prot_E-siliculosus-1a_M_contig9.16927.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.16927.1
Unique Nameprot_E-siliculosus-1a_M_contig9.16927.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length144
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig9.16927.1 vs. uniprot
Match: A0A6H5LDX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDX5_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 7.500e-52
Identity = 125/137 (91.24%), Postives = 126/137 (91.97%), Query Frame = 0 
Query:    6 GNTGTAAPASHLTEASSTMVLPGNLSSTASFVLSPASREAQQQHVELQLPAKLGGXXXXXXXXXXXXXXX-LAAAEAAPLGRMDLRGGAGAGPAAPFMANFDRALSENTSSSDEGGEDDLNLAAAGXDGGGKDSAGT 141
            GNTGTAAPASHLTEASSTMVLP NLSSTASFVLSPASREA+QQHVELQLPAKLGGXXXXXXXXXXXX    LA AEAAPLGRMDLRGGAGAGPAAPFMANFDRALSENTSSSDEGGEDDLNLAAAG    G DSAGT
Sbjct: 1864 GNTGTAAPASHLTEASSTMVLPENLSSTASFVLSPASREAKQQHVELQLPAKLGGXXXXXXXXXXXXDGRGLAVAEAAPLGRMDLRGGAGAGPAAPFMANFDRALSENTSSSDEGGEDDLNLAAAG----GNDSAGT 1996
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BLAST of mRNA_E-siliculosus-1a_M_contig9.16927.1 vs. uniprot
Match: D8LQY7_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY7_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 1.440e-42
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0 
Query:    7 NTGTAAPASHLTEASSTMVLPGNLSSTASFVLSPASREAQQQHVELQLPAKLGGXXXXXXXXXXXXXXX-LAAAEAAPLGRMDLRGGAGAGPAAPFMANFDRALSENTSSS 116
            NTGTAAPASHLTEASSTMVLPGNLSSTASFVLSPASREAQQQHVELQLPAKLG XXXXXXXXXXXXXXX LAAAEAAPLGRMDLRGGAGAGPAAPFMANFDRALSENTSSS
Sbjct: 1256 NTGTAAPASHLTEASSTMVLPGNLSSTASFVLSPASREAQQQHVELQLPAKLGXXXXXXXXXXXXXXXXXLAAAEAAPLGRMDLRGGAGAGPAAPFMANFDRALSENTSSS 1366
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LDX5_9PHAE7.500e-5291.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQY7_ECTSI1.440e-4298.20TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:41565..41996 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.16927.1mRNA_E-siliculosus-1a_M_contig9.16927.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 41565..41998 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.16927.1 ID=prot_E-siliculosus-1a_M_contig9.16927.1|Name=mRNA_E-siliculosus-1a_M_contig9.16927.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=144bp
NNTGGGNTGTAAPASHLTEASSTMVLPGNLSSTASFVLSPASREAQQQHV
ELQLPAKLGGGGGAREDDGGGDGRRLAAAEAAPLGRMDLRGGAGAGPAAP
FMANFDRALSENTSSSDEGGEDDLNLAAAGGDGGGKDSAGTAKG
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