prot_E-siliculosus-1a_M_contig9.16933.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig9.16933.1
Unique Name	prot_E-siliculosus-1a_M_contig9.16933.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	603

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig9.16933.1 vs. uniprot
Match: D8LQX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX9_ECTSI)

HSP 1 Score: 568 bits (1464), Expect = 5.740e-196
Identity = 420/483 (86.96%), Postives = 423/483 (87.58%), Query Frame = 0

Query:   20 MQILKKLLNGPGGPAGDKMFKEKRRKGAWPGSDKEMEGNGPFPGGKGSNGDAGAATSTRGGLHKVGGQGGGGGHDAAPGEAVGIGGMPLNYGYPLGYPVGGAGGARGGYPMAGGFGGIPDFASFQHGVPGGPSIPPYXNYPQPPGGTPAGGFKGVGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQSAGMGIISGKPSGDGRNKPPSGDLGPGGXXXXXXXXXMLTLTMDKEADGPRKGAGGGSAASFPXXXXXXXXXXXXENGLKEMRDNMAAAXXXXXXXXXXXXXXXXAAEAAAGTGXXXGXXXXXXXXXXXXXXXXXXXXAGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFPPYSPTALIGGXXXXXXXXXXGVPTMEISLDGXXXXXMGAPQRGPGGSEGAGDSDGRVVGGMEIVGHQLEQWQRKMLVDDGADKFAGRELVQLDATDQ 502
            MQILKKLLNGPGG AG KMFKEKRRKGAWPGSDKEMEGNGPFPGGKGSNGDAGAATSTRGG  KVGG+GGGGGHDAAPGEAVGIGGMPLNYGYPL             YPM GGFGGIPDF+SFQHGVPGGPSIPPY NYPQPPGG PAGGFKGVGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   NQSAGMGIISGKP+GDGRNKPP GDL  GGXXXXXXXX MLTLTMDKEADGP KGAGGGSAASF XXXXXXX     ENGLKEMRDNMAAAXXXXXXXXXXXXX   AAEAA GT  XX XXXXXXXXX           AGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFPPYSPTALIGGXXXXXXX   G PTMEISLD XXXXX  APQRGPGGSEGAGDSDGRVVGGMEIVGHQLEQWQRKMLVDDG DKFAGRELVQLDATDQ
Sbjct:    1 MQILKKLLNGPGGAAGGKMFKEKRRKGAWPGSDKEMEGNGPFPGGKGSNGDAGAATSTRGGFDKVGGRGGGGGHDAAPGEAVGIGGMPLNYGYPLXXXXXXXXXXXXXYPMGGGFGGIPDFSSFQHGVPGGPSIPPYPNYPQPPGGAPAGGFKGVGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA-NQSAGMGIISGKPAGDGRNKPP-GDLDQGGXXXXXXXX-MLTLTMDKEADGPTKGAGGGSAASFLXXXXXXXKLSMDENGLKEMRDNMAAAXXXXXXXXXXXXXDASAAEAAVGTAGXXXXXXXXXXXXVDAVAGPSGAAAGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFPPYSPTALIGGXXXXXXXA--GAPTMEISLDXXXXXXXXAPQRGPGGSEGAGDSDGRVVGGMEIVGHQLEQWQRKMLVDDGTDKFAGRELVQLDATDQ 478

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig9.16933.1 vs. uniprot
Match: A0A6H5L035_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L035_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 9.840e-81
Identity = 244/441 (55.33%), Postives = 245/441 (55.56%), Query Frame = 0

Query:  224 QSAGMGIISGKPSGDGRNKPPSGDLGPGGXXXXXXXXXMLTLTMDKEADGPRKGAGGGSAASFPXXXXXXXXXXXXENGLKEMRDNMAAAXXXXXXXXXXXXXXXXAAEA------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTGXXXGXXXXXXXXXXXXXXXXXXXXAGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFPPYSPTALIGGXXXXXXXXXXGVPTMEISLDGXXXXXMGAPQRGPGGSEGAGDSDGRVVGGMEIVGHQLEQWQRKMLVDDGADKFAGRELVQLDATDQ 502
            QSAGMGIISGKPSGDGRNKPPSGDL  GGXXXXXXXXXMLTLTMDKEADGPRKGAGGGSAASF XXXXXXX     ENGLKEMRDNMAA XXXXXXXXXXXXX    AE                                                                                                                                                                   A GT  XX XXXXXXXXXXXXXXXXXX  AGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPF PYSPTALIGGXXXXXXX   G PTMEISLDG     +GAPQRGPGGSEG GDSDGRVVGGMEIVGHQLE WQRKMLVDDG DKFAGRELVQL ATDQ
Sbjct:   39 QSAGMGIISGKPSGDGRNKPPSGDLDQGGXXXXXXXXXMLTLTMDKEADGPRKGAGGGSAASFLXXXXXXXKLSMDENGLKEMRDNMAAXXXXXXXXXXXXXXDASVAETTYQLSNRPPYCNRRVWTGAPLPPFYIQLNEQTVPAKRPASEAPSDQPPPKSMAPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADNXXXXDGSGAGSKRQHFQFAYPSPAHFAQQVAVGTAGXXXXXXXXXXXXXXXXXXXXXAAAGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFLPYSPTALIGGXXXXXXXGA-GAPTMEISLDGGSGGGVGAPQRGPGGSEGVGDSDGRVVGGMEIVGHQLELWQRKMLVDDGTDKFAGRELVQLGATDQ 478

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig9.16933.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig9.16933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LQX9_ECTSI	5.740e-196	86.96	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L035_9PHAE	9.840e-81	55.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 578..598

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig9	contig	E-siliculosus-1a_M_contig9:120864..127938 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig9.16933.1	mRNA_E-siliculosus-1a_M_contig9.16933.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig9 120864..127938 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.16933.1 ID=prot_E-siliculosus-1a_M_contig9.16933.1|Name=mRNA_E-siliculosus-1a_M_contig9.16933.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=603bp
KSAKDKRDGDGGDDQTAKHMQILKKLLNGPGGPAGDKMFKEKRRKGAWPG
SDKEMEGNGPFPGGKGSNGDAGAATSTRGGLHKVGGQGGGGGHDAAPGEA
VGIGGMPLNYGYPLGYPVGGAGGARGGYPMAGGFGGIPDFASFQHGVPGG
PSIPPYPNYPQPPGGTPAGGFKGVGMGYGAPFSAPGMASNAACGAAASQQ
QEQSQAAAYAAAYAAAATTHAANQSAGMGIISGKPSGDGRNKPPSGDLGP
GGGGGGGGGGGMLTLTMDKEADGPRKGAGGGSAASFPGGGGGLLKLSMDE
NGLKEMRDNMAAAAKIVQQHHAGGGGEASAAEAAAGTGGAAGANGAEGGA
GVDAVAGPSGAAAGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQ
AYPFPPYSPTALIGGGGGGGGGSGGGVPTMEISLDGGSGGGMGAPQRGPG
GSEGAGDSDGRVVGGMEIVGHQLEQWQRKMLVDDGADKFAGRELVQLDAT
DQTPGGNEAPGGPVLGTTAAAAAAASRESDTTASSLGLTLERHQAQAPAP
APAPAPAPAPAPAPAPAATPVLTYDSLVAQQQQEFEQQEQQQRQQQEGGE
GE*