mRNA_E-siliculosus-1a_M_contig9.16985.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.16985.1 vs. uniprot
Match: D7G1K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K4_ECTSI) HSP 1 Score: 532 bits (1371), Expect = 5.850e-189 Identity = 307/325 (94.46%), Postives = 312/325 (96.00%), Query Frame = 1
Query: 43 MEACLGGKSLHQVQKVCGLPGPDGSIQAFTPHDEEEESYFGGDPTTEDPGPSVSGGGSRKWTVVVYIMAALVGILVSYVASATLIVRKVEGLWRLPFGGGVFEALCEGAAQCWRGFRRQCXXXXXXXFRGDDGSRGDDQRPGFSERKLYGYTSAAGEGRRLVFPTRGDAEETRRGRRGRSRGSSRGXXXXXXXXXXRSSSPARRTASTFYEDEEASRPRARSDSSGSGGASGDFYDGERLFGAAGAGSSASGRAGXXXRRSNGYGAADGRGVAPPAGGAGREHLRPVGTARRKRGGGVQILPTSAVDAAAAAAKLAEEIANDDEV 1017
MEACLGGKSLHQ+QKVCGLPGPDGSIQAFTPHDEEE SYFG DPTTEDPGPS+SGGGSRKWTV+VYIMAALVGILVSYV SATLIVRKVEGLWRLPFGGGVFEALCEGAAQCWRGFRR XXXXXXXFRGDDGS GD QRP FSERKLYGYTSAAGEGRRL+FPTRGDAEETRRGRRGRSRG+SRGXXXXXXXXXXRSSSP RRTASTFYEDEEASRPRARSDSSGSGGASGDFYDGERLFGAAGAGSSASGRA XXX RSNGYGAADGRGVAP AGGAGRE LRPVGTARRKRGGGVQILPTSAVDAAAAAAKLAEEIANDDEV
Sbjct: 1 MEACLGGKSLHQLQKVCGLPGPDGSIQAFTPHDEEEGSYFGDDPTTEDPGPSLSGGGSRKWTVIVYIMAALVGILVSYVTSATLIVRKVEGLWRLPFGGGVFEALCEGAAQCWRGFRRXXXXXXXXXFRGDDGSPGDGQRPDFSERKLYGYTSAAGEGRRLIFPTRGDAEETRRGRRGRSRGTSRGXXXXXXXXXXRSSSPTRRTASTFYEDEEASRPRARSDSSGSGGASGDFYDGERLFGAAGAGSSASGRAXXXXXRSNGYGAADGRGVAPSAGGAGRELLRPVGTARRKRGGGVQILPTSAVDAAAAAAKLAEEIANDDEV 325
BLAST of mRNA_E-siliculosus-1a_M_contig9.16985.1 vs. uniprot
Match: A0A6H5KCH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCH0_9PHAE) HSP 1 Score: 430 bits (1105), Expect = 3.370e-143 Identity = 273/369 (73.98%), Postives = 281/369 (76.15%), Query Frame = 1
Query: 1 DVRELRWRRRKGGGMEACL--------------------------GGKSLHQVQKVCGLPGPDGSIQAFTPHDEEEESYFGGDPTTEDPGPSVSGGGSRKWTVVVYIMAALVGILVSYVASATLIVRKVEGLWRLPFGGGVFEALCEGAAQCWRGFRRQCXXXXXXXFRGDDGSRGDDQRPGFSERKLYGYTSAAGEGRRLVFPTRGDAEETRRGRRGRSRGSSRGXXXXXXXXXXRSSSPARRTASTFYEDEEASRPRARSDSSGSGG----ASGDFYDGERLFGAAGAGSSASGRAGXXXRRSNGYGAADGRGVAPPAGGAGREHLRPVGTARRKRGGGVQILPTSAVDAAAAAAKLAEEIANDDEV 1017
DVRELRWRRRK GGMEACL GGKSLHQ+QKVCGLPGPDGSIQAFTPHDEEEESYFGGDPTTE PSV GGG+RKWTVVVYIMAALVGILVSYVASATLIVRKVEGLWRLPFGGGVF ALCEGAAQCWRGFRR+CXXXXXXXFRGDDGS GDD+RP FSE KLYGYTSAAGEGRRL+FPTRGDAEETRRG XXXXXXXX RSSSP+ R ASTFYEDEEASRP A+GD YD ER FGAAGAGSSASGRA XXX P AG G+EHLRPVGTARRKRGGGVQIL TSAVDAAAAAAKLAEEIANDDEV
Sbjct: 334 DVRELRWRRRKRGGMEACLVXVXXXXXXXXXXXXXXXXXXXXXXLGGKSLHQLQKVCGLPGPDGSIQAFTPHDEEEESYFGGDPTTEGTEPSVGGGGNRKWTVVVYIMAALVGILVSYVASATLIVRKVEGLWRLPFGGGVFGALCEGAAQCWRGFRRRCXXXXXXXFRGDDGSPGDDERPDFSEGKLYGYTSAAGEGRRLIFPTRGDAEETRRGXXXXXXXXXX-XXXXXXXXGPRSSSPSHRMASTFYEDEEASRPXXXXXXXXXXXXXXXAAGDSYDDERPFGAAGAGSSASGRAXXXXXXXXXXXXXXXXXXXPSAGRTGQEHLRPVGTARRKRGGGVQILATSAVDAAAAAAKLAEEIANDDEV 701
BLAST of mRNA_E-siliculosus-1a_M_contig9.16985.1 vs. uniprot
Match: A0A835ZD19_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD19_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 1.660e-7 Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 202 SGGGSRKWTVVVYIMAALVGILVSYVASATLIVRKVEGLWRLPFGGGVFEAL-------CEGAAQCWR 384
SG G R VVVY+M A + +LVSY+ SA +I+R+ EG+WRLPFGGGV +AL C G+ + W+
Sbjct: 546 SGLGPRT-RVVVYLMIAALALLVSYMVSAAIILRRTEGIWRLPFGGGVLDALHRALAGACGGSWRAWQ 612 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig9.16985.1 >prot_E-siliculosus-1a_M_contig9.16985.1 ID=prot_E-siliculosus-1a_M_contig9.16985.1|Name=mRNA_E-siliculosus-1a_M_contig9.16985.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=340bp DVRELRWRRRKGGGMEACLGGKSLHQVQKVCGLPGPDGSIQAFTPHDEEEback to top mRNA from alignment at E-siliculosus-1a_M_contig9:693447..696806+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig9.16985.1 ID=mRNA_E-siliculosus-1a_M_contig9.16985.1|Name=mRNA_E-siliculosus-1a_M_contig9.16985.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3360bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:693447..696806+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:693447..696806+ >mRNA_E-siliculosus-1a_M_contig9.16985.1 ID=mRNA_E-siliculosus-1a_M_contig9.16985.1|Name=mRNA_E-siliculosus-1a_M_contig9.16985.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2040bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:693447..696806+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |