prot_E-siliculosus-1a_M_contig89.16902.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig89.16902.1
Unique Nameprot_E-siliculosus-1a_M_contig89.16902.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length208
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16902.1 vs. uniprot
Match: A0A6H5KJN5_9PHAE (DUF2451 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN5_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 1.760e-65
Identity = 120/146 (82.19%), Postives = 125/146 (85.62%), Query Frame = 0 
Query:    2 GGEELEAEEQRYGSGWVVTQASLNGVARYAGHALQIMALVRPAAPSAFEGLRQLVDLYLYCALTLFCPQWAID--ALYGFGDEELVPTPEEQEGLTALKSFLSRVSHDLSNPKPAANTGNNNGDGSRETSPAHSPERSSSTGGKDG 145
            GGEELEAEEQRYGSGWVVTQASLNGVARYAGHALQIMALVRPAAPSAF GLRQLVDLYLYCALTLFCP+WAID  +          P   ++ G TALKSFLSRVSHDLSNPK AA +GNNNGDGSRETSPAHSPERSSS GGKDG
Sbjct:   84 GGEELEAEEQRYGSGWVVTQASLNGVARYAGHALQIMALVRPAAPSAFGGLRQLVDLYLYCALTLFCPEWAIDGPSTASATRSWCRPRRSKRRGFTALKSFLSRVSHDLSNPKSAAGSGNNNGDGSRETSPAHSPERSSSAGGKDG 229
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16902.1 vs. uniprot
Match: A0A836CNI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNI9_9STRA)

HSP 1 Score: 112 bits (279), Expect = 6.510e-25
Identity = 55/96 (57.29%), Postives = 63/96 (65.62%), Query Frame = 0 
Query:    9 EEQRYGSGWVVTQASLNGVARYAGHALQIMALVRPAAPSAFEGLRQLVDLYLYCALTLFCPQWAIDALYGFGDEELVPTPEEQEGLTALKSFLSRV 104
            E  RYGS WVVTQA+LNG+ARY GH LQ+M L+RP A  AF GL  L DLYLYC  TLF P   +  LYG G+E  +P   EQE    LK F+ RV
Sbjct: 1281 EVDRYGSKWVVTQAALNGIARYTGHYLQMMTLLRPVAGDAFRGLCGLADLYLYCVFTLFAPPARVAGLYGVGEERHMPLVSEQEEFVDLKDFMQRV 1376
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig89.16902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJN5_9PHAE1.760e-6582.19DUF2451 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CNI9_9STRA6.510e-2557.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig89contigE-siliculosus-1a_M_contig89:545362..548467 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig89.16902.1mRNA_E-siliculosus-1a_M_contig89.16902.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig89 545362..548467 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig89.16902.1 ID=prot_E-siliculosus-1a_M_contig89.16902.1|Name=mRNA_E-siliculosus-1a_M_contig89.16902.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=208bp
GGGEELEAEEQRYGSGWVVTQASLNGVARYAGHALQIMALVRPAAPSAFE
GLRQLVDLYLYCALTLFCPQWAIDALYGFGDEELVPTPEEQEGLTALKSF
LSRVSHDLSNPKPAANTGNNNGDGSRETSPAHSPERSSSTGGKDGNASSS
RTPTTGDGDERRRRSSSGATRSAARRRGRSAAAPSPTATATAANSEAEGM
EREAAVST
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