prot_E-siliculosus-1a_M_contig84.16540.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig84.16540.1
Unique Nameprot_E-siliculosus-1a_M_contig84.16540.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length948
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig84.16540.1 vs. uniprot
Match: D8LQ04_ECTSI (USP7_ICP0_bdg domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ04_ECTSI)

HSP 1 Score: 704 bits (1816), Expect = 2.520e-240
Identity = 642/956 (67.15%), Postives = 648/956 (67.78%), Query Frame = 0
Query:   33 MAQRNIFIDPQGFVRISVKIIDVREAYFRVATDVDLARSVTGRGGGGDFADWRTCLPAKSFKHDQLLYVIQKVSELTGVPLVSCRPWLCMPRKNRNGPPGPLRPAAALLPQHLQMSICEILAAHAATKQDQPPLSIHYPPVVSGSNEPEFVFVGKAMAHRTDRGCELVPIALSLAHLPEGLNLEVFEQITPEEVRRFSGDKTVAEAGLSHGSILLFRSAQQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHATVTHAPKPAFPPARSGGIDAXXXXXXXXXXXXXXXXXXXXXXXXXXKGEKSAPGWDGGPAAVVGRAASPPGEIPVVMDPAAQRRATCLALFQVQENQRQHQAKEAARAVAKKLAAEXXXXXXKEKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLTPAQQAEVAXXXRMAAHAAAVEHAQSKAQAYRTVSIMEALREGAPPTSTPP--QPQPPAPVTGSVVARQAASAXXXXXXXXXXXXXXXXXXXXX-AASGEGTDGKAGVVSSGGXXXXXXXXXXXXXXXXXXXTATAASAPGKKANGEESANTASSDGSSTDCXXXXXXXXXXKSRVVADANGGAAVVAGKTKNEGTAKPSTGASQPVVPQASPENGGXXXXXXXXXXXXXXXXXXXXXXXXXXAGDEGAPESAAAIPAEMQRRSSXXXXXXXXXXIQSSARAGTRXXXXXXXXXXXXXXXXXXXSDGSSKSPRGGXXXXXXXXXXXXXXXXXXXXXXXXXAKTTDARGGGGGEEAAPAASPAPSADLASFIAQLMHVPGFTMEKCMELTRSKERAEIA--------------------------------------SAIKTISHDEKDSFRSRQLERLLAIKEKETSTDGDGDDGGD 947
            MAQRNIFIDPQGFVRISVKIIDVREAYFRVATDVDLARSVTGRGGGGDFADWRTCLPAKSFKHDQLLYVIQKVSELTGVPLVSCRPWLCMPRKNRNGPPGPLRPAAALLPQHLQMSICEILAAHAATKQDQPPLSIHYPPVVSGSNEPEFVFVGKAMAHRTDRGCELVPIALSLAHLPEGLNLEVFEQITPEEVRRF+GDKTVAEAGLSHGSILLFRSAQQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    AHATVTHAPKPAFPPARSG I+     XXXXXXXXXXXXXXXXXXXXXXKGEKSAPGWDGGPAAVVGR ASPPGEIPVVMDPAAQRRATCLALFQVQENQRQHQAKEAARAVAKKLAAE      KEKL     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           LTPAQQAEVA  XRMAAHAAAVEHAQSKAQAYRTVSIMEALREGAPP STPP  Q QP AP  GSVVA+QAA AXXXXXXXXXXXXXXXX      AASGEGTDGKAG VSSGG                                                                            K   +GT                                                G +G    +A           XXXXXXXXXX          XXXX                                                                   PAASPAPSADLASFIAQLMHVPGFTMEKCMELTRSKERAEIA                                      SAIKTISHDEKDSFRSRQLERLLAIKEKETSTDGDGDDGGD
Sbjct:    1 MAQRNIFIDPQGFVRISVKIIDVREAYFRVATDVDLARSVTGRGGGGDFADWRTCLPAKSFKHDQLLYVIQKVSELTGVPLVSCRPWLCMPRKNRNGPPGPLRPAAALLPQHLQMSICEILAAHAATKQDQPPLSIHYPPVVSGSNEPEFVFVGKAMAHRTDRGCELVPIALSLAHLPEGLNLEVFEQITPEEVRRFNGDKTVAEAGLSHGSILLFRSAQQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMA--AHATVTHAPKPAFPPARSGRIEDAVAAXXXXXXXXXXXXXXXXXXXXXXKGEKSAPGWDGGPAAVVGRVASPPGEIPVVMDPAAQRRATCLALFQVQENQRQHQAKEAARAVAKKLAAEAVLTSAKEKLKKIATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------QFLTPAQQAEVAAAXRMAAHAAAVEHAQSKAQAYRTVSIMEALREGAPPMSTPPPAQLQPSAPAMGSVVAQQAAVAXXXXXXXXXXXXXXXXVPARVPAASGEGTDGKAGGVSSGGDD--------------------------------------------------------------------------KLAGKGT------------------------------------------------GVDGGSTGSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------PAASPAPSADLASFIAQLMHVPGFTMEKCMELTRSKERAEIAAGSSDKAIRVWDLATGVALALFKGHKDDVESIDFSAIASAIKTISHDEKDSFRSRQLERLLAIKEKETSTDGDGDDGGD 756          
BLAST of mRNA_E-siliculosus-1a_M_contig84.16540.1 vs. uniprot
Match: A0A6H5LAN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAN8_9PHAE)

HSP 1 Score: 464 bits (1195), Expect = 7.750e-148
Identity = 582/771 (75.49%), Postives = 585/771 (75.88%), Query Frame = 0
Query:  189 MAHRTDRGCELVPIALSLAHLPEGLNLEVFEQITPEEVRRFSGDKTVAEAGLSHGSILLFRSAQQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--------HATVTHAPKPAFPPARSGGIDAXXXXXXXXXXXXXXXXXXXXXXXXXXKGEKSAPGWDGGPAAVVGRAASPPGEIPVVMDPAAQRRATCLALFQVQENQRQHQAKEAARAVAKKLAAEXXXXXXKEKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLTPAQQAEVAXXXRMAAHAAAVEHAQSKAQAYRTVSIMEALREGAPPTSTPPQPQPPAP----VTGSVVARQAASAXXXXXXXXXXXXXXXXXXXXXAASGEGTDGKAGVVSSGGXXXXXXXXXXXXXXXXXXXTATAASAPGKKANGEESANTASSDGSSTDCXXXXXXXXXXKSRVVADANGGAAVVAGKTKNEGTAKPSTGASQPVVPQASPENGGXXXXXXXXXXXXXXXXXXXXXXXXXXAGDEGAPESAAAIPAEMQRRSSXXXXXXXXXXIQSSARAGTRXXXXXXXXXXXXXXXXXXXSDGSSKSPRGGXXXXXXXXXXXXXXXXXXXXXXXXXAKTTDARGGGGGEEAAPAASPAPSADLASFIAQLMHVPGFTMEKCMELTRSKERAEIASAIKTISHDEKDSFRSRQLERLLAIKEKETSTDGDGDDGGD 947
            MAHRTDRGCELVPIALSLAHLPEGL LEVFEQITPEEVRRFSGDKTVAEAGLSHGS+LLFRSAQQE       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         HATVTHAPKPAFP         XXXXXXXXXXXXXXXXXXXXXXXXXXKGEKSAPGWDGGPAAVVGRAASP GEIPVVMDPAAQRRATCLALFQVQENQRQ +AKEAARAVAK     XXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLTPAQQAEVAXXXRMAAHAAAVEHAQSKAQAYRTVSIMEALREGAPPTSTPPQ          V GSV AR     XXXXXXXXXXXXXXXXXXXXX                  XXXXXXXXXXXXXXXXXXX                                   XXXXX     ADANGGAAVVAGKTKNEGTAKPST  SQPVV Q S ENGG                          AGDEGAPES A IPAEMQRRSS      XX  IQSSARAGTR    XX             SDGSSKSPR  XXXXXXXXXXXXXXXXXXXXXXXXX             EAAPAASPAPSADLASFIAQLMHVPGFTMEKCMELTRSKERAEIASAI+TISHDEKDSFRSRQLERLLAIKEKETSTDGD DDGGD
Sbjct:    1 MAHRTDRGCELVPIALSLAHLPEGLKLEVFEQITPEEVRRFSGDKTVAEAGLSHGSVLLFRSAQQETTPSPCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATVTHAPKPAFP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEKSAPGWDGGPAAVVGRAASPSGEIPVVMDPAAQRRATCLALFQVQENQRQQRAKEAARAVAKXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLTPAQQAEVAXXXRMAAHAAAVEHAQSKAQAYRTVSIMEALREGAPPTSTPPQXXXXXXXXXXVMGSVAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------XXXXXXXXXPADANGGAAVVAGKTKNEGTAKPSTATSQPVVRQVSSENGGKKEVDPSSGAAPGTARATRTSRSTAPAGDEGAPESVATIPAEMQRRSSRKAAAVXXQQIQSSARAGTRGGNSXXG------------SDGSSKSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAPAASPAPSADLASFIAQLMHVPGFTMEKCMELTRSKERAEIASAIRTISHDEKDSFRSRQLERLLAIKEKETSTDGDRDDGGD 725          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig84.16540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQ04_ECTSI2.520e-24067.15USP7_ICP0_bdg domain-containing protein n=1 Tax=Ec... [more]
A0A6H5LAN8_9PHAE7.750e-14875.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024729Ubiquitin carboxyl-terminal hydrolase 7, ICP0-binding domainPFAMPF12436USP7_ICP0_bdgcoord: 182..261
e-value: 3.7E-7
score: 29.7
NoneNo IPR availableGENE3D3.10.20.90coord: 177..266
e-value: 6.9E-6
score: 28.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig84contigE-siliculosus-1a_M_contig84:379387..387641 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig84.16540.1mRNA_E-siliculosus-1a_M_contig84.16540.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig84 379387..387641 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig84.16540.1 ID=prot_E-siliculosus-1a_M_contig84.16540.1|Name=mRNA_E-siliculosus-1a_M_contig84.16540.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=948bp
QVEPVKTQFLLHKFNAQATDFGYTRAFEHEVIMAQRNIFIDPQGFVRISV
KIIDVREAYFRVATDVDLARSVTGRGGGGDFADWRTCLPAKSFKHDQLLY
VIQKVSELTGVPLVSCRPWLCMPRKNRNGPPGPLRPAAALLPQHLQMSIC
EILAAHAATKQDQPPLSIHYPPVVSGSNEPEFVFVGKAMAHRTDRGCELV
PIALSLAHLPEGLNLEVFEQITPEEVRRFSGDKTVAEAGLSHGSILLFRS
AQQETTPSPSPPQQTAAAAPPPQEQQATPPPPPQQQQQPKQEEQQPAVTV
PPASTVSSVVPFNTAAAAAAAAAMAAHATVTHAPKPAFPPARSGGIDAAV
AAAASAATSSGPTVTTAGGGDGGGKGEKSAPGWDGGPAAVVGRAASPPGE
IPVVMDPAAQRRATCLALFQVQENQRQHQAKEAARAVAKKLAAEAALTAA
KEKLKKNATSSSSSAAAAAAAAAASAKTADGESKAAAAAAVAAATAAAAA
AAAEAPPPHVLTPAQQAEVAAAARMAAHAAAVEHAQSKAQAYRTVSIMEA
LREGAPPTSTPPQPQPPAPVTGSVVARQAASASASASARVSAPPPAAVPA
RVPAASGEGTDGKAGVVSSGGDGKQAGKGTGVDGGSTGSATATAASAPGK
KANGEESANTASSDGSSTDCSSSSSSSSCCKSRVVADANGGAAVVAGKTK
NEGTAKPSTGASQPVVPQASPENGGKKEIDPSGGAAPGTARATRASRGTA
PAGDEGAPESAAAIPAEMQRRSSRKAAAVAAQQIQSSARAGTRGGNSGSG
SGSGSVSGGASGSDGSSKSPRGGDGDDGGSGQKRQAEAGEGGGGPRKSAK
TTDARGGGGGEEAAPAASPAPSADLASFIAQLMHVPGFTMEKCMELTRSK
ERAEIASAIKTISHDEKDSFRSRQLERLLAIKEKETSTDGDGDDGGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024729USP7_ICP0-binding_dom