prot_E-siliculosus-1a_M_contig84.16522.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig84.16522.1
Unique Nameprot_E-siliculosus-1a_M_contig84.16522.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length199
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig84.16522.1 vs. uniprot
Match: D8LPY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY8_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 3.730e-47
Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = 0 
Query:    1 EDGGQSQQQLAVAGGNANDWQMFYDEESADEPIPWWYNSVTGESTWDCPTALTAAAASSTSAAGVNADEPKAQNMELAIVKTVDKSTWTQLWSEEYQ 97
            EDGGQ Q+QLAVAGGNA+DWQMFYDEESADEPIPWWYNSVTGESTWDCPTAL AAAASST+AAGVN DEPKAQ+MELAIV+TVD STW QLWSEEYQ
Sbjct: 5371 EDGGQPQRQLAVAGGNASDWQMFYDEESADEPIPWWYNSVTGESTWDCPTALKAAAASSTTAAGVNEDEPKAQHMELAIVETVDISTWAQLWSEEYQ 5467
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig84.16522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPY8_ECTSI3.730e-4789.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.70.10coord: 13..63
e-value: 1.3E-5
score: 26.3
NoneNo IPR availableGENE3D2.20.70.10coord: 79..124
e-value: 5.2E-6
score: 27.8
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 88..117
score: 9.714
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 14..51
score: 8.552

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig84contigE-siliculosus-1a_M_contig84:129102..130496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig84.16522.1mRNA_E-siliculosus-1a_M_contig84.16522.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig84 129102..130496 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig84.16522.1 ID=prot_E-siliculosus-1a_M_contig84.16522.1|Name=mRNA_E-siliculosus-1a_M_contig84.16522.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=199bp
EDGGQSQQQLAVAGGNANDWQMFYDEESADEPIPWWYNSVTGESTWDCPT
ALTAAAASSTSAAGVNADEPKAQNMELAIVKTVDKSTWTQLWSEEYQQVY
YYFNEATQEASWDAPATEKTTTTTEENCSGAQGEEGGDGGAGGVSHESHG
SDVDSGQNQPLVLPSLANSTSAGDNAESQFPFYVNERGNRVFCVPRRI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom