mRNA_E-siliculosus-1a_M_contig9.16933.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.16933.1 vs. uniprot
Match: D8LQX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX9_ECTSI) HSP 1 Score: 568 bits (1464), Expect = 5.740e-196 Identity = 420/483 (86.96%), Postives = 423/483 (87.58%), Query Frame = 1
Query: 58 MQILKKLLNGPGGPAGDKMFKEKRRKGAWPGSDKEMEGNGPFPGGKGSNGDAGAATSTRGGLHKVGGQGGGGGHDAAPGEAVGIGGMPLNYGYPLGYPVGGAGGARGGYPMAGGFGGIPDFASFQHGVPGGPSIPPYXNYPQPPGGTPAGGFKGVGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQSAGMGIISGKPSGDGRNKPPSGDLGPGGXXXXXXXXXMLTLTMDKEADGPRKGAGGGSAASFPXXXXXXXXXXXXENGLKEMRDNMAAAXXXXXXXXXXXXXXXXAAEAAAGTGXXXGXXXXXXXXXXXXXXXXXXXXAGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFPPYSPTALIGGXXXXXXXXXXGVPTMEISLDGXXXXXMGAPQRGPGGSEGAGDSDGRVVGGMEIVGHQLEQWQRKMLVDDGADKFAGRELVQLDATDQ 1506
MQILKKLLNGPGG AG KMFKEKRRKGAWPGSDKEMEGNGPFPGGKGSNGDAGAATSTRGG KVGG+GGGGGHDAAPGEAVGIGGMPLNYGYPL YPM GGFGGIPDF+SFQHGVPGGPSIPPY NYPQPPGG PAGGFKGVGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NQSAGMGIISGKP+GDGRNKPP GDL GGXXXXXXXX MLTLTMDKEADGP KGAGGGSAASF XXXXXXX ENGLKEMRDNMAAAXXXXXXXXXXXXX AAEAA GT XX XXXXXXXXX AGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFPPYSPTALIGGXXXXXXX G PTMEISLD XXXXX APQRGPGGSEGAGDSDGRVVGGMEIVGHQLEQWQRKMLVDDG DKFAGRELVQLDATDQ
Sbjct: 1 MQILKKLLNGPGGAAGGKMFKEKRRKGAWPGSDKEMEGNGPFPGGKGSNGDAGAATSTRGGFDKVGGRGGGGGHDAAPGEAVGIGGMPLNYGYPLXXXXXXXXXXXXXYPMGGGFGGIPDFSSFQHGVPGGPSIPPYPNYPQPPGGAPAGGFKGVGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA-NQSAGMGIISGKPAGDGRNKPP-GDLDQGGXXXXXXXX-MLTLTMDKEADGPTKGAGGGSAASFLXXXXXXXKLSMDENGLKEMRDNMAAAXXXXXXXXXXXXXDASAAEAAVGTAGXXXXXXXXXXXXVDAVAGPSGAAAGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFPPYSPTALIGGXXXXXXXA--GAPTMEISLDXXXXXXXXAPQRGPGGSEGAGDSDGRVVGGMEIVGHQLEQWQRKMLVDDGTDKFAGRELVQLDATDQ 478
BLAST of mRNA_E-siliculosus-1a_M_contig9.16933.1 vs. uniprot
Match: A0A6H5L035_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L035_9PHAE) HSP 1 Score: 273 bits (697), Expect = 9.840e-81 Identity = 244/441 (55.33%), Postives = 245/441 (55.56%), Query Frame = 1
Query: 670 QSAGMGIISGKPSGDGRNKPPSGDLGPGGXXXXXXXXXMLTLTMDKEADGPRKGAGGGSAASFPXXXXXXXXXXXXENGLKEMRDNMAAAXXXXXXXXXXXXXXXXAAEA------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTGXXXGXXXXXXXXXXXXXXXXXXXXAGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFPPYSPTALIGGXXXXXXXXXXGVPTMEISLDGXXXXXMGAPQRGPGGSEGAGDSDGRVVGGMEIVGHQLEQWQRKMLVDDGADKFAGRELVQLDATDQ 1506
QSAGMGIISGKPSGDGRNKPPSGDL GGXXXXXXXXXMLTLTMDKEADGPRKGAGGGSAASF XXXXXXX ENGLKEMRDNMAA XXXXXXXXXXXXX AE A GT XX XXXXXXXXXXXXXXXXXX AGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPF PYSPTALIGGXXXXXXX G PTMEISLDG +GAPQRGPGGSEG GDSDGRVVGGMEIVGHQLE WQRKMLVDDG DKFAGRELVQL ATDQ
Sbjct: 39 QSAGMGIISGKPSGDGRNKPPSGDLDQGGXXXXXXXXXMLTLTMDKEADGPRKGAGGGSAASFLXXXXXXXKLSMDENGLKEMRDNMAAXXXXXXXXXXXXXXDASVAETTYQLSNRPPYCNRRVWTGAPLPPFYIQLNEQTVPAKRPASEAPSDQPPPKSMAPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADNXXXXDGSGAGSKRQHFQFAYPSPAHFAQQVAVGTAGXXXXXXXXXXXXXXXXXXXXXAAAGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFLPYSPTALIGGXXXXXXXGA-GAPTMEISLDGGSGGGVGAPQRGPGGSEGVGDSDGRVVGGMEIVGHQLELWQRKMLVDDGTDKFAGRELVQLGATDQ 478 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16933.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig9.16933.1 >prot_E-siliculosus-1a_M_contig9.16933.1 ID=prot_E-siliculosus-1a_M_contig9.16933.1|Name=mRNA_E-siliculosus-1a_M_contig9.16933.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=603bp KSAKDKRDGDGGDDQTAKHMQILKKLLNGPGGPAGDKMFKEKRRKGAWPGback to top mRNA from alignment at E-siliculosus-1a_M_contig9:120864..127938+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig9.16933.1 ID=mRNA_E-siliculosus-1a_M_contig9.16933.1|Name=mRNA_E-siliculosus-1a_M_contig9.16933.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7075bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:120864..127938+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:120864..127938+ >mRNA_E-siliculosus-1a_M_contig9.16933.1 ID=mRNA_E-siliculosus-1a_M_contig9.16933.1|Name=mRNA_E-siliculosus-1a_M_contig9.16933.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3618bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:120864..127938+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |