prot_E-siliculosus-1a_M_contig86.16652.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig86.16652.1
Unique Nameprot_E-siliculosus-1a_M_contig86.16652.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length519
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig86.16652.1 vs. uniprot
Match: A0A6H5L3P5_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3P5_9PHAE)

HSP 1 Score: 565 bits (1455), Expect = 7.090e-196
Identity = 427/519 (82.27%), Postives = 431/519 (83.04%), Query Frame = 0
Query:    1 MSEQALRKRLETLVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRNPQPARQRKPEESTGSRSSRKDSGXXXXXXXXXXXXXXXXXXXXXXXXXXTXTAPSXXXXXXXXXXXTRAVPRLQKAGTGAVKAASAAAA-PVALPAPAVDLLDFSEPAPPQAPXXXXXXXXXXXXXXXXXXXDQMFEFSDFQSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQPAAQSAXXXXXXXXXAGAPGKASAASILSMFNSPAGGGVAGRSMAGPVGSSPVAGVMKTPELNQVSQMMSTLNVGGLAPMGSQQMGMPGAGGWAQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQNTQGGLNAGASGGAMFGVGQAGGHQQHPQGMGAATNGSGLTGLRGGGDGAAQGNGATVVMPGGLGAGASGMGMGELR 518
            M+EQALRKRLE LVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQV+GMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSR+PQPARQRKPEESTGSRSSR DSG        XXXXXXXXXXXXXXXXXX X AP XXXXXXXXX  TRAVPRLQKAGTGAVKAASAAAA P A+PAPAVDLLDFSEP PPQAPXXXXXXXXXXXXXXXXXX DQMFEFSDFQSAP                             VQQP  QS XXXXXXXX AGAPGKASAASILSMFNSPAGGG  GRSMAGPVGSSPV GVMKTPELNQVSQMMSTLNVGGLAPMGSQQMGMPGAGGW QQ XXXXXXXXXXXXX             XXXXXXXXXXXXXX  QQ   GG  AGASGGA  GVGQAGG QQHPQGM AA NGSGLTGLRGGGDGA QGN ATVVMP  L AGASGMGMG LR
Sbjct:    1 MTEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVQGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRSPQPARQRKPEESTGSRSSRMDSGAASSKSPTXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXTTTRAVPRLQKAGTGAVKAASAAAAAPSAVPAPAVDLLDFSEPVPPQAPXXXXXXXXXXXXXXXXXXMDQMFEFSDFQSAPSSSPGATVPAAAALVGSQQQQQPAT----VQQPXXQS-XXXXXXXXAAGAPGKASAASILSMFNSPAGGGAVGRSMAGPVGSSPVTGVMKTPELNQVSQMMSTLNVGGLAPMGSQQMGMPGAGGWTQQQXXXXXXXXXXXXXWAQQQKLQQLLQQXXXXXXXXXXXXXXL-QQKIHGG--AGASGGAKSGVGQAGGDQQHPQGMDAAPNGSGLTGLRGGGDGATQGNXATVVMPXXLXAGASGMGMGGLR 511          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16652.1 vs. uniprot
Match: D8LBT0_ECTSI (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT0_ECTSI)

HSP 1 Score: 476 bits (1224), Expect = 1.060e-162
Identity = 345/393 (87.79%), Postives = 346/393 (88.04%), Query Frame = 0
Query:    1 MSEQALRKRLETLVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRNPQPARQRKPEESTGSRSSRKDSGXXXXXXXXXXXXXXXXXXXXXXXXXXTXTAPSXXXXXXXXXXXTRAVPRLQKAGTGAVKAASAAAAPVALP-----APAVDLLDFSEPAPPQAPXXXXXXXXXXXXXXXXXXXDQMFEFSDFQSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQPAAQSAXXXXXXXXXAGAPGKASAASILSMFNSPAGGGVAGRSMAGPVGSSPVAGVMKTPELNQVSQMMSTLNVGGLAPMGSQQMGMP 388
            MSEQALRKRLE LVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRNPQPARQRKPEESTGSRSSRKDSG XXXXXXXXXXXXXXXXXXXXXXXXX X AP XXXXXXXXXX TRAVPRLQKAGTGAVKAAS              APAVDLLDFSEPAPPQAPXXXXXXXXXXXXXXXXXX DQMFEFSDFQSAP         XXXXX               VQQPA+QS XXXXXXXXX GAPGKASAASILSMFNSPAGGGVAGRSMAGPVGSSPVAGVMKTPELNQVSQMMSTLNVGGLAPMGSQQMGMP
Sbjct:    1 MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRNPQPARQRKPEESTGSRSSRKDSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXTTRAVPRLQKAGTGAVKAASTXXXXXXXXXXXXXAPAVDLLDFSEPAPPQAPXXXXXXXXXXXXXXXXXXADQMFEFSDFQSAPSSSSGATVPXXXXXVGSQQQPAA------VQQPASQSGXXXXXXXXXXGAPGKASAASILSMFNSPAGGGVAGRSMAGPVGSSPVAGVMKTPELNQVSQMMSTLNVGGLAPMGSQQMGMP 387          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16652.1 vs. uniprot
Match: A0A836C8F7_9STRA (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F7_9STRA)

HSP 1 Score: 180 bits (457), Expect = 2.220e-51
Identity = 86/119 (72.27%), Postives = 98/119 (82.35%), Query Frame = 0
Query:    7 RKRLETLVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRNP 125
            +KRLE LVK  +NRFCADCG REPRWASVNLGLFICL CSGIHRNLGVHISFVRSVNLDTWK  QV  ME +GN RAKA++EA VP    VP E ++VRE +KWIR KYEH+R+++R P
Sbjct:    7 KKRLEALVKREDNRFCADCGCREPRWASVNLGLFICLGCSGIHRNLGVHISFVRSVNLDTWKTEQVDKMERIGNARAKAYYEANVPPGTPVPTESSSVRELDKWIRSKYEHKRYIARGP 125          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16652.1 vs. uniprot
Match: A0A7S3UXM8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXM8_HETAK)

HSP 1 Score: 177 bits (449), Expect = 8.120e-50
Identity = 82/128 (64.06%), Postives = 101/128 (78.91%), Query Frame = 0
Query:    2 SEQALRKRLETLVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRNPQPAR 129
            SE+  ++RL  L K  EN+FC DCG REPRWAS  LG+F+C+ CSGIHRNLGVHISFVRSVNLD+W+   V+ ME  GN RA+A+FEAEVP++Y +P E +T RE EKWIRDKYEHRRF++R P P +
Sbjct:   15 SEEDHKRRLTALTKKDENKFCIDCGAREPRWASATLGVFMCIRCSGIHRNLGVHISFVRSVNLDSWREDHVQRMERWGNGRARAYFEAEVPSNYPIPGERSTTREVEKWIRDKYEHRRFLAREPPPGK 142          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16652.1 vs. uniprot
Match: A0A7S2UT74_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT74_9STRA)

HSP 1 Score: 175 bits (443), Expect = 9.640e-46
Identity = 81/124 (65.32%), Postives = 99/124 (79.84%), Query Frame = 0
Query:    2 SEQALRKRLETLVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRNP 125
            S Q  + RLE +VK+G+N+FCADCG REPRWAS  LG+FIC+ CSGIHRNLGVHISFVRSVNLDTWK   V+ ME  GN RA  +FEA+VP +Y +P E ++ RE E+WIRDKYE+R+F +RNP
Sbjct:   15 SHQDHKVRLEAMVKSGDNKFCADCGAREPRWASATLGVFICIRCSGIHRNLGVHISFVRSVNLDTWKEDHVRKMEAWGNARAAEYFEADVPPNYRIPDEKSSTRELERWIRDKYEYRKFAARNP 138          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16652.1 vs. uniprot
Match: G5A4X3_PHYSP (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A4X3_PHYSP)

HSP 1 Score: 166 bits (419), Expect = 2.170e-45
Identity = 75/120 (62.50%), Postives = 96/120 (80.00%), Query Frame = 0
Query:    6 LRKRLETLVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRNP 125
            L+K+L  L+K  EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W   QV+ M+  GN RAKA++EA VP  Y +P EH++VRE+E WIR+KYE +RFV   P
Sbjct:   16 LKKQLNELMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTSEQVQQMQRWGNARAKAYYEANVPRDYRIPTEHSSVREKEMWIREKYERKRFVGEAP 135          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16652.1 vs. uniprot
Match: A0A3F2RQV0_9STRA (Arf-GAP domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQV0_9STRA)

HSP 1 Score: 171 bits (432), Expect = 8.300e-45
Identity = 77/120 (64.17%), Postives = 98/120 (81.67%), Query Frame = 0
Query:    6 LRKRLETLVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRNP 125
            L+K+L  L+K  EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W P QV+ M+  GN RAKA++EA VP  Y +P EHA+VRE+E WIR+KYE +RFV + P
Sbjct:   15 LKKKLNELMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTPEQVQQMQRWGNGRAKAYYEATVPRDYRIPTEHASVREKEMWIREKYERKRFVGQEP 134          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16652.1 vs. uniprot
Match: M4C531_HYAAE (Arf-GAP domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C531_HYAAE)

HSP 1 Score: 169 bits (427), Expect = 7.640e-44
Identity = 76/116 (65.52%), Postives = 96/116 (82.76%), Query Frame = 0
Query:    6 LRKRLETLVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFV 121
            L+K+L  L+K  EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W   QV+ M+  GN RAKAHFEA +P+ Y VP EH++VR++E WIRDKYE +RFV
Sbjct:   17 LKKQLNELMKREENKFCADCGSRGPRWASINLGVFICIACSGIHRSLGVHVTFVRSVNLDSWTTEQVQQMQRWGNARAKAHFEAALPSDYFVPSEHSSVRDKELWIRDKYERKRFV 132          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16652.1 vs. uniprot
Match: A0A2D4C9N7_PYTIN (Arf-GAP domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9N7_PYTIN)

HSP 1 Score: 169 bits (429), Expect = 1.540e-43
Identity = 83/142 (58.45%), Postives = 105/142 (73.94%), Query Frame = 0
Query:    6 LRKRLETLVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRNPQPARQR-KPEESTGSRSSRKDS 146
            L+K L+ L K  EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD W   QV  M++ GN RAKA++EA VP  Y +P EH++VRE+E WIRDKYE +RF +RN  P+ Q  + +   G RS R  S
Sbjct:   17 LKKILDELTKREENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDAWTAEQVAQMQKWGNARAKAYYEAHVPRDYRIPNEHSSVREKEMWIRDKYERKRFAARNEPPSGQDDRDDHDDGERSRRTGS 158          
BLAST of mRNA_E-siliculosus-1a_M_contig86.16652.1 vs. uniprot
Match: H3G6B5_PHYRM (Arf-GAP domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6B5_PHYRM)

HSP 1 Score: 159 bits (401), Expect = 2.200e-43
Identity = 70/111 (63.06%), Postives = 89/111 (80.18%), Query Frame = 0
Query:   10 LETLVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRF 120
            L  L+K  EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W P QV+ M+  GN RAK ++EA VP  + +P EH+ VR++E WIRDKYE +RF
Sbjct:    1 LNDLMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTPEQVQQMQRWGNGRAKGYYEANVPRDFRIPTEHSAVRDKEMWIRDKYERKRF 111          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig86.16652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3P5_9PHAE7.090e-19682.27Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
D8LBT0_ECTSI1.060e-16287.79Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836C8F7_9STRA2.220e-5172.27Arf-GAP domain-containing protein (Fragment) n=1 T... [more]
A0A7S3UXM8_HETAK8.120e-5064.06Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2UT74_9STRA9.640e-4665.32Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa... [more]
G5A4X3_PHYSP2.170e-4562.50Arf-GAP domain-containing protein (Fragment) n=1 T... [more]
A0A3F2RQV0_9STRA8.300e-4564.17Arf-GAP domain-containing protein n=1 Tax=Phytopht... [more]
M4C531_HYAAE7.640e-4465.52Arf-GAP domain-containing protein n=1 Tax=Hyaloper... [more]
A0A2D4C9N7_PYTIN1.540e-4358.45Arf-GAP domain-containing protein n=1 Tax=Pythium ... [more]
H3G6B5_PHYRM2.200e-4363.06Arf-GAP domain-containing protein n=1 Tax=Phytopht... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 401..421
NoneNo IPR availablePANTHERPTHR45705FAMILY NOT NAMEDcoord: 7..447
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 19..38
score: 49.14
coord: 59..80
score: 40.91
coord: 38..55
score: 62.64
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 7..128
e-value: 5.7E-48
score: 175.4
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 8..123
e-value: 8.8E-41
score: 138.7
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 7..128
score: 28.419
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 1..129
e-value: 1.3E-47
score: 163.1
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 7..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig86contigE-siliculosus-1a_M_contig86:320972..323996 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig86.16652.1mRNA_E-siliculosus-1a_M_contig86.16652.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig86 320616..324819 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig86.16652.1 ID=prot_E-siliculosus-1a_M_contig86.16652.1|Name=mRNA_E-siliculosus-1a_M_contig86.16652.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=519bp
MSEQALRKRLETLVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHR
NLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPRE
HATVREREKWIRDKYEHRRFVSRNPQPARQRKPEESTGSRSSRKDSGAAS
SKSPTGKTGSSSSSRAAGRTSSSTSTAPSPAASKATSSTTTRAVPRLQKA
GTGAVKAASAAAAPVALPAPAVDLLDFSEPAPPQAPPKASPPPSRATSAP
PPPPADQMFEFSDFQSAPSSSSSSGATVPSAAASVGSQQQQQQQPAAVQQ
PAAQSAQQGQQEQPAAGAPGKASAASILSMFNSPAGGGVAGRSMAGPVGS
SPVAGVMKTPELNQVSQMMSTLNVGGLAPMGSQQMGMPGAGGWAQQHQPQ
QAQAQAMAWAQQQKLQQLQQQQQLLLQRQQWQMQQQQQQQQNTQGGLNAG
ASGGAMFGVGQAGGHQQHPQGMGAATNGSGLTGLRGGGDGAAQGNGATVV
MPGGLGAGASGMGMGELR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037278ARFGAP/RecO
IPR038508ArfGAP_dom_sf
IPR001164ArfGAP_dom