prot_E-siliculosus-1a_M_contig87.16719.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig87.16719.1
Unique Nameprot_E-siliculosus-1a_M_contig87.16719.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length923
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig87.16719.1 vs. uniprot
Match: A0A6H5JKM2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKM2_9PHAE)

HSP 1 Score: 1143 bits (2956), Expect = 0.000e+0
Identity = 686/878 (78.13%), Postives = 714/878 (81.32%), Query Frame = 0
Query:  172 IYVANRARIDSKAVKAVVDYASKQAAAGTDKLLLAASGAASPALLLMGVN-TTETQAALNNSVQLLSMGIVPDSISLSPKLLTSLKDFDDDDKRLDAAYQR---------------------------------------------------------------QRRRRSKPLPARLLGSLPSTINKASDLAYEVEQEV--------------------------------------------KYERAGSRANKLLKPIGLSLPEAKRNGLLLGRTPSGSAGKLLEASDASLTANSSPSRILGSRRLEKTPAVVEPLVQEVSARREAMPPAPDPVGVFDRFERKGVDAQGGEISSTEHSLAEVLASQPDVFTKQLSKCIDSIGDEVQVQERGVRAANAVLCSTEPVIAGLEEALEREAVLLEELKNVTRNVQQMYVLAEXXXXXXXXXXXXXXXXXXXXXXXELAVYLEAYIGGETAR-------------------IERLETIKSRVLEIRGLGGIQDSSRAAQVELSSRTIGFLQSFDAEVVAGHGEAKAVGGRLDVVWRESAERARDEAGHAHEYALVAACRLWKAAAVEGTGKRANTLDSVRLELTRTQEIQDSTTSTMGVPSKVGREEFARATGAEVRAGEGDRERLRAVKDEAARDTEGGDQQASVAPVERGVTAAPAPSFPVRPQADHDIKLTPPMTASPDITPLAGESTTVQTTEAEMLVDLDQSVKSAEVVDAVVVDEAPVRGDSAATPLDENTSRRSGDGALSRKGSLSAERTTMASEESNIELVVDESSSFVDVEVEMQDDVSDPARVGLKFLDVFALLIEKVIFVGIPTLVSGGSLVWQRVDNAVNGAKGRKGWKLLDRLKKDSAG 922
            IYVANR RIDSKAVKAVVDYASKQAAAGT KLLLAASGA SPALLLMGVN TTETQAALNNSVQLLSMGIVPDSISLSPKLL SLKDFDDDDKRLDAAYQR                                                               QRRRRSKPLPARLLGSLPSTINKASDLAYEVEQEV                                            KYERAGSRANKLL+PIGLSLPEAKRNGLLLGRTPSGSAGK+LEASDASL AN SPSRILGSRRLE TPAVVEP +QEVSARRE MPP PD VGVFDRF RKGVDA+GGE+SSTE +LAE+LASQPDVFTKQLSKCIDSIGDEVQ+QERG+RAANAVLCSTEPVIAGLEEALEREAVLLEELKNVTRNVQQ YVLAE XXXXXXXXXXXXXXXXXXXX  ELAVYLEAYIGGETAR                   IERLETIKSR+L+ RGLGGIQDSSRAAQVELSSRTIG LQ FD EVVAGH EAKAVGGRLDV+WRESAERARDEAG AHEYALVAACRLWKAAAVEG+GKRA+TLDSVRLELTR Q+IQDSTTSTMGVP KVGREEFARATGAEVRA EGDRERLRAVKDEAARDTEGGDQQASV+PVERGVTAAPAPSFP R QADH +KLTPPMT +PDITP+AGESTTVQT EAEM+VDLDQSVKSAEVVDAVVVDEA VRG SAAT LDEN+SRRSGDG LSRKG LSAERTT+ASEES+IELVVD+SSSFVDVE EM+DDVSDPARVGLKFLDVFALLIEKV+FVG+PTLVSGGSLVWQR+DNAVNGAKGRKGWKLLDRLKKDSAG
Sbjct:    7 IYVANRPRIDSKAVKAVVDYASKQAAAGTGKLLLAASGAGSPALLLMGVNNTTETQAALNNSVQLLSMGIVPDSISLSPKLLASLKDFDDDDKRLDAAYQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGQTGNRAARRRQSSFRLQLQRRRRSKPLPARLLGSLPSTINKASDLAYEVEQEVRPLRSLSRRFSARTKAKLESGLKPPTHSLLHEQHYVRLFAAVQVKYERAGSRANKLLRPIGLSLPEAKRNGLLLGRTPSGSAGKILEASDASLAANPSPSRILGSRRLETTPAVVEPPIQEVSARREVMPPLPDLVGVFDRFGRKGVDARGGELSSTERALAEMLASQPDVFTKQLSKCIDSIGDEVQMQERGLRAANAVLCSTEPVIAGLEEALEREAVLLEELKNVTRNVQQTYVLAEMXXXXXXXXXXXXXXXXXXXXVVELAVYLEAYIGGETARHGEYSSRLNLKSRSSVTNLIERLETIKSRMLQTRGLGGIQDSSRAAQVELSSRTIGLLQYFDGEVVAGHEEAKAVGGRLDVIWRESAERARDEAGRAHEYALVAACRLWKAAAVEGSGKRASTLDSVRLELTRIQDIQDSTTSTMGVPRKVGREEFARATGAEVRAREGDRERLRAVKDEAARDTEGGDQQASVSPVERGVTAAPAPSFPGRSQADHGVKLTPPMTTTPDITPVAGESTTVQTPEAEMVVDLDQSVKSAEVVDAVVVDEASVRGGSAATSLDENSSRRSGDGGLSRKGFLSAERTTIASEESSIELVVDKSSSFVDVEAEMEDDVSDPARVGLKFLDVFALLIEKVLFVGLPTLVSGGSLVWQRLDNAVNGAKGRKGWKLLDRLKKDSAG 884          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16719.1 vs. uniprot
Match: A0A835Z0K6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0K6_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.040e-19
Identity = 96/300 (32.00%), Postives = 145/300 (48.33%), Query Frame = 0
Query:   70 QLSDLDARVIDELLRDPAFLDSILEQEVRLGGEGADEGGGGMAANSTVSVGNSSSRALAKAGEIPSSYSSDYDSVTMQVVEELQLSVKGILAKVSAAFESAGIYVANRARIDSKAVKAVVDYASKQAAAGTDKLLLAASGAASPALLLMGV-NTTETQAA------------LNNSVQLLSMGIVP----DSISLSPKLLTSLKDFDDDDKRLDAAYQRQRRRRSKPLP------------------ARLLGSLPSTINKASDLAYEVEQEVKYERAGSRANKLLKPIGLSLPEAKRNGL 334
            +LSD+DA V+ EL++D  F+ S+  +E      G  +   G+      + G     A A AGE        Y S T Q+ E L L     +AKV AA E+A I + N+ ++D   V  V +   ++A     + L AA+ AA P +LL    N T                 L     LL +G+ P    ++   +P+LL + K F+D+D RL AAY R +R+R+  LP                   +LLG+LP+ +  A DLAY VEQEV+YE+ G R  ++L+ +G+ L  A ++ L
Sbjct:  209 RLSDIDAAVLRELMQDQEFMSSVAMKE------GLKQQLDGLQDEYAAAAGGKG--AGAAAGE--------YSSATFQIFEGLSLGWGTFVAKVGAAVETAAIAIQNKVQVDINTVLGVTNAIVQRATYDARRTLAAAATAARPDMLLAPARNVTRXXXXXXXXXXXXPALDLGLGFTLLQLGVNPFEEVNAGGAAPELLDAFKGFEDEDARLRAAYARGKRKRNASLPEASSAAPRFSVSRQTAEACKLLGALPAAVGAADDLAYAVEQEVRYEKPGRRTTQVLRRVGIPLSGAAQSAL 492          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig87.16719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKM2_9PHAE0.000e+078.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z0K6_9STRA1.040e-1932.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 470..493
NoneNo IPR availableCOILSCoilCoilcoord: 500..523
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..922
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.617

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig87contigE-siliculosus-1a_M_contig87:130051..137274 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig87.16719.1mRNA_E-siliculosus-1a_M_contig87.16719.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig87 129931..137874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig87.16719.1 ID=prot_E-siliculosus-1a_M_contig87.16719.1|Name=mRNA_E-siliculosus-1a_M_contig87.16719.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=923bp
MRKGKLIVLVGLASLDWAGGFLHVVQVPSSRGNSARVGIPPRCVDACRAA
GRRQSTPLFAATEEADATRQLSDLDARVIDELLRDPAFLDSILEQEVRLG
GEGADEGGGGMAANSTVSVGNSSSRALAKAGEIPSSYSSDYDSVTMQVVE
ELQLSVKGILAKVSAAFESAGIYVANRARIDSKAVKAVVDYASKQAAAGT
DKLLLAASGAASPALLLMGVNTTETQAALNNSVQLLSMGIVPDSISLSPK
LLTSLKDFDDDDKRLDAAYQRQRRRRSKPLPARLLGSLPSTINKASDLAY
EVEQEVKYERAGSRANKLLKPIGLSLPEAKRNGLLLGRTPSGSAGKLLEA
SDASLTANSSPSRILGSRRLEKTPAVVEPLVQEVSARREAMPPAPDPVGV
FDRFERKGVDAQGGEISSTEHSLAEVLASQPDVFTKQLSKCIDSIGDEVQ
VQERGVRAANAVLCSTEPVIAGLEEALEREAVLLEELKNVTRNVQQMYVL
AEMSEAVEAAEAYLRRLEDLSANVVELAVYLEAYIGGETARIERLETIKS
RVLEIRGLGGIQDSSRAAQVELSSRTIGFLQSFDAEVVAGHGEAKAVGGR
LDVVWRESAERARDEAGHAHEYALVAACRLWKAAAVEGTGKRANTLDSVR
LELTRTQEIQDSTTSTMGVPSKVGREEFARATGAEVRAGEGDRERLRAVK
DEAARDTEGGDQQASVAPVERGVTAAPAPSFPVRPQADHDIKLTPPMTAS
PDITPLAGESTTVQTTEAEMLVDLDQSVKSAEVVDAVVVDEAPVRGDSAA
TPLDENTSRRSGDGALSRKGSLSAERTTMASEESNIELVVDESSSFVDVE
VEMQDDVSDPARVGLKFLDVFALLIEKVIFVGIPTLVSGGSLVWQRVDNA
VNGAKGRKGWKLLDRLKKDSAG*
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