prot_E-siliculosus-1a_M_contig88.16843.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig88.16843.1
Unique Nameprot_E-siliculosus-1a_M_contig88.16843.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length244
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16843.1 vs. uniprot
Match: A0A6H5KJG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJG0_9PHAE)

HSP 1 Score: 330 bits (847), Expect = 2.050e-111
Identity = 199/230 (86.52%), Postives = 208/230 (90.43%), Query Frame = 0 
Query:    1 MLGAPLIGGG-----GSGSASYDALFQGLVGSGCIAGLALLDASRGRPLYENRLDDRLPRPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKDNKDDEMEVVGARGGGEGPGHRYGLVSSSEGQRLVAAVKNLTDDNDALLCRQQEEQPLTCMGVPFRVFGGTPLGIYAVGPGRRVGLIVRALPRVGFLVVVYRRPHLPQKVVGEVERFVDDFWAGTQGRAVRSPLP 225
            MLGAPL  GG     GSGSASYDALFQGLVGSGCIAGLALLDASRGRPLYENRLDDRLPRPPXXXXXXXXXXXXXXXXXXXXXX          +DNK+D  EVVGARGGGEGPG R GLVSSSEGQRLVAAVK+LTDD+DA+ CR+QEEQPLTCMGVPFRVFGGTPLGIYAVGPGRRVGL+VRALPRVGFLVVVYRRPHLPQ+VVGEVE+FVDDFWAGTQGRAVRSPLP
Sbjct:   65 MLGAPLTSGGXXXXAGSGSASYDALFQGLVGSGCIAGLALLDASRGRPLYENRLDDRLPRPPXXXXXXXXXXXXXXXXXXXXXX----------EDNKNDGKEVVGARGGGEGPGQRDGLVSSSEGQRLVAAVKSLTDDDDAI-CRKQEEQPLTCMGVPFRVFGGTPLGIYAVGPGRRVGLVVRALPRVGFLVVVYRRPHLPQQVVGEVEKFVDDFWAGTQGRAVRSPLP 283
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig88.16843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJG0_9PHAE2.050e-11186.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..243
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig88contigE-siliculosus-1a_M_contig88:567870..574085 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig88.16843.1mRNA_E-siliculosus-1a_M_contig88.16843.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig88 567867..574085 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig88.16843.1 ID=prot_E-siliculosus-1a_M_contig88.16843.1|Name=mRNA_E-siliculosus-1a_M_contig88.16843.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=244bp
MLGAPLIGGGGSGSASYDALFQGLVGSGCIAGLALLDASRGRPLYENRLD
DRLPRPPPAAGAAAAATATAAAAAAATAAGAATATAAARKDNKDDEMEVV
GARGGGEGPGHRYGLVSSSEGQRLVAAVKNLTDDNDALLCRQQEEQPLTC
MGVPFRVFGGTPLGIYAVGPGRRVGLIVRALPRVGFLVVVYRRPHLPQKV
VGEVERFVDDFWAGTQGRAVRSPLPPPPPPPPPPPPRSSSTRR*
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