prot_E-siliculosus-1a_M_contig9.16925.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig9.16925.1
Unique Name	prot_E-siliculosus-1a_M_contig9.16925.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	1102

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig9.16925.1 vs. uniprot
Match: D8LQY7_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY7_ECTSI)

HSP 1 Score: 1205 bits (3117), Expect = 0.000e+0
Identity = 752/931 (80.77%), Postives = 756/931 (81.20%), Query Frame = 0

Query:    1 MIGWAKAAGTGGTLEGRRQRGLPPPSPLFSMSNQTSVFTPGAGTPRFMTALVSGSGXXXXXXXXWRRGEWGGGERLPSASSAMKTMEASGSNARSARRKSKGMGQASLSMWCNRAGGLNGPLSSVGRDTRGRFFWAGGATPAAXXXXXXXXXXXXRSTSTSSPNSRGSLLGGAGGPLPTALSGVNRGFNGGFWDSFSTAGSGFCSSGQFSQSFWGPGYGNGSARXXXXXXXXXXXXXXXXXXXXXGVPYVDHGSGYRFGSGSVGYAGGGDDGAXXVXXXXGVTRPSAKPNKPTAXXXXXXXXXPGTTXXXXADGRAVGGAAAAGLARRPLGGAADGERGTAASRPTSRGSSKGKGRRXXXXXXXXXXXXWEAPAAGGAAATATEEGKDGMTVAEAVERGRERERARAWEAEVEWRSALPARLEALAKLASMERIGEEPSELRKAWMWNDRPGVAKMLNDVADSMAAAGFHDQAADLFERCVEIYLAYTGPEGHGEIAEALNDLGYVLWDACANPVFIGQDVAEDMACTLMANAEEVFRLALFECGSCPGGDHPFAATCLSNLADCASARLAHEEATLLCQWALHVREECLGPKHLDTADTLRKLGGLLHRQGLLEEARVNYLRXXXXXXXXXXXXXXXXXXXXXXXAVVVGEQGDYLTAENYHRLALEQRRKAGACGPDDFAPFCYNLALVVGTNARKGPPEKLDQGHREAKALMTEALMVYQRSLPPDHPETADCMDKLAAAVAMTGDLTGAEILHREXXXXXXXXXXXXXXXXXEVLFNLSAVVGAQRGRLGETENILRRCLEAQERLHGPDHPEVDLVLGKLHDIIRARDAVSICHSNSHSSSDRIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYNPLTASRRNGMSPSSWWEFDSVTSAGGSSLFGSLPNSRGRNGFFASGG 931
            MIG AK AGTGG+ E RRQRGLPPPSPLFSMSNQTSVFTPGAGTPRFMTALVSGSGXXXXXXXXWRRGEWGGGERLPSASSAMKTMEASGSNARSARRKSKG                NGPLSSVGRDTRGRFFWAGGATPAA  XXXXXXXX  RSTSTSSPNSRGSLLGGA GPLPTALSGVNRGFNGGFWDSFSTAGSGFCSSGQFSQSFWGPGYGNGS  XXXXXXXXXXXXXXXXXXXXXGVPYVD GSGYRFGSGSVGYA                            XXXXXXX   GTT    ADGRAVGG AAAGLARRPLGGAADG+RGTAASRPTSRGSSKGKGRRXXXXXXXXXXXX           TATEEGKDGMTVAEA+ERGRERE   AWEAEVEWRSALPARLEALAKLASMERIGEEPSELRKAWMWNDRPGVAKMLNDVADSMAAAGFHDQAADLFERCVEIYL YTGPEGHGEIAEALNDLGYVLWDACANPVFIGQDVAEDMACTLMANAEEVFRLALFECGSCPGGDHPFAATCLSNLADCASARLAHEEATLLCQWALHVREECLGPK LDTADTLRKLGGLLHRQGLLEEARVNYLR                       AVVVGEQGDYLTAENYHRLALEQRRKAGACGPDDFAPFCYNLALVVGTNARKGPPEKLDQGHREAKALMTEALMVYQRSLPPDHPETADCMDKLAAAVAMTGDLTGAEILHREXXXXXXXXXXXXXXXXX VLFNLSAVVGAQRGRLGETENILRRCLEAQERLHGPDHPEVDLVLGKLHDIIR                                                                       FDSVTSAGGSSLFGS+PNSRGRNGFFASGG
Sbjct:    4 MIGSAKVAGTGGS-EARRQRGLPPPSPLFSMSNQTSVFTPGAGTPRFMTALVSGSGXXXXXXXXWRRGEWGGGERLPSASSAMKTMEASGSNARSARRKSKG----------------NGPLSSVGRDTRGRFFWAGGATPAAGGXXXXXXXXP-RSTSTSSPNSRGSLLGGARGPLPTALSGVNRGFNGGFWDSFSTAGSGFCSSGQFSQSFWGPGYGNGSVLXXXXXXXXXXXXXXXXXXXXXGVPYVDQGSGYRFGSGSVGYA--------------------------XXXXXXXXXCGWGTTTA--ADGRAVGGEAAAGLARRPLGGAADGKRGTAASRPTSRGSSKGKGRRXXXXXXXXXXXXXXXXXXXXXX-TATEEGKDGMTVAEAMERGREREXXXAWEAEVEWRSALPARLEALAKLASMERIGEEPSELRKAWMWNDRPGVAKMLNDVADSMAAAGFHDQAADLFERCVEIYLVYTGPEGHGEIAEALNDLGYVLWDACANPVFIGQDVAEDMACTLMANAEEVFRLALFECGSCPGGDHPFAATCLSNLADCASARLAHEEATLLCQWALHVREECLGPKDLDTADTLRKLGGLLHRQGLLEEARVNYLRARDVFVEVLGPDHEDVGSALNLLAVVVGEQGDYLTAENYHRLALEQRRKAGACGPDDFAPFCYNLALVVGTNARKGPPEKLDQGHREAKALMTEALMVYQRSLPPDHPETADCMDKLAAAVAMTGDLTGAEILHREXXXXXXXXXXXXXXXXXXVLFNLSAVVGAQRGRLGETENILRRCLEAQERLHGPDHPEVDLVLGKLHDIIR-----------------------------------------------------------------------FDSVTSAGGSSLFGSVPNSRGRNGFFASGG 816

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig9.16925.1 vs. uniprot
Match: A0A6H5LDX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDX5_9PHAE)

HSP 1 Score: 1133 bits (2931), Expect = 0.000e+0
Identity = 794/1176 (67.52%), Postives = 804/1176 (68.37%), Query Frame = 0

Query:    1 MIGWAKAAGTGGTLEGRRQRGLPPPSPLFSMSNQTSVFTPGAGTPRFMTALVSGSGXXXXXXXX---WRRGEWGGGERLPSASSAMKTMEASGSNARSARRKSKGMGQASLSMWCNRAGGLNGPLSSVGRDTRGRFFWAGGATPAAXXXXXXXXXXXXRSTSTSSPNSRGSLLGGAGGPLPTALSGVNRGFNGGFWDSFSTAGSGFCSSGQFSQSFWGPGYGNG------SARXXXXXXXXXXXXXXXXXXXXXGVPYVDHGSGYRFGSGSVGYAG------------------------------------------------------------------------------------------------------GG---------------------------------------DDGAXXVXXXXGVTRPSAKPNKPTAXXXXXXXXX----PGTTXXXXADGRAVGGAAAAGLARRPLGGAADGERGTAASRPTSRGSSKGKGRRXXXXXXXXXXXXWEAPAAGGAAATATEEGKDGMTVAEAVERGRERERARAWEAEVEWRSALPARLEALAKLASMERIGE-------------------------EPSELRKAWMWNDRPGVAKMLNDVADSMAAAGFHDQAADLFERCVEIYLAYTGPEGHGEIAEALNDLGYVLWDACANPVFIGQDVAEDMACTLMANAEEVFRLALFECGSCPGGDHPFAATCLSNLADCA-------------------------------------------------------------------SARLAHEEATLLCQWALHVREECLGPKHLDTADTLRKLGGLLHRQGLLEEARVNYLRXXXXXXXXXXXXXXXXXXXXXXXAVVVGEQGDYLTAENYHRLALEQRRKAGACGPDDFAPFCYNLALVVGTNARKGPPEKLDQGHREAKALMTEALMVYQRSLPPDHPETADCMDKLAAAVAMTGDLTGAEILHREXXXXXXXXXXXXXXXXXEVLFNLSAVVGAQRGRLGETENILRRCLEAQERLHGPDHPEVDLVLGKLHDIIRARDAVSICHSNSHSSSDRIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYNPLTASRRNGMSPSSWWEFDSVTSAGGSSLFGSLPNSRGRNGFFASG 930
            MIG AKAAGTGGT EGRRQRGLPPPSPLFSMSNQTSVFTPGAGTPRFMTALVSG  XXXXXXXX   WRRGEWGGGERLPSASSAMKTMEASGSNARSARRKSKGMGQASLS        +NGPLSSVGRDT+G+FFWAGGATPAA XXXXXXXXX  RSTSTSSPNSRGSLLG AGGPLPTALSGVNRGFNGGFWDSFSTAGSGFCSSGQ+SQSFWGPGY         SAR  XXXXXXXXXXXXXXXXXX GVP+VD GSGYRF SG+VGYAG                                                                                                      GG                                       DDGA  V    GV RP AKPNKPTA XXXXXXXX    PGTTXXXX D RAVGG AAAGLARRPLGGAADGERGTAAS PTSRGSSKGK   XXXXXXXXXXXX              E+GK+GMTVAEAV RGR      AWEAEVEWRSALPARLEALAKLASMERIGE                         EPSELRKAWMWNDRPGVAKMLNDVADSMAAAGFHDQAADLFERCVEIYLAYTGPEGHGEIAEALNDLGYVLWDACANPVFIGQDVAEDMACTLMANAEEVFRLALFECGSCPGGDHPFAATCLSNLADCA                                                                   SARLAHEEATLLCQWALHVREECLGPKHLDTADTLRKLGGLLHRQGLLEEARVNYLR                       AVVVGEQGDYLTAENYHRLALEQRRKAGACGPDDFAPFCYNLALVVGTNARKGPPEKLDQGHREAKALMTEALMVYQRSLPPDHPETADCMDKLAAAVAMTGDLTGAEILHRE      XXXXXXXX   EVLFNLSAVVGAQRGRLGETENILR                     GKLHDIIRARDAVSICHSN+  S     XXXXXXXXXXXXXXXXXXXXXXXXXXX     YNPLTASRRNGMSPSSWWEFDSVTSAGGSSLFGS+PNSRGRNGFFASG
Sbjct:   67 MIGSAKAAGTGGTQEGRRQRGLPPPSPLFSMSNQTSVFTPGAGTPRFMTALVSGXXXXXXXXXXXXXWRRGEWGGGERLPSASSAMKTMEASGSNARSARRKSKGMGQASLSY-------VNGPLSSVGRDTKGKFFWAGGATPAAGXXXXXXXXXP-RSTSTSSPNSRGSLLGVAGGPLPTALSGVNRGFNGGFWDSFSTAGSGFCSSGQYSQSFWGPGYXXXXXXXXXSARYGXXXXXXXXXXXXXXXXXXAGVPHVDQGSGYRFSSGNVGYAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKARSRVADPDSYRSGGGAAVVGGIPPLPTPAXXXXXXXXXXXXXXGKLQRRKNGRPPPAPAEDDGAGGVEI--GV-RPLAKPNKPTAAXXXXXXXXXXXXPGTTXXXXGD-RAVGGEAAAGLARRPLGGAADGERGTAASWPTSRGSSKGKXXXXXXXXXXXXXXXXXXXXXXXX--XXXEKGKEGMTVAEAVGRGRXXXXXXAWEAEVEWRSALPARLEALAKLASMERIGEGAFGQVGLTSCLRCLMLAVLPVVAAEPSELRKAWMWNDRPGVAKMLNDVADSMAAAGFHDQAADLFERCVEIYLAYTGPEGHGEIAEALNDLGYVLWDACANPVFIGQDVAEDMACTLMANAEEVFRLALFECGSCPGGDHPFAATCLSNLADCARLTWLTRHAALPPXXXXXXXXXRRAECLWSEEFFEISVVCAKYCSPPSPSPSPPCLLQPETTHSKIQSARLAHEEATLLCQWALHVREECLGPKHLDTADTLRKLGGLLHRQGLLEEARVNYLRACDVFVEVLGPDHEDVGSALNLLAVVVGEQGDYLTAENYHRLALEQRRKAGACGPDDFAPFCYNLALVVGTNARKGPPEKLDQGHREAKALMTEALMVYQRSLPPDHPETADCMDKLAAAVAMTGDLTGAEILHREALSSMEXXXXXXXXRIAEVLFNLSAVVGAQRGRLGETENILRXXXXXXXXXXXXXXXXXXXXXGKLHDIIRARDAVSICHSNNSHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----YNPLTASRRNGMSPSSWWEFDSVTSAGGSSLFGSVPNSRGRNGFFASG 1223

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig9.16925.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig9.16925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LQY7_ECTSI	0.000e+0	80.77	TPR repeat-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5LDX5_9PHAE	0.000e+0	67.52	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 598..631 e-value: 64.0 score: 7.9 coord: 556..589 e-value: 80.0 score: 7.0 coord: 640..673 e-value: 26.0 score: 11.2
None	No IPR available	PFAM	PF13374	TPR_10	coord: 788..817 e-value: 2.5E-6 score: 27.2
None	No IPR available	PFAM	PF13424	TPR_12	coord: 596..672 e-value: 5.4E-13 score: 49.0 coord: 708..765 e-value: 4.4E-7 score: 30.1
None	No IPR available	PANTHER	PTHR45783:SF3	KINESIN LIGHT CHAIN	coord: 753..823 coord: 532..671 coord: 632..770
None	No IPR available	PANTHER	PTHR45783	FAMILY NOT NAMED	coord: 532..671
None	No IPR available	PANTHER	PTHR45783	FAMILY NOT NAMED	coord: 753..823 coord: 632..770
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 527..697 e-value: 5.3E-31 score: 109.7 coord: 402..511 e-value: 5.6E-7 score: 30.8 coord: 703..867 e-value: 3.3E-24 score: 87.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 550..691
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 709..826

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig9	contig	E-siliculosus-1a_M_contig9:30961..39813 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig9.16925.1	mRNA_E-siliculosus-1a_M_contig9.16925.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig9 30955..42900 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.16925.1 ID=prot_E-siliculosus-1a_M_contig9.16925.1|Name=mRNA_E-siliculosus-1a_M_contig9.16925.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1102bp
MIGWAKAAGTGGTLEGRRQRGLPPPSPLFSMSNQTSVFTPGAGTPRFMTA
LVSGSGGGGGGGGGWRRGEWGGGERLPSASSAMKTMEASGSNARSARRKS
KGMGQASLSMWCNRAGGLNGPLSSVGRDTRGRFFWAGGATPAAGGGGAGA
AAATPRSTSTSSPNSRGSLLGGAGGPLPTALSGVNRGFNGGFWDSFSTAG
SGFCSSGQFSQSFWGPGYGNGSARYGSGMVGGGDGSAGGKMGSAAGVPYV
DHGSGYRFGSGSVGYAGGGDDGAGGVGVGIGVTRPSAKPNKPTAAAAAPS
PSPPGTTTAAAADGRAVGGAAAAGLARRPLGGAADGERGTAASRPTSRGS
SKGKGRRGRAGARGGAGGAWEAPAAGGAAATATEEGKDGMTVAEAVERGR
ERERARAWEAEVEWRSALPARLEALAKLASMERIGEEPSELRKAWMWNDR
PGVAKMLNDVADSMAAAGFHDQAADLFERCVEIYLAYTGPEGHGEIAEAL
NDLGYVLWDACANPVFIGQDVAEDMACTLMANAEEVFRLALFECGSCPGG
DHPFAATCLSNLADCASARLAHEEATLLCQWALHVREECLGPKHLDTADT
LRKLGGLLHRQGLLEEARVNYLRARDVFVEVLGPGHEDVGSALNLLAVVV
GEQGDYLTAENYHRLALEQRRKAGACGPDDFAPFCYNLALVVGTNARKGP
PEKLDQGHREAKALMTEALMVYQRSLPPDHPETADCMDKLAAAVAMTGDL
TGAEILHREALSSMERTLSQDDPRIAEVLFNLSAVVGAQRGRLGETENIL
RRCLEAQERLHGPDHPEVDLVLGKLHDIIRARDAVSICHSNSHSSSDRIV
ISSHHMNSPANNNNNNNNNTGGGGGGGGPPSSYNPLTASRRNGMSPSSWW
EFDSVTSAGGSSLFGSLPNSRGRNGFFASGGGGGGRGPKPRVSPHGFGSG
SGDGKAAAAAAGGRRSLDPPRRKRLRQLQRPEQRRRRWWSGGQRGPPPQE
RRRRRRPGRHRERRRYPGGGHRAGLFGGGWTAATRGGRGSFCGAPFFFFP
QGRRHAGRDSDRPRVRVGAVDAEEEEQRRVGLPEGAPGVVLRDVQQGQQP
A*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR019734	TPR_repeat