLPEGRLEAAERKGRRGGGAVVVAVDLLDMEADLPGVQAIRGDFRDAEVESRIFGLLSAR 248
            SS  WM+RHL D YV  A   G  SRAA+KL+EI +R  ++  G  VVDLGAAPGGWS +AAR+V  +G                                               V A+D+L+M+  +PGV+ ++GDFR+AEV  R+  LL  R
Sbjct:    6 SSHQWMQRHLNDEYVKRARREGYRSRAAYKLLEIQERDRIIKPGQVVVDLGAAPGGWSQIAARLVGPKGE----------------------------------------------VFAMDILEMDP-MPGVRFLQGDFREAEVMQRLMDLLGGR 113          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16993.1 vs. uniprot
Match: A0A450VLX3_9GAMM (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Candidatus Kentron sp. H TaxID=2126337 RepID=A0A450VLX3_9GAMM)

HSP 1 Score: 93.6 bits (231), Expect = 1.940e-18
Identity = 59/155 (38.06%), Postives = 76/155 (49.03%), Query Frame = 0
Query:   94 SSGLWMRRHLKDPYVSAAVEAGAPSRAAFKLVEINDRHGVLSAGDRVVDLGAAPGGWSMVAARIVHARGPRTPQQGAGRRXXXXXXXXXXPALPPPLPEGRLEAAERKGRRGGGAVVVAVDLLDMEADLPGVQAIRGDFRDAEVESRIFGLLSAR 248
            S+G W+ +H KDP+V  A EAG  SRAA+KL+EIN R G+   GD VVDLGAAPGGWS VA++ V                                              GG   ++A+D L M   LPGV ++ GD RD  V+S I  +L+ R
Sbjct:    3 STGNWITKHRKDPFVRDAREAGYRSRAAYKLLEINQRDGLFQRGDVVVDLGAAPGGWSQVASQQV----------------------------------------------GGAGRIIAIDRLPM-VPLPGVDSLEGDIRDRAVQSWIVEILAGR 110          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16993.1 vs. uniprot
Match: A0A3C1SSX2_9GAMM (23S rRNA methyltransferase (Fragment) n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3C1SSX2_9GAMM)

HSP 1 Score: 91.3 bits (225), Expect = 2.470e-18
Identity = 59/155 (38.06%), Postives = 76/155 (49.03%), Query Frame = 0
Query:   94 SSGLWMRRHLKDPYVSAAVEAGAPSRAAFKLVEINDRHGVLSAGDRVVDLGAAPGGWSMVAARIVHARGPRTPQQGAGRRXXXXXXXXXXPALPPPLPEGRLEAAERKGRRGGGAVVVAVDLLDMEADLPGVQAIRGDFRDAEVESRIFGLLSAR 248
            SSG W+R H  D YV  A E G  SRA +KL+EI ++  +L  G  VVDLGAAPGGWS +AARIV  RG                                              +V+A+D+L +E  LPGV A++GDFR+A V  R+   L+ R
Sbjct:    6 SSGRWLREHFTDEYVLRAREEGYRSRAVYKLLEIQEKDRILHPGMTVVDLGAAPGGWSQLAARIVGERG----------------------------------------------LVIALDVLPVEP-LPGVTALQGDFREAAVLDRLLETLAVR 113          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16993.1 vs. uniprot
Match: A0A1F4B6B8_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_19 TaxID=1797491 RepID=A0A1F4B6B8_9PROT)

HSP 1 Score: 93.2 bits (230), Expect = 2.730e-18
Identity = 63/152 (41.45%), Postives = 78/152 (51.32%), Query Frame = 0
Query:   94 SSGLWMRRHLKDPYVSAAVEAGAPSRAAFKLVEINDRHGVLSAGDRVVDLGAAPGGWSMVAARIVHARGPRTPQQGAGRRXXXXXXXXXXPALPPPLPEGRLEAAERKGRRGGGAVVVAVDLLDMEADLPGVQAIRGDFRDAEVESRIFGLL 245
            SS  W++RH+ DP+V  A E+G  SRAAFKL+EI+ R  +L  G RVVDLGAAPGGWS VAA  V                                            R GG  VVVAVDLL++ A + GV  +RGDFRDA V++ +   L
Sbjct:    5 SSQRWLQRHVTDPFVRRARESGRRSRAAFKLLEIDQRERLLRPGARVVDLGAAPGGWSQVAAERV--------------------------------------------RPGG--VVVAVDLLEI-APISGVTVLRGDFRDAAVQAAVAEAL 109          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16993.1 vs. uniprot
Match: UPI001081FC87 (RlmE family RNA methyltransferase n=1 Tax=Crenalkalicoccus roseus TaxID=1485588 RepID=UPI001081FC87)

HSP 1 Score: 93.6 bits (231), Expect = 3.210e-18
Identity = 65/162 (40.12%), Postives = 81/162 (50.00%), Query Frame = 0
Query:   84 TAVGRATKGGSSGLWMRRHLKDPYVSAAVEAGAPSRAAFKLVEINDRHGVLSAGDRVVDLGAAPGGWSMVAARIVHARGPRTPQQGAGRRXXXXXXXXXXPALPPPLPEGRLEAAERKGRRGGGAVVVAVDLLDMEADLPGVQAIRGDFRDAEVESRIFGLL 245
            TA GR+T    S  W+ R L DPYV AA E G  SRAAFKL+E+++R G+L  G RVVDLGAAPGGW+ VA R     GP                                     KGR      VVA+DLL M+  LPG   ++GDF++ E E+ +   L
Sbjct:   19 TARGRST---GSQRWLERQLNDPYVRAAKEQGLRSRAAFKLIELDERFGLLRPGARVVDLGAAPGGWTQVAVRKA---GP-------------------------------------KGR------VVALDLLPMDP-LPGATVLQGDFQEPEAEAAVLAAL 130          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT20_9PHAE1.120e-15272.65FtsJ domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7C2LRX8_9HYPH1.020e-1940.68Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A0D6JFQ9_9HYPH1.460e-1938.82Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A833GDH3_9HYPH3.700e-1942.11Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A1B1YRE1_9GAMM1.060e-1842.95Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A836T9Y5_9GAMM1.390e-1837.42Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A450VLX3_9GAMM1.940e-1838.06Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A3C1SSX2_9GAMM2.470e-1838.0623S rRNA methyltransferase (Fragment) n=1 Tax=Cand... [more]
A0A1F4B6B8_9PROT2.730e-1841.45Ribosomal RNA large subunit methyltransferase E n=... [more]
UPI001081FC873.210e-1840.12RlmE family RNA methyltransferase n=1 Tax=Crenalka... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002877Ribosomal RNA methyltransferase FtsJ domainPFAMPF01728FtsJcoord: 118..436
e-value: 1.7E-25
score: 90.1
NoneNo IPR availablePANTHERPTHR10920:SF20RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE Ecoord: 93..162
NoneNo IPR availablePANTHERPTHR10920RIBOSOMAL RNA METHYLTRANSFERASEcoord: 93..162
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 116..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:802248..806806 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.16993.1mRNA_E-siliculosus-1a_M_contig9.16993.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 802248..806806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.16993.1 ID=prot_E-siliculosus-1a_M_contig9.16993.1|Name=mRNA_E-siliculosus-1a_M_contig9.16993.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=447bp
MFKTLPGRKGLRRLATTTAATATTTTTREISLLDLHMARGFSGSAKSNSN
KGKANGGGQARGGGVAHKQRQGRPGAGKSGAGGTAVGRATKGGSSGLWMR
RHLKDPYVSAAVEAGAPSRAAFKLVEINDRHGVLSAGDRVVDLGAAPGGW
SMVAARIVHARGPRTPQQGAGRRGGGSRGGGAPPALPPPLPEGRLEAAER
KGRRGGGAVVVAVDLLDMEADLPGVQAIRGDFRDAEVESRIFGLLSARER
LQPSPGNERPKRDEQRALPLQPPGATVAESGEERADLRRDDTKLRSSDGC
SVDDGSVSDGVDEEEAFLLRGTSSSRTLLPRPEQPSTDSLQHLFLAGGNG
DPATAAAKRNAADGLPPPPDHRHGDAAASAAGKGPQLQPPPRRRDPPPPT
RASVVLSDMAPSFSGDRDTDQARVAALVLDALAACLGDEASRRREPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR002877rRNA_MeTrfase_FtsJ_dom