prot_E-siliculosus-1a_M_contig9.16955.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.16955.1
Unique Nameprot_E-siliculosus-1a_M_contig9.16955.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length152
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.16955.1 vs. uniprot
Match: D7FZC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZC3_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 1.300e-21
Identity = 49/62 (79.03%), Postives = 51/62 (82.26%), Query Frame = 0 
Query:   90 MDPPSPLREPNLRNTRTIHGLSLACRVQTSAFEVPRTPKTASRVQPGELHLSRRIRTIPSVA 151
            MDP   LR+PNLR  RTI GLSLACRVQTSAFEV +TPK   RVQPGELHLSRRI TIPSVA
Sbjct:    1 MDPS--LRDPNLRTIRTIQGLSLACRVQTSAFEVAQTPKIGRRVQPGELHLSRRIWTIPSVA 60
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZC3_ECTSI1.300e-2179.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:378974..379429 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.16955.1mRNA_E-siliculosus-1a_M_contig9.16955.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 378570..381917 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.16955.1 ID=prot_E-siliculosus-1a_M_contig9.16955.1|Name=mRNA_E-siliculosus-1a_M_contig9.16955.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=152bp
MVLLQRTYHNNPVVGNVVVASIIFRLFPQPMKGGVKTGLLRADLQPTRET
GATSGLLSATSCSLMPASAATSPAQSSVLTSSPASLTSGMDPPSPLREPN
LRNTRTIHGLSLACRVQTSAFEVPRTPKTASRVQPGELHLSRRIRTIPSV
A*
back to top