prot_E-siliculosus-1a_M_contig877.16785.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig877.16785.1
Unique Nameprot_E-siliculosus-1a_M_contig877.16785.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length182
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig877.16785.1 vs. uniprot
Match: D7G7T2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T2_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 1.270e-108
Identity = 164/182 (90.11%), Postives = 168/182 (92.31%), Query Frame = 0 
Query:    1 MLIIGQRADALAGPWHAALLLLLLSGLRQLGFCSALLRVAPPHRSNFKMFKARYPLEGGPPQVKLHVAIIVEDSRSTGEKGDRPNSEDGDTGRRLVLFDFLPKEPTAFETTLRLLTGNDVPGNLRERGAS-IPAFRVGVRGESDATIGDMRGFVAKYPDRLSLVSNNCFSFVDAFVARHRLE 181
            M+I+GQRA ALAGPWHAALLLLLLS LRQLGFCSALL VAPPHRSNFKMFKARYPLEGGPPQVKLH+AIIVEDSRSTGEKG RPNSED DTGRRLVLFDFLPKEPTAFETTLRLLTGNDVPGNLRER    +P   V V GESDATIGDMRGFVAKYPDRLSLVSNNCFSFVDAFVARHRLE
Sbjct:    1 MVILGQRAAALAGPWHAALLLLLLSSLRQLGFCSALLGVAPPHRSNFKMFKARYPLEGGPPQVKLHIAIIVEDSRSTGEKGGRPNSEDRDTGRRLVLFDFLPKEPTAFETTLRLLTGNDVPGNLRERELRFLPPGSVYV-GESDATIGDMRGFVAKYPDRLSLVSNNCFSFVDAFVARHRLE 181
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig877.16785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7T2_ECTSI1.270e-10890.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..181
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 28..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig877contigE-siliculosus-1a_M_contig877:2586..3131 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig877.16785.1mRNA_E-siliculosus-1a_M_contig877.16785.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig877 2586..3131 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig877.16785.1 ID=prot_E-siliculosus-1a_M_contig877.16785.1|Name=mRNA_E-siliculosus-1a_M_contig877.16785.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=182bp
MLIIGQRADALAGPWHAALLLLLLSGLRQLGFCSALLRVAPPHRSNFKMF
KARYPLEGGPPQVKLHVAIIVEDSRSTGEKGDRPNSEDGDTGRRLVLFDF
LPKEPTAFETTLRLLTGNDVPGNLRERGASIPAFRVGVRGESDATIGDMR
GFVAKYPDRLSLVSNNCFSFVDAFVARHRLE*
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