prot_E-siliculosus-1a_M_contig88.16808.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig88.16808.1
Unique Nameprot_E-siliculosus-1a_M_contig88.16808.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length193
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16808.1 vs. uniprot
Match: D7G268_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G268_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 5.610e-75
Identity = 114/132 (86.36%), Postives = 121/132 (91.67%), Query Frame = 0 
Query:   54 DAAASVRPGSFHGFTSKPDKVLNAVFRDRKVLSNTLQVNMLQTDGIVANARAFKALCLALLRPQEGIKALIPMCAGCGKTIRAVRYHCHKCAKDWCRKCTDPEKRRVTIITRCQKSRSHIECQSCGHSKELT 185
            DA ASVRPGSF GFTS+PD V N VFRDRKVLS+T+QVNMLQTD IVANARAFKALCLALLRPQEGIK LIPMCAGCGKTIRAVR HCH CAK+WCRKCTDPE+RRVTI TRCQKSRSHIECQ+CG+SK LT
Sbjct:   54 DAEASVRPGSFLGFTSEPDHVSNTVFRDRKVLSDTMQVNMLQTDSIVANARAFKALCLALLRPQEGIKVLIPMCAGCGKTIRAVRCHCHTCAKNWCRKCTDPEERRVTI-TRCQKSRSHIECQNCGYSKGLT 184
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig88.16808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G268_ECTSI5.610e-7586.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig88contigE-siliculosus-1a_M_contig88:227453..228836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig88.16808.1mRNA_E-siliculosus-1a_M_contig88.16808.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig88 227453..228836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig88.16808.1 ID=prot_E-siliculosus-1a_M_contig88.16808.1|Name=mRNA_E-siliculosus-1a_M_contig88.16808.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=193bp
MAAAGAAARSPPPSAPGGHAGGVAACSTTRQPPSVAVAEDTPPSPPGDDH
AGGDAAASVRPGSFHGFTSKPDKVLNAVFRDRKVLSNTLQVNMLQTDGIV
ANARAFKALCLALLRPQEGIKALIPMCAGCGKTIRAVRYHCHKCAKDWCR
KCTDPEKRRVTIITRCQKSRSHIECQSCGHSKELTPYEVLLC*
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