prot_E-siliculosus-1a_M_contig86.16693.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig86.16693.1
Unique Nameprot_E-siliculosus-1a_M_contig86.16693.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length294
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig86.16693.1 vs. uniprot
Match: D8LLF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLF5_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 6.240e-93
Identity = 182/192 (94.79%), Postives = 185/192 (96.35%), Query Frame = 0 
Query:  108 RTDPYGRLCWQHRKTGQVTYGTSYALHQQGYNTGLAAKGFDSDXXXXXXXXXXXXXXXXXXXPVPALAPVAVVPPPQPYMQQPQYGISPVPQQYYGHSPVPYGVSPVAMYPAAPWNAMPASPVPVQVPEYIKRQ------AKXXXXXXXXXXXXXXXXXIAAGVWEKLYTRDGGKFWQHSVTGETSKTDPYY 293
            RTDPYGRLCWQHR+TGQVTYGTSYALHQQGYNTGLAAKGFDSDXXXXXXXXXXXXXXXXXX PVPALAPVAVVPPPQPYMQQPQYGISPVP+QYYGHSPVPYG+SPVAMYPAAPWNAMPASPVPVQVPEYIKRQ      AKXXXXXXXXXXXXXXXXXIAAGVWEKLYTRDGGKFWQHSVTGETSKTDPYY
Sbjct:   51 RTDPYGRLCWQHRQTGQVTYGTSYALHQQGYNTGLAAKGFDSDXXXXXXXXXXXXXXXXXX-PVPALAPVAVVPPPQPYMQQPQYGISPVPRQYYGHSPVPYGMSPVAMYPAAPWNAMPASPVPVQVPEYIKRQHAEALKAKXXXXXXXXXXXXXXXXXIAAGVWEKLYTRDGGKFWQHSVTGETSKTDPYY 241
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BLAST of mRNA_E-siliculosus-1a_M_contig86.16693.1 vs. uniprot
Match: A0A6H5KIW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIW0_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 1.380e-62
Identity = 146/157 (92.99%), Postives = 148/157 (94.27%), Query Frame = 0 
Query:  143 AAKGFDSDXXXXXXXXXXXXXXXXXXXPVPALAPVAVVPPPQPYMQQPQYGISPVPQQYYGHSPVPYGVSPVAMYPAAPWNAMPASPVPVQVPEYIKRQ------AKXXXXXXXXXXXXXXXXXIAAGVWEKLYTRDGGKFWQHSVTGETSKTDPYY 293
            AAKGFDSDXXXXXXXXXXXXXXXXXX PVPALAPVA+VPPPQPYMQQPQYGISPVPQQYYGHSPVPYGVSPVAMYPAAPW+AMPASPVPVQVPEYIKRQ      AKXXXXXXXXXXXXXXXXXIAAG WEKLYTRDGGKFWQHSVTGE SKTDPYY
Sbjct:   27 AAKGFDSDXXXXXXXXXXXXXXXXXX-PVPALAPVALVPPPQPYMQQPQYGISPVPQQYYGHSPVPYGVSPVAMYPAAPWSAMPASPVPVQVPEYIKRQHAEALKAKXXXXXXXXXXXXXXXXXIAAGAWEKLYTRDGGKFWQHSVTGEISKTDPYY 182
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig86.16693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLF5_ECTSI6.240e-9394.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIW0_9PHAE1.380e-6292.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 238..259
NoneNo IPR availableCOILSCoilCoilcoord: 84..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig86contigE-siliculosus-1a_M_contig86:631312..635244 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig86.16693.1mRNA_E-siliculosus-1a_M_contig86.16693.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig86 631312..635244 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig86.16693.1 ID=prot_E-siliculosus-1a_M_contig86.16693.1|Name=mRNA_E-siliculosus-1a_M_contig86.16693.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=294bp
MSKFIKRRNRPSFEPKADKKGGSAAGLFFQLQAFHQQTDNSSSRQVDFDF
FVRTKRDYVVVCTRLCMYNLAPRPTLVPRGTETKKEETKKAEESSEDEEE
TEQQWEQRTDPYGRLCWQHRKTGQVTYGTSYALHQQGYNTGLAAKGFDSD
DDDDDDKKPAAAAAAAAAAPVPALAPVAVVPPPQPYMQQPQYGISPVPQQ
YYGHSPVPYGVSPVAMYPAAPWNAMPASPVPVQVPEYIKRQAKKKKEEEE
KKKKAAEKKKIAAGVWEKLYTRDGGKFWQHSVTGETSKTDPYY*
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