prot_E-siliculosus-1a_M_contig87.16760.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig87.16760.1
Unique Nameprot_E-siliculosus-1a_M_contig87.16760.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length553
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16760.1 vs. uniprot
Match: D7FW22_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW22_ECTSI)

HSP 1 Score: 824 bits (2129), Expect = 2.580e-298
Identity = 451/476 (94.75%), Postives = 461/476 (96.85%), Query Frame = 0 
Query:   77 MNETGSGTVTLWEFREYFDLPDDRSTTRLFRCFDEDRDNRIGFLELVVGMWTYCCNCNASVVCLCFDLLDMDHNGKIGADEFDFMIVDVFGPEWEENDEAKAVHTWFHERDDALLGFPEMGMDAWSAFVSANLQIQAPAVHTRLVLQKKVLGVGFWTHCLRKNMTIFLGRTATVDQILSAHVSPNVLEELAQDRRLELDHDDSTQFNLRVIRRTGPFPRRRKYRDMGGKRLRAKAAAVVGAVAADNVKKFATLTVREVFERVTVPAGQDATWEEPKPPSTLQALMASLTAIVERAPPGGAXXXXXXXXXXXXXXXXXXXXXXSKKRNKNKKGAPPDALALLKNRPGIDGAPLGSPAAAPSSPTGSAVDADPAIANAFYGLKPLPEAVAPVSPSAAAGSGRDRAKTAARTAKKGGSPAASSPGGSRAVGGGRTTLSRTGKELVGAGEVGCVGVPGGEGGTGALSTRLLGGANGGRSG 552
            MNETG+GTVTLWEFREYF+LPDDRSTTRLFRCFDEDRDNRIGFLELVVGMWTYCCNCNASVVCLCFDLLDMDHNGKIGADEF+FMIVDVFGPEWE+NDEAKAVHTWFHERDDALLGFPEM MDAWSAFVSAN QIQAPAVHTRLVLQKKVLGVGFWTHCL KNMTIFLGRTATV+QILSAHVSPN+LEELAQDRRLELDHDDSTQFNLRVIRRTGPFPRRRKYRDM GK+LRAKAAA VGAVAADNVKKFATLTVRE FERVTVPAG+DATWE+PKPPSTLQALMASLTAIVERAPPGGAXXXXXXXXXXXXXXXXXXXXXXSKKR  NKKGAPPDALALLKNRPGIDGAPLGSPA APSSPTGSAVDADPAIANAFYGLKPLPEAVAPVSPSAAAGSGRDRAKTAARTAKKG SPAASSP GSRAVGGG+ TLSRTGKELVGAGEVGCVGVPGGEGGTG LS RLLGGANG RSG
Sbjct:    1 MNETGNGTVTLWEFREYFNLPDDRSTTRLFRCFDEDRDNRIGFLELVVGMWTYCCNCNASVVCLCFDLLDMDHNGKIGADEFNFMIVDVFGPEWEKNDEAKAVHTWFHERDDALLGFPEMDMDAWSAFVSANPQIQAPAVHTRLVLQKKVLGVGFWTHCLPKNMTIFLGRTATVEQILSAHVSPNILEELAQDRRLELDHDDSTQFNLRVIRRTGPFPRRRKYRDMAGKKLRAKAAAAVGAVAADNVKKFATLTVREAFERVTVPAGKDATWEDPKPPSTLQALMASLTAIVERAPPGGAXXXXXXXXXXXXXXXXXXXXXXSKKRKNNKKGAPPDALALLKNRPGIDGAPLGSPAVAPSSPTGSAVDADPAIANAFYGLKPLPEAVAPVSPSAAAGSGRDRAKTAARTAKKGVSPAASSPEGSRAVGGGKITLSRTGKELVGAGEVGCVGVPGGEGGTGTLSARLLGGANGVRSG 476
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig87.16760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FW22_ECTSI2.580e-29894.75EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 50..195
e-value: 2.4E-19
score: 71.4
IPR028846Recoverin familyPANTHERPTHR23055CALCIUM BINDING PROTEINScoord: 62..162
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 110..122
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 146..158
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 97..132
score: 7.763
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 141..168
score: 9.074
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 50..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig87contigE-siliculosus-1a_M_contig87:519767..523394 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig87.16760.1mRNA_E-siliculosus-1a_M_contig87.16760.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig87 519767..523394 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig87.16760.1 ID=prot_E-siliculosus-1a_M_contig87.16760.1|Name=mRNA_E-siliculosus-1a_M_contig87.16760.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=553bp
MGAAASLVTEDQRASLHIAVLQVLPSVVYALEERRFKAGSFYETPEFAQQ
KELCPLFAALGLHEWSISHLWRHFRQMNETGSGTVTLWEFREYFDLPDDR
STTRLFRCFDEDRDNRIGFLELVVGMWTYCCNCNASVVCLCFDLLDMDHN
GKIGADEFDFMIVDVFGPEWEENDEAKAVHTWFHERDDALLGFPEMGMDA
WSAFVSANLQIQAPAVHTRLVLQKKVLGVGFWTHCLRKNMTIFLGRTATV
DQILSAHVSPNVLEELAQDRRLELDHDDSTQFNLRVIRRTGPFPRRRKYR
DMGGKRLRAKAAAVVGAVAADNVKKFATLTVREVFERVTVPAGQDATWEE
PKPPSTLQALMASLTAIVERAPPGGAPAAGSSASPSLSRSPASRSPTSSK
KRNKNKKGAPPDALALLKNRPGIDGAPLGSPAAAPSSPTGSAVDADPAIA
NAFYGLKPLPEAVAPVSPSAAAGSGRDRAKTAARTAKKGGSPAASSPGGS
RAVGGGRTTLSRTGKELVGAGEVGCVGVPGGEGGTGALSTRLLGGANGGR
SG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR028846Recoverin