prot_E-siliculosus-1a_M_contig87.16776.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig87.16776.1
Unique Nameprot_E-siliculosus-1a_M_contig87.16776.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length175
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16776.1 vs. uniprot
Match: D7FW09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW09_ECTSI)

HSP 1 Score: 290 bits (742), Expect = 1.420e-88
Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0 
Query:   17 ASYIFRQITAHLAYYLGLYDEAEASIERALELGHEEDGSMQLRLARMHVRREKADSTNAERHLRSALASYSEAMKFVRVASEAIHYLEVTSVYLKLNETQRAANALSTVLVRWPALLVDAENDGHGSVPVIEGDRAEVDLPVASNVLGGESIFLQ 171
            A +IFRQITAHLAYYLGLYDEAEASIERALELGHEEDGSMQLRLARMHVRREKADS NAERHLRSALASYSEAMKFVRVASEA+HYLEVTSVYLKLNETQRAANALSTVLVRWPALLVDAENDGHGSVPVIEGDRAEVDLPVASNVLGGESIFLQ
Sbjct:   16 ACFIFRQITAHLAYYLGLYDEAEASIERALELGHEEDGSMQLRLARMHVRREKADSANAERHLRSALASYSEAMKFVRVASEAVHYLEVTSVYLKLNETQRAANALSTVLVRWPALLVDAENDGHGSVPVIEGDRAEVDLPVASNVLGGESIFLQ 170
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16776.1 vs. uniprot
Match: A0A6H5JP04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP04_9PHAE)

HSP 1 Score: 288 bits (737), Expect = 1.180e-87
Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 0 
Query:   20 IFRQITAHLAYYLGLYDEAEASIERALELGHEEDGSMQLRLARMHVRREKADSTNAERHLRSALASYSEAMKFVRVASEAIHYLEVTSVYLKLNETQRAANALSTVLVRWPALLVDAENDGHGSVPVIEGDRAEVDLPVASNVLGGESIFLQARLT 175
            IFRQITAHLAYYLGLYDEAEASIERALELGHEEDGSMQLRLARMHVRREKADS +AERHLRSALASYSEAMKFVRVASEAIHYLEVTSVYLKLNETQRAANALSTVL+RWPALLVD ENDGHGSVPVIEGDRAEVDLPVAS VLGGESIFLQARLT
Sbjct:   19 IFRQITAHLAYYLGLYDEAEASIERALELGHEEDGSMQLRLARMHVRREKADSASAERHLRSALASYSEAMKFVRVASEAIHYLEVTSVYLKLNETQRAANALSTVLLRWPALLVDTENDGHGSVPVIEGDRAEVDLPVASYVLGGESIFLQARLT 174
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig87.16776.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW09_ECTSI1.420e-8897.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP04_9PHAE1.180e-8796.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 12..131
e-value: 2.0E-7
score: 32.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 25..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig87contigE-siliculosus-1a_M_contig87:639332..641132 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig87.16776.1mRNA_E-siliculosus-1a_M_contig87.16776.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig87 639330..641132 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig87.16776.1 ID=prot_E-siliculosus-1a_M_contig87.16776.1|Name=mRNA_E-siliculosus-1a_M_contig87.16776.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=175bp
VDFPYSRTLRSLYMWHASYIFRQITAHLAYYLGLYDEAEASIERALELGH
EEDGSMQLRLARMHVRREKADSTNAERHLRSALASYSEAMKFVRVASEAI
HYLEVTSVYLKLNETQRAANALSTVLVRWPALLVDAENDGHGSVPVIEGD
RAEVDLPVASNVLGGESIFLQARLT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf