prot_E-siliculosus-1a_M_contig9.16977.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.16977.1
Unique Nameprot_E-siliculosus-1a_M_contig9.16977.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length193
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig9.16977.1 vs. uniprot
Match: A0A6H5JDQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ5_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 1.130e-75
Identity = 180/193 (93.26%), Postives = 183/193 (94.82%), Query Frame = 0 
Query:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKELSKSGFSFRHPDAPPPFDDXXXXXXXXXXXXXXXXXXXXXXXXX-LSDAEASMVDEDTAMGDVGDAGEXXXXXXXXXXXXXXXXXXXXXXXXGGRNTASELAAKLKKKRRQAKRRNYVEFPAHEN 192
            MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKE+SKSGFSFRHPDAPPPFDD      XXXXXXXXXXXXXXXXXXX LSDAEASMVDEDTAMGD GD GEXXXXXXXXXXXXXXXXXXXXXXXXG RNTAS++AAKLKKKRRQAKRRNYVEFPAHEN
Sbjct:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKEVSKSGFSFRHPDAPPPFDDDKNEATXXXXXXXXXXXXXXXXXXXXLSDAEASMVDEDTAMGDAGDGGEXXXXXXXXXXXXXXXXXXXXXXXXGERNTASDVAAKLKKKRRQAKRRNYVEFPAHEN 193
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BLAST of mRNA_E-siliculosus-1a_M_contig9.16977.1 vs. uniprot
Match: D7G0M3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M3_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 1.550e-55
Identity = 149/169 (88.17%), Postives = 150/169 (88.76%), Query Frame = 0 
Query:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKELSKSGFSFRHPDAPPPFDDXXXXXXXXXXXXXXXXXXXXXXXXX-LSDAEASMVDEDTAMGDVGDAGEXXXXXXXXXXXXXXXXXXXXXXXXGGRNTASEL 168
            MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKE+SKSGFSFRHPDAPP FDD  XXXXXXXXXXXXXXXXXXXXXXX LSDAEASMVDEDTAMGD   AGE       XXXXXX    XXXXXX GGRNTASEL
Sbjct:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKEVSKSGFSFRHPDAPPLFDDDNXXXXXXXXXXXXXXXXXXXXXXXXLSDAEASMVDEDTAMGD---AGEEDAGGGPXXXXXXDGVSXXXXXXEGGRNTASEL 166
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BLAST of mRNA_E-siliculosus-1a_M_contig9.16977.1 vs. uniprot
Match: A0A835Z2D3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2D3_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.300e-19
Identity = 46/83 (55.42%), Postives = 63/83 (75.90%), Query Frame = 0 
Query:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKELSKSGFSFRHPDAPP 83
            MAKSIRSKVKKRNR +MRK  G+PH +++QA+CTA++Q++V + +G  + KLKG+L  AQA NP   E+SK   +F+HP A P
Sbjct:    1 MAKSIRSKVKKRNRADMRKQYGEPHAQQIQAKCTARLQETVQYHSGPGINKLKGLLNKAQAENPLQPEVSKHSHTFKHPYAKP 83
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JDQ5_9PHAE1.130e-7593.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0M3_ECTSI1.550e-5588.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z2D3_9STRA1.300e-1955.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 162..182
IPR019434Uncharacterised protein family UPF0642PFAMPF10338DUF2423coord: 1..41
e-value: 1.5E-8
score: 34.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:593601..596984 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.16977.1mRNA_E-siliculosus-1a_M_contig9.16977.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 592621..596984 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.16977.1 ID=prot_E-siliculosus-1a_M_contig9.16977.1|Name=mRNA_E-siliculosus-1a_M_contig9.16977.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=193bp
MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVT
KLKGMLTAAQAANPPSKELSKSGFSFRHPDAPPPFDDDDEATAPAPSPSR
NARGRTRGRARSLSDAEASMVDEDTAMGDVGDAGEGDAGGGPAGGGGGDG
VSGGAKGGEGGRNTASELAAKLKKKRRQAKRRNYVEFPAHEN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019434UPF0642