prot_E-siliculosus-1a_M_contig89.16877.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig89.16877.1
Unique Nameprot_E-siliculosus-1a_M_contig89.16877.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length240
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig89.16877.1 vs. uniprot
Match: D8LSK3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK3_ECTSI)

HSP 1 Score: 378 bits (970), Expect = 2.040e-131
Identity = 202/210 (96.19%), Postives = 205/210 (97.62%), Query Frame = 0
Query:   31 MQATCIALLCAVVAMITCVEGFSTRPSLHTHRATTTASRSFQASRAGGRRSSQTRMFFDFGKKTESNARPMAGGTVKGGKKTKITQEVTPAQRRAQDKATAIRERSRKAA-RKSEGVFTPPQQFEAFKKARKEVPSGKGDAYWEKIAARVPGQNAAACKRVAESMLFEAAVGTKSNYFGGYIETIETPDYVDPEADIMFKINKLFGRGKK 239
            MQATCIALLCAVVAMITCVEGFSTRPSLHTHRA TTASRS QASRAG RRSSQTRMFFDFGKKTESNARPMAGGTVKGGKKTKITQ+VTPAQRRAQ+KATAIRERSRKA+ RKSEGVFTPP QFEAFKKARKEVPSGKGDAYWEKIAARVPGQNAAACKRVAESMLFEAAVGTKSNYFGGYIETIETPDYVDPEADIMFKINKLFGRGKK
Sbjct:    1 MQATCIALLCAVVAMITCVEGFSTRPSLHTHRAATTASRSLQASRAGSRRSSQTRMFFDFGKKTESNARPMAGGTVKGGKKTKITQDVTPAQRRAQEKATAIRERSRKASTRKSEGVFTPP-QFEAFKKARKEVPSGKGDAYWEKIAARVPGQNAAACKRVAESMLFEAAVGTKSNYFGGYIETIETPDYVDPEADIMFKINKLFGRGKK 209          
BLAST of mRNA_E-siliculosus-1a_M_contig89.16877.1 vs. uniprot
Match: A0A835YZY5_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY5_9STRA)

HSP 1 Score: 127 bits (319), Expect = 7.680e-33
Identity = 78/163 (47.85%), Postives = 106/163 (65.03%), Query Frame = 0
Query:   84 TRMFFDFGKKTESNA---RPMAGGTVKGGKKTKITQEVT---PA-QRRAQDKATAIRERSRKAARKSEGVFTPPQQFEAFKKARKEVPSGKGDAYWEKIAARVPGQNAAACKRVAESMLFEAAVGTKSNYFGGYIETIETPDYVDPEADIMFKINKLFGRGKK 239
            T+M F  G    ++A   RP AG T KG KKT +  + +   PA +RR + +A A ++ + KAA    GVF+P +Q+E F  AR  VPSG  + YW++IA +VPGQNA  CK++A  +LFE A GTK N+FGGY+ETIE  DYVD +AD+M K+  +F  GKK
Sbjct:   44 TQMVFKLGPPKATSAASSRPTAGATTKGLKKTPVASDSSWNGPAVERRRKAQAIAAKKAAEKAA--EAGVFSP-EQYEKFLDARATVPSGASN-YWQRIADKVPGQNAENCKKMASQLLFEKAAGTKKNFFGGYVETIEVKDYVDEDADVMGKLANMFSFGKK 202          
BLAST of mRNA_E-siliculosus-1a_M_contig89.16877.1 vs. uniprot
Match: A0A835YSA5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSA5_9STRA)

HSP 1 Score: 119 bits (297), Expect = 8.490e-30
Identity = 69/139 (49.64%), Postives = 96/139 (69.06%), Query Frame = 0
Query:   96 SNARPMAGGTVKGGKKTKITQEVT---PA-QRRAQDKATAIRERSRKAARKSEGVFTPPQQFEAFKKARKEVPSGKGDAYWEKIAARVPGQNAAACKRVAESMLFEAAVGTKSNYFGGYIETIETPDYVDPEADIMFKI 230
            +++RP AG T KG KKT +  + +   PA +RR + +A A ++ + KAA    GVF+P +Q+E F  AR  VPSG  + YW++IA +VPGQNA  CK++A  +LFE A GTK N+FGGY+ETIE  DYVD +AD+M K+
Sbjct:   14 ASSRPTAGATTKGLKKTPVASDSSWNGPAVERRRKAQAIAAKKAAEKAA--EAGVFSP-EQYEKFLDARATVPSGASN-YWQRIADKVPGQNAENCKKMASQLLFEKAAGTKKNFFGGYVETIEVKDYVDEDADVMGKL 148          
BLAST of mRNA_E-siliculosus-1a_M_contig89.16877.1 vs. uniprot
Match: A0A7S2X777_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X777_9EUKA)

HSP 1 Score: 70.9 bits (172), Expect = 4.820e-11
Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = 0
Query:  146 VFTPPQQFEAFKKARKEVPSGKGDAYWEKIAARV-PGQNAAACKRVAESMLFEAAVGTKSNYFGGYI----ETIETPDYVDPEADIMFKINKLFG 235
            VFT  +Q   F +ARKE+PSG GDAYW+K+A RV  G  A  CKR+A++ LF+ A GT SN+F  ++    E +E+    +  AD M ++   +G
Sbjct:   91 VFTD-KQVARFLQARKELPSGSGDAYWQKVADRVGDGITAYECKRLAQNQLFKKAAGTSSNFFKNFVDVKGEYVESGYVDETAADPMTQMKNFWG 184          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig89.16877.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LSK3_ECTSI2.040e-13196.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YZY5_9STRA7.680e-3347.85Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835YSA5_9STRA8.490e-3049.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2X777_9EUKA4.820e-1143.16Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..239
NoneNo IPR availableTMHMMTMhelixcoord: 30..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig89contigE-siliculosus-1a_M_contig89:222442..225553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig89.16877.1mRNA_E-siliculosus-1a_M_contig89.16877.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig89 222442..225553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig89.16877.1 ID=prot_E-siliculosus-1a_M_contig89.16877.1|Name=mRNA_E-siliculosus-1a_M_contig89.16877.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=240bp
RVSGQPPSQLTLCATLHLFSALFSFKNWTTMQATCIALLCAVVAMITCVE
GFSTRPSLHTHRATTTASRSFQASRAGGRRSSQTRMFFDFGKKTESNARP
MAGGTVKGGKKTKITQEVTPAQRRAQDKATAIRERSRKAARKSEGVFTPP
QQFEAFKKARKEVPSGKGDAYWEKIAARVPGQNAAACKRVAESMLFEAAV
GTKSNYFGGYIETIETPDYVDPEADIMFKINKLFGRGKK*
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