prot_E-siliculosus-1a_M_contig9.16926.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.16926.1
Unique Nameprot_E-siliculosus-1a_M_contig9.16926.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length122
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig9.16926.1 vs. uniprot
Match: A0A6H5LDX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDX5_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 1.190e-40
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0 
Query:   37 SGGDTSDTSVAGGDVSSLHGDEAPSVPGGGVYGSRQHCDAFADNSDHSDDDGGGNTNVWSDGVFESSGNSTPGAAGRVRA 116
            SGGDTSDTSVAGG+VSSLHGDE PS+PGGGVYGSRQHCDAFADNSDHSDDDGGGNTNVWSDGVFESSGNSTPGAAGRVRA
Sbjct: 1643 SGGDTSDTSVAGGEVSSLHGDEVPSIPGGGVYGSRQHCDAFADNSDHSDDDGGGNTNVWSDGVFESSGNSTPGAAGRVRA 1722
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BLAST of mRNA_E-siliculosus-1a_M_contig9.16926.1 vs. uniprot
Match: D8LQY7_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY7_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 7.590e-40
Identity = 104/111 (93.69%), Postives = 106/111 (95.50%), Query Frame = 0 
Query:    7 SGDGTSSSSFSXXXXXXXXXXXXXXXXXXGSGGDTSDTSVAGGDVSSLHGDEAPSVPGGGVYGSRQHCDAFADNSDHSDDDGGGNTNVWSDGVFESSGNSTPGAAGRVRAA 117
            SGDGTSSSS  XXXXXXXXXXXXXXXXXX SGGDTSDTSVAGG+VSSLHGDEAPS+PGG VYGSRQHCDAFADNSDHSDD GGGNTNVWSDGVFESSGNSTPGAAGRVRAA
Sbjct:  986 SGDGTSSSSXXXXXXXXXXXXXXXXXXXXXSGGDTSDTSVAGGEVSSLHGDEAPSIPGGRVYGSRQHCDAFADNSDHSDD-GGGNTNVWSDGVFESSGNSTPGAAGRVRAA 1095
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LDX5_9PHAE1.190e-4096.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQY7_ECTSI7.590e-4093.69TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:40815..41180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.16926.1mRNA_E-siliculosus-1a_M_contig9.16926.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 40815..41180 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.16926.1 ID=prot_E-siliculosus-1a_M_contig9.16926.1|Name=mRNA_E-siliculosus-1a_M_contig9.16926.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=122bp
SYSSSDSGDGTSSSSFSSSSLWSSSTVFSGSRPTSGSGGDTSDTSVAGGD
VSSLHGDEAPSVPGGGVYGSRQHCDAFADNSDHSDDDGGGNTNVWSDGVF
ESSGNSTPGAAGRVRAAATAAA
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