prot_E-siliculosus-1a_M_contig84.16537.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig84.16537.1
Unique Nameprot_E-siliculosus-1a_M_contig84.16537.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length268
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig84.16537.1 vs. uniprot
Match: D8LQ02_ECTSI (C-CAP/cofactor C-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ02_ECTSI)

HSP 1 Score: 400 bits (1028), Expect = 5.170e-139
Identity = 242/260 (93.08%), Postives = 245/260 (94.23%), Query Frame = 0 
Query:    1 MSSSVLKTIAARNAAQRRRVVEKKHGETIDVPEGTGLLVTGCSGCTVNAPGRSSSVTVERCDAGTTVNVGSVVASLEIIHCTDVQVSVARCRTITXXXXXXXTLTCKCQPPSGQXXXXXXXXXXXXXXXXXXXEAKVQPSEAADEASAIRLFTSCSEGVTVRYEGLLSQPSPGPVAAADPAVAADATAVTYHIPKDWRHENGDGPRSVTRVSGAGSGXXXXXXXXACCKTLRCDQYGIPLEEVEAAEAGVAWTWEHGRGG 260
            MSSSVLKTIAARNAAQRRRVVEKKHGETIDVPEG+GLLVTGCSGCT+NAPGRSSSVTVERCDAGTTVNVGSVVASLEIIHCTDVQVSVARCRTI XXXXXXX    KCQPPSG XXXXXXXXXXXXXXXXXX E KVQPSEAADEASAIRLFTSCSEGVTVRYEGLLS+P PGPVAAADPAVAADATAVTY IPKDWRHENGD PRSVTRVSGAGSGXXXX    ACCKTLRCDQYGIPLEEVEAAEAGVAWTWEHGRGG
Sbjct:    1 MSSSVLKTIAARNAAQRRRVVEKKHGETIDVPEGSGLLVTGCSGCTINAPGRSSSVTVERCDAGTTVNVGSVVASLEIIHCTDVQVSVARCRTIXXXXXXXXXXXXKCQPPSGXXXXXXXXXXXXXXXXXXX-EVKVQPSEAADEASAIRLFTSCSEGVTVRYEGLLSKPPPGPVAAADPAVAADATAVTYRIPKDWRHENGDTPRSVTRVSGAGSGXXXX----ACCKTLRCDQYGIPLEEVEAAEAGVAWTWEHGRGG 255
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig84.16537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ02_ECTSI5.170e-13993.08C-CAP/cofactor C-like domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016098Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminalGENE3D2.160.20.70coord: 7..117
e-value: 4.8E-12
score: 47.3
IPR013912Adenylate cyclase-associated CAP, C-terminalPFAMPF08603CAP_Ccoord: 34..103
e-value: 1.1E-8
score: 34.8
IPR017901C-CAP/cofactor C-like domainPROSITEPS51329C_CAP_COFACTOR_Ccoord: 3..154
score: 12.812
IPR036223Adenylate cyclase-associated CAP, C-terminal superfamilySUPERFAMILY69340C-terminal domain of adenylylcyclase associated proteincoord: 29..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig84contigE-siliculosus-1a_M_contig84:360509..362279 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig84.16537.1mRNA_E-siliculosus-1a_M_contig84.16537.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig84 360273..362279 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig84.16537.1 ID=prot_E-siliculosus-1a_M_contig84.16537.1|Name=mRNA_E-siliculosus-1a_M_contig84.16537.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=268bp
MSSSVLKTIAARNAAQRRRVVEKKHGETIDVPEGTGLLVTGCSGCTVNAP
GRSSSVTVERCDAGTTVNVGSVVASLEIIHCTDVQVSVARCRTITVDVST
DVTLTCKCQPPSGQEAEQQQQQQQQQQQQGGGGEAKVQPSEAADEASAIR
LFTSCSEGVTVRYEGLLSQPSPGPVAAADPAVAADATAVTYHIPKDWRHE
NGDGPRSVTRVSGAGSGGGGGGGGGACCKTLRCDQYGIPLEEVEAAEAGV
AWTWEHGRGGSRGSSRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036223CAP_C_sf
IPR017901C-CAP_CF_C-like
IPR013912Adenylate_cyclase-assoc_CAP_C
IPR016098CAP/MinC_C