prot_E-siliculosus-1a_M_contig9.16985.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.16985.1
Unique Nameprot_E-siliculosus-1a_M_contig9.16985.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length340
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig9.16985.1 vs. uniprot
Match: D7G1K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K4_ECTSI)

HSP 1 Score: 532 bits (1371), Expect = 5.850e-189
Identity = 307/325 (94.46%), Postives = 312/325 (96.00%), Query Frame = 0 
Query:   15 MEACLGGKSLHQVQKVCGLPGPDGSIQAFTPHDEEEESYFGGDPTTEDPGPSVSGGGSRKWTVVVYIMAALVGILVSYVASATLIVRKVEGLWRLPFGGGVFEALCEGAAQCWRGFRRQCXXXXXXXFRGDDGSRGDDQRPGFSERKLYGYTSAAGEGRRLVFPTRGDAEETRRGRRGRSRGSSRGXXXXXXXXXXRSSSPARRTASTFYEDEEASRPRARSDSSGSGGASGDFYDGERLFGAAGAGSSASGRAGXXXRRSNGYGAADGRGVAPPAGGAGREHLRPVGTARRKRGGGVQILPTSAVDAAAAAAKLAEEIANDDEV 339
            MEACLGGKSLHQ+QKVCGLPGPDGSIQAFTPHDEEE SYFG DPTTEDPGPS+SGGGSRKWTV+VYIMAALVGILVSYV SATLIVRKVEGLWRLPFGGGVFEALCEGAAQCWRGFRR  XXXXXXXFRGDDGS GD QRP FSERKLYGYTSAAGEGRRL+FPTRGDAEETRRGRRGRSRG+SRGXXXXXXXXXXRSSSP RRTASTFYEDEEASRPRARSDSSGSGGASGDFYDGERLFGAAGAGSSASGRA XXX RSNGYGAADGRGVAP AGGAGRE LRPVGTARRKRGGGVQILPTSAVDAAAAAAKLAEEIANDDEV
Sbjct:    1 MEACLGGKSLHQLQKVCGLPGPDGSIQAFTPHDEEEGSYFGDDPTTEDPGPSLSGGGSRKWTVIVYIMAALVGILVSYVTSATLIVRKVEGLWRLPFGGGVFEALCEGAAQCWRGFRRXXXXXXXXXFRGDDGSPGDGQRPDFSERKLYGYTSAAGEGRRLIFPTRGDAEETRRGRRGRSRGTSRGXXXXXXXXXXRSSSPTRRTASTFYEDEEASRPRARSDSSGSGGASGDFYDGERLFGAAGAGSSASGRAXXXXXRSNGYGAADGRGVAPSAGGAGRELLRPVGTARRKRGGGVQILPTSAVDAAAAAAKLAEEIANDDEV 325
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BLAST of mRNA_E-siliculosus-1a_M_contig9.16985.1 vs. uniprot
Match: A0A6H5KCH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCH0_9PHAE)

HSP 1 Score: 430 bits (1105), Expect = 3.370e-143
Identity = 273/369 (73.98%), Postives = 281/369 (76.15%), Query Frame = 0 
Query:    1 DVRELRWRRRKGGGMEACL--------------------------GGKSLHQVQKVCGLPGPDGSIQAFTPHDEEEESYFGGDPTTEDPGPSVSGGGSRKWTVVVYIMAALVGILVSYVASATLIVRKVEGLWRLPFGGGVFEALCEGAAQCWRGFRRQCXXXXXXXFRGDDGSRGDDQRPGFSERKLYGYTSAAGEGRRLVFPTRGDAEETRRGRRGRSRGSSRGXXXXXXXXXXRSSSPARRTASTFYEDEEASRPRARSDSSGSGG----ASGDFYDGERLFGAAGAGSSASGRAGXXXRRSNGYGAADGRGVAPPAGGAGREHLRPVGTARRKRGGGVQILPTSAVDAAAAAAKLAEEIANDDEV 339
            DVRELRWRRRK GGMEACL                          GGKSLHQ+QKVCGLPGPDGSIQAFTPHDEEEESYFGGDPTTE   PSV GGG+RKWTVVVYIMAALVGILVSYVASATLIVRKVEGLWRLPFGGGVF ALCEGAAQCWRGFRR+CXXXXXXXFRGDDGS GDD+RP FSE KLYGYTSAAGEGRRL+FPTRGDAEETRRG           XXXXXXXX  RSSSP+ R ASTFYEDEEASRP               A+GD YD ER FGAAGAGSSASGRA XXX               P AG  G+EHLRPVGTARRKRGGGVQIL TSAVDAAAAAAKLAEEIANDDEV
Sbjct:  334 DVRELRWRRRKRGGMEACLVXVXXXXXXXXXXXXXXXXXXXXXXLGGKSLHQLQKVCGLPGPDGSIQAFTPHDEEEESYFGGDPTTEGTEPSVGGGGNRKWTVVVYIMAALVGILVSYVASATLIVRKVEGLWRLPFGGGVFGALCEGAAQCWRGFRRRCXXXXXXXFRGDDGSPGDDERPDFSEGKLYGYTSAAGEGRRLIFPTRGDAEETRRGXXXXXXXXXX-XXXXXXXXGPRSSSPSHRMASTFYEDEEASRPXXXXXXXXXXXXXXXAAGDSYDDERPFGAAGAGSSASGRAXXXXXXXXXXXXXXXXXXXPSAGRTGQEHLRPVGTARRKRGGGVQILATSAVDAAAAAAKLAEEIANDDEV 701
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BLAST of mRNA_E-siliculosus-1a_M_contig9.16985.1 vs. uniprot
Match: A0A835ZD19_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD19_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.660e-7
Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = 0 
Query:   68 SGGGSRKWTVVVYIMAALVGILVSYVASATLIVRKVEGLWRLPFGGGVFEAL-------CEGAAQCWR 128
            SG G R   VVVY+M A + +LVSY+ SA +I+R+ EG+WRLPFGGGV +AL       C G+ + W+
Sbjct:  546 SGLGPRT-RVVVYLMIAALALLVSYMVSAAIILRRTEGIWRLPFGGGVLDALHRALAGACGGSWRAWQ 612
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16985.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1K4_ECTSI5.850e-18994.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCH0_9PHAE3.370e-14373.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZD19_9STRA1.660e-750.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 101..339
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..76
NoneNo IPR availableTMHMMTMhelixcoord: 77..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:693447..696806 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.16985.1mRNA_E-siliculosus-1a_M_contig9.16985.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 693447..696806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.16985.1 ID=prot_E-siliculosus-1a_M_contig9.16985.1|Name=mRNA_E-siliculosus-1a_M_contig9.16985.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=340bp
DVRELRWRRRKGGGMEACLGGKSLHQVQKVCGLPGPDGSIQAFTPHDEEE
ESYFGGDPTTEDPGPSVSGGGSRKWTVVVYIMAALVGILVSYVASATLIV
RKVEGLWRLPFGGGVFEALCEGAAQCWRGFRRQCCCCCSCCFRGDDGSRG
DDQRPGFSERKLYGYTSAAGEGRRLVFPTRGDAEETRRGRRGRSRGSSRG
GGGGGDGGGPRSSSPARRTASTFYEDEEASRPRARSDSSGSGGASGDFYD
GERLFGAAGAGSSASGRAGAGGRRSNGYGAADGRGVAPPAGGAGREHLRP
VGTARRKRGGGVQILPTSAVDAAAAAAKLAEEIANDDEV*
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