prot_E-siliculosus-1a_M_contig87.16754.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig87.16754.1
Unique Nameprot_E-siliculosus-1a_M_contig87.16754.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length40
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig87.16754.1 vs. uniprot
Match: D7FW28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW28_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 2.680e-22
Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 0 
Query:    1 MQGSSWTRWTYPFDHENSKKCRKYWTAVRPRISKHRWWA 39
            MQGSSWTRWTYPFDHENSKKCRKYWTAV PRISKHR WA
Sbjct:    1 MQGSSWTRWTYPFDHENSKKCRKYWTAVPPRISKHRSWA 39
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig87.16754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FW28_ECTSI2.680e-2294.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig87contigE-siliculosus-1a_M_contig87:483247..483583 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig87.16754.1mRNA_E-siliculosus-1a_M_contig87.16754.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig87 482245..486499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig87.16754.1 ID=prot_E-siliculosus-1a_M_contig87.16754.1|Name=mRNA_E-siliculosus-1a_M_contig87.16754.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=40bp
MQGSSWTRWTYPFDHENSKKCRKYWTAVRPRISKHRWWA*
back to top