prot_E-siliculosus-1a_M_contig86.16642.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig86.16642.1
Unique Nameprot_E-siliculosus-1a_M_contig86.16642.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length251
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig86.16642.1 vs. uniprot
Match: D8LBS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS2_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 1.120e-73
Identity = 166/191 (86.91%), Postives = 167/191 (87.43%), Query Frame = 0 
Query:   20 DLMTGRPVQAAERFELQLKEAQNAGDPILEALAERNLADTREVDEDLPGALAHLRRCRALAQRSRNSALEADACRRLSSVYAEIAGQSGGXXXXXXXXXXXXXXPEREKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEREDSEVEFLKSTAADRARLFAERYETAVFGSEWPVSSGNGGELASEEL 210
            DLMTGRPVQAAERFELQLKEAQNAGDPILEALAERNLADTREVDEDLPGALAHLRRCRALAQRSRNSALEADACRRLSSVYAEIAGQSG XXXXXXXXXXXXX PEREK       XXXXXXX          XXXXXXXXX REDS+VEFLKSTAADRARLFAERYETAVFG EWPVSSGNGGEL  E L
Sbjct:  216 DLMTGRPVQAAERFELQLKEAQNAGDPILEALAERNLADTREVDEDLPGALAHLRRCRALAQRSRNSALEADACRRLSSVYAEIAGQSGXXXXXXXXXXXXXXSPEREKGGDHGDGXXXXXXXTQERNRSDSGXXXXXXXXXXREDSDVEFLKSTAADRARLFAERYETAVFGLEWPVSSGNGGELIGEAL 406
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig86.16642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBS2_ECTSI1.120e-7386.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..112
e-value: 8.4E-9
score: 36.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 8..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig86contigE-siliculosus-1a_M_contig86:238597..240700 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig86.16642.1mRNA_E-siliculosus-1a_M_contig86.16642.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig86 238597..240700 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig86.16642.1 ID=prot_E-siliculosus-1a_M_contig86.16642.1|Name=mRNA_E-siliculosus-1a_M_contig86.16642.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=251bp
AATDSARQLALSHAHAGAVDLMTGRPVQAAERFELQLKEAQNAGDPILEA
LAERNLADTREVDEDLPGALAHLRRCRALAQRSRNSALEADACRRLSSVY
AEIAGQSGGGGGGNDGGGGGGGSPEREKDGDHGDGGADGGGGTQERNRSD
SGSPEPEIEIEEREDSEVEFLKSTAADRARLFAERYETAVFGSEWPVSSG
NGGELASEELADDDGEGGEEPGDRRRISSDSGGDRIAEEAAAAVPVAPVA
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf