prot_E-siliculosus-1a_M_contig85.16588.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig85.16588.1
Unique Nameprot_E-siliculosus-1a_M_contig85.16588.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length888
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig85.16588.1 vs. uniprot
Match: D7FZJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ0_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 5.240e-70
Identity = 126/133 (94.74%), Postives = 128/133 (96.24%), Query Frame = 0 
Query:    1 MDRPGVSSYSTSVESAGHALSGLAAFSLLPLFHFQLFFFLLESMGGNGFVLCLAWVIVPSVATRVPRLQVLAARHLREMQAIAGVLLAGSLAAGAAGFLTVRLALSAAGLSVAWGFCQAPHWGRGRGAEVMDG 133
            MDR G SSYS +VESAGHALSGLAAFSLLPLFHFQLFFFLLESMGGNGFVLCLAWV+VPSVATRVPRLQVLAARHLREMQAIAG LLAGSLAAGAAGFLTVRLALSAAGLSVAWGFC APHWGRGRGAEVMDG
Sbjct:   52 MDRLGASSYSAAVESAGHALSGLAAFSLLPLFHFQLFFFLLESMGGNGFVLCLAWVVVPSVATRVPRLQVLAARHLREMQAIAGGLLAGSLAAGAAGFLTVRLALSAAGLSVAWGFCHAPHWGRGRGAEVMDG 184
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig85.16588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZJ0_ECTSI5.240e-7094.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 225..261
NoneNo IPR availablePANTHERPTHR45888FAMILY NOT NAMEDcoord: 222..634
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 428..450
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 683..702
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 708..730
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..177
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 484..682
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 731..741
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 796..888
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 462..483
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 773..795
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 762..772
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..122
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 153..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 451..461
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 703..707
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 742..761
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 178..427
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..152
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 123..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..103
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 222..271
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 36..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig85contigE-siliculosus-1a_M_contig85:137499..148813 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig85.16588.1mRNA_E-siliculosus-1a_M_contig85.16588.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig85 137354..148813 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig85.16588.1 ID=prot_E-siliculosus-1a_M_contig85.16588.1|Name=mRNA_E-siliculosus-1a_M_contig85.16588.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=888bp
MDRPGVSSYSTSVESAGHALSGLAAFSLLPLFHFQLFFFLLESMGGNGFV
LCLAWVIVPSVATRVPRLQVLAARHLREMQAIAGVLLAGSLAAGAAGFLT
VRLALSAAGLSVAWGFCQAPHWGRGRGAEVMDGLVAGNHLALVLRLGAGL
LYPPSPAVRFLETLLLPVLLLLGLWFVPPPPPLHCWRSSRGSSSSCGGRR
FSAGSASWRYLRLFEEGGVAGQQQQQQQRQQQQQQQQQRRQQQTQEQHQQ
AERQQLQTRQRQQTRQQVERQRPSPLGRNCSTAFATAATSAALSGGSGGD
GGGESDDGGGLELAVARVRRRGGEDHERGISRQTRQRRLQRREMPNVGSA
LPSPAEAPPTEAIAPRGSVIGAATEAAAARAAARAAAAAAADGLFSPSSR
PPSPPLPFRRRWQGEDTSQPSLGFLESLVASAGFGGLLFLTVLLAGSPWA
GDDWAPSPGLGVFWSALRQASVVVAWGFGRAFASTAASASSPAGTPAPGT
RAGVACPSAPETAVLLEGGREGEEMMQAAAVPAAPAAPAAASPSTAAPAT
TTSAAAAAAAGSAGEGSQEETKGERNDPAAAAATSVAAAAAVDDNDFDEE
GGLLEAAGTGDDSPAHSPVHSPAEITVAAAGSRRRAGLAAALHTCGAEEE
EFGRSEASAAAATVAAATAAGEVRRGVDDDDDAASCLAAAAVLVAGVSAI
ALCPERPLAVVPGISAVALALPSLWTHLEASCPPGGVGNDGAAVYILLTV
WETALVAFEYAPPLRPLRGTRSYLVLVAALLAASPSALSACRCCWRRAGR
VRARGRPVVVEEPVWDDVGGGGVGDCDGVGVGGVGSGSGDGWSLWRGWWW
RCRWRPLRPPPLPPQPPSVAGSSDGNRCCRDSRTVPPP
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