prot_E-siliculosus-1a_M_contig88.16818.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig88.16818.1
Unique Nameprot_E-siliculosus-1a_M_contig88.16818.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length210
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16818.1 vs. uniprot
Match: A0A6H5J7N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7N1_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 1.370e-27
Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 0 
Query:  119 LGLLSGEAVAEAXXXXXXXXXXXXXXTEEAQIGAGEAVGSVSGSRGISSLDNAPEEQQQPQQRPDSPFSATVSRAVSSSYPAVGAPVARSS 209
            LGLLSGEAVAEA XXXXXXXXXXXXX EEAQ+GAGEAVGSVSGSRGISSLDN PEE+QQPQQ+PDSPFSATVSRAVSSSYPAVGAPVARSS
Sbjct:   61 LGLLSGEAVAEAAXXXXXXXXXXXXX-EEAQVGAGEAVGSVSGSRGISSLDNTPEERQQPQQQPDSPFSATVSRAVSSSYPAVGAPVARSS 150
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig88.16818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J7N1_9PHAE1.370e-2793.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig88contigE-siliculosus-1a_M_contig88:316413..317042 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig88.16818.1mRNA_E-siliculosus-1a_M_contig88.16818.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig88 314322..317042 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig88.16818.1 ID=prot_E-siliculosus-1a_M_contig88.16818.1|Name=mRNA_E-siliculosus-1a_M_contig88.16818.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=210bp
MAAARVSVRPAALATTTVDEGVGGGVLFGDGRASATAAAVAQAATDAAMM
PPPLSPPSPSRQQQQLQQLQGEGRREGSRSAPLVVIDLEDEEEEEEEDEE
EEEEEEEDASNNDDDDDDLGLLSGEAVAEAAELAAAAAAATPATTEEAQI
GAGEAVGSVSGSRGISSLDNAPEEQQQPQQRPDSPFSATVSRAVSSSYPA
VGAPVARSSS
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