prot_E-siliculosus-1a_M_contig83.16510.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig83.16510.1
Unique Nameprot_E-siliculosus-1a_M_contig83.16510.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length828
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig83.16510.1 vs. uniprot
Match: D7FZG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG4_ECTSI)

HSP 1 Score: 858 bits (2218), Expect = 1.820e-305
Identity = 549/714 (76.89%), Postives = 554/714 (77.59%), Query Frame = 0
Query:  116 MIDDVLTSCLPVAAMAESTAAXXXXXXXXXXXXXXXXXXXXXXXXXASGVPLPRTPAVASTLXXXXXXXXXXXXGSVSSMDWD--PSPTSKQIAMPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSRRASGSIFADRVGITRIPDRAWTIALDYLELGEGMRCRQLGRVFRDTVEASLSVLALSGVNTITWATPDNLAFLTRFKNRGRGGRDRGXXXXXAADRYGAAAGEKTLRVADCCPVRAWSYLLGALTKIEEVIIVEGAETDEKALEEVWLHLLPLCRNLRSFFLNFEDYSQCPVDGDHPPINVKKFAVFLQAKRPFPKLRELHLELGSMSIAEQRSLIRGLSSSGLLPQLEKVTLGDGTTSYVRSPGRGPGRDLFAAFRKTPCLKLRVLWLQRLDLWDDLDALASALGPAHCPVLEELFLDLALDTDDVERLAGCLHKFPKSLKTLGVLAVAIKNRTQDGQFEMADPEPALQRLADALCKHPRPTLQCLDISLHYEPEAEEELPPDEPPQPPPFKARAATMPIIRLLKSGKLTGIKHVQLSSCSLDDSGLAIACKAVATMTGIQTLDISSNQLSLTGAKALAKALWRCRSLHEIVLEESVVPDDTAAVSAVFKEYMPWATVRVDDRDGRKNLARRYLAAAGGQGLAYDAVADDEGAFNDEXXXXXXGQGDNGAFDLMDPHHWEAVDAESDGEVPPELMMDDDTD 827
            MIDDVLTSCLPVAAMAESTAAXXXXXXXXXXXXXXXX              LPR P      XXXXXXXXXXXX           PSPTSKQIAMP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +SRRASG IFADRVGITRIPDRAWTIALDYLELGEGMRCRQLGR FRDTVEASLSVLALSGVNTITWATPDNLAFLTRFKN       R       ADRYGAAAGEKTLRVADCCPVRAWSYLLGALTK                                                                                                     LEKVTLGDGTTSYVRSPGRGPGRDLFAAFRKTPC KLRVLWLQRLDLWDDLDALASALGPAHCPVLEELFLDLALDTDDVERLAGCLHKFPKSLKTLGVLAVAIKNRT+DGQFEMADPEPALQRLADALCKHPRPTLQCLDISLHYEPEAEEELPPDEPPQPPPFKARAATMPIIRLLKSGKLTGIKHVQLSSCSLDDSGLAIACKAVATMTGIQTLDISSNQLSLTGAKALAKALWRCRSLHEIVLEESVVPDDTAAVSAVFKEYMPWATVRVDDRDGRKNLARRYLAAAGGQG AYDA+ADD+GAF+D XXXXXX     G FDLMDPHHWEAVDAESDGEVPPELMMDDDTD
Sbjct:    1 MIDDVLTSCLPVAAMAESTAAXXXXXXXXXXXXXXXXS-------------LPRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPTSKQIAMP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMSRRASGLIFADRVGITRIPDRAWTIALDYLELGEGMRCRQLGRAFRDTVEASLSVLALSGVNTITWATPDNLAFLTRFKNV------RTLHWGGGADRYGAAAGEKTLRVADCCPVRAWSYLLGALTK-----------------------------------------------------------------------------------------------------LEKVTLGDGTTSYVRSPGRGPGRDLFAAFRKTPCAKLRVLWLQRLDLWDDLDALASALGPAHCPVLEELFLDLALDTDDVERLAGCLHKFPKSLKTLGVLAVAIKNRTEDGQFEMADPEPALQRLADALCKHPRPTLQCLDISLHYEPEAEEELPPDEPPQPPPFKARAATMPIIRLLKSGKLTGIKHVQLSSCSLDDSGLAIACKAVATMTGIQTLDISSNQLSLTGAKALAKALWRCRSLHEIVLEESVVPDDTAAVSAVFKEYMPWATVRVDDRDGRKNLARRYLAAAGGQGQAYDALADDQGAFDDXXXXXXXXXXXXGGFDLMDPHHWEAVDAESDGEVPPELMMDDDTD 593          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16510.1 vs. uniprot
Match: A0A6H5KYL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYL0_9PHAE)

HSP 1 Score: 709 bits (1830), Expect = 4.060e-250
Identity = 357/376 (94.95%), Postives = 364/376 (96.81%), Query Frame = 0
Query:  452 MSIAEQRSLIRGLSSSGLLPQLEKVTLGDGTTSYVRSPGRGPGRDLFAAFRKTPCLKLRVLWLQRLDLWDDLDALASALGPAHCPVLEELFLDLALDTDDVERLAGCLHKFPKSLKTLGVLAVAIKNRTQDGQFEMADPEPALQRLADALCKHPRPTLQCLDISLHYEPEAEEELPPDEPPQPPPFKARAATMPIIRLLKSGKLTGIKHVQLSSCSLDDSGLAIACKAVATMTGIQTLDISSNQLSLTGAKALAKALWRCRSLHEIVLEESVVPDDTAAVSAVFKEYMPWATVRVDDRDGRKNLARRYLAAAGGQGLAYDAVADDEGAFNDEXXXXXXGQGDNGAFDLMDPHHWEAVDAESDGEVPPELMMDDDTD 827
            MSIAEQRSLIRGLSSSGLLPQLEKVTLGDGTTSYVRSPGRGPGRDLFAAFRKTPC+KLRVLWLQRLDLWDDLDALASALGPAHCPVLEELFLDLALDTDDVERLAGCLHKFPKSLKTLGVLAVAIKNRTQDGQFEMADPEPALQRLADALCKHPRPTLQCLDISLHYEPEAEEELPPDEPPQPPPFKARAATMPIIRLLKSGKLTGIKHVQLSSCSLDDSGLAIACKAVATMTGIQTLDISSNQLSLTGAKALAKALWRCRSLHEIVLEESVVPDD AAVSAVFKEYMPWATVRVDDRDGRKNLARRYLAAAGGQG A+DAVADD+GAF+DE      GQ D+  FD+M PHHWEAVDAESDGEVPPEL+MDDDTD
Sbjct:    1 MSIAEQRSLIRGLSSSGLLPQLEKVTLGDGTTSYVRSPGRGPGRDLFAAFRKTPCVKLRVLWLQRLDLWDDLDALASALGPAHCPVLEELFLDLALDTDDVERLAGCLHKFPKSLKTLGVLAVAIKNRTQDGQFEMADPEPALQRLADALCKHPRPTLQCLDISLHYEPEAEEELPPDEPPQPPPFKARAATMPIIRLLKSGKLTGIKHVQLSSCSLDDSGLAIACKAVATMTGIQTLDISSNQLSLTGAKALAKALWRCRSLHEIVLEESVVPDDAAAVSAVFKEYMPWATVRVDDRDGRKNLARRYLAAAGGQGQAHDAVADDQGAFSDEEGGDNNGQEDDVVFDMMGPHHWEAVDAESDGEVPPELVMDDDTD 376          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16510.1 vs. uniprot
Match: A0A835Z7K9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7K9_9STRA)

HSP 1 Score: 309 bits (791), Expect = 4.880e-90
Identity = 194/490 (39.59%), Postives = 274/490 (55.92%), Query Frame = 0
Query:  287 VFRDTVEASLSVLALSGVNTIT--WATPDNLAFLTRFKNRGRGGRDRGXXXXXAADRY---GAAAGEKTLRVADCC--PVRAWSYLLGALTKIEEVIIVEGAETDEKALEEVWLHLLPLCR-NLRSFFLNFEDYSQCPVDG----DHPPINVKKFAVFLQAKRPFPKLRELHLELGSMSIAEQRSLIRGLSSSGLLPQLEKVTLGDGTTSYVRSPGRGPGRDLFAAFRKTPCLKLRVLWLQRLDLWDDLDALASALG-PAHCPVLEELFLDLALDTDDVERLAGCLHKFPKSLKTLGVLAVAIKNRTQDGQFEMADPEPALQRLADALCKHPRPTLQCLDISLHYE--PEAEEE---LPPDEPPQPPPFKARAATMPIIRLLKSGKLTGIKHVQLSSCSLDDSGLAIACKAVATMTGIQTLDISSNQLSLTGAKALAKALWRC-RSLHEIVLEESVVPDDTA-AVSAVFKEYMP-----WATVRVDDRDG 751
            V +D  E +   +A+  +NT+   W +P  LA L +F+      R +        D     G+   E+T R  +    P+  W+YLL  L  + +V I EG  T+E+ALEE+W  +LPLC   LR   L+FE Y+   ++G    DHPP+NVK  AV L   RPFP LRELHLEL SMSI EQRSL+RGL   G+L +LE +T+G GT++Y R P +GPG+DL AA  K     L +LWLQRLD+WDD + +  ALG PA CP L +L+LDL LD +D + LA  LH  P SLKTLG++ + I  R   G F+   PE  ++ +A A+  HPR  L+C+D+ LHYE  P+  EE   + P  PP PP    R   +P++  L+      + H+QL +C L     +      A +  +QTLDIS N++S    + L  AL      ++EI+ EE V  D+ A  ++A+ +   P     W +    +R+G
Sbjct:  133 VSKDVRERACETMAVMSLNTLKGDWVSPAALASLCKFR------RVKALHWCVGMDEEEEEGSEGHERT-RPEEWLGRPLMVWTYLLARLP-LTDVTITEGPATNEQALEELWERVLPLCAPTLRRLALSFEGYAAREMEGEQDVDHPPVNVKHLAVVLARDRPFPHLRELHLELNSMSITEQRSLVRGLGQGGVLQRLESLTIGGGTSAYAR-PAKGPGKDLAAAITKHGAPNLSLLWLQRLDIWDDFEGVFRALGDPALCPSLRQLYLDLTLDIEDSKALAAALHLCPPSLKTLGMMVMGITARDDQGNFKRCSPEAGVEVIAKAMLAHPRDDLECVDLCLHYEDAPDDNEEPEPIDPAHPPPPPGLSQRRDAVPLLEALRGAAAPRLLHLQLPNCRLTGKAFSEVLSTAAALPRLQTLDISGNEMSEVLVEELVAALTTSVPHVYEIMAEECVKTDEEANTLAALCRARAPRVKFSWKSRDAAEREG 613          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16510.1 vs. uniprot
Match: A0A835YQN0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQN0_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.020e-69
Identity = 169/468 (36.11%), Postives = 238/468 (50.85%), Query Frame = 0
Query:  263 DRAWTIALDYLELGEGMRCRQLGRVFRDTVEASLSVLALSGVNTITWATPDNLAFLTRFKN----------------------RGRGGRD--RGXXXXXAADRYGAAAGEKTLRVADCC-----PVRAWSYLLGALTKIEEVIIVEGAETDEKALEEVWLHLLPLCR-NLRSFFLNFEDYSQCPVDGD--------------------------HPPINVKKFAVFLQAKRPFPKLRELHLELGSMSIAEQRSLIRGLSSSGLLPQLEKVTLGDGTTSYVRSPGRGPGRDLFAAFRKTPCLKLRVLWLQRLDLWDDLDALASALGPAH-CPVLEELFLDLALDTDDVERLAGCLHKFPKSLKTLGVLAVAIKNRTQDGQFEMADPEPALQRLADALCKHPRPTLQCLDISLHYEPEAE---EELPPDEPPQPPPFKARA--ATMPIIRLLKSGKLTGIKHVQLSSCSL 668
            D  W +ALD+L+L + +   +  R        +++VL+L GV    W  P  LA +TRF+                           G +          +   GAA  +++ R          P+  W++LL  L  ++ V I  G   DE AL E+W  +LP C   LR F L FE Y   P  GD                          +PPINVK+FA+ L  + PFP LRELHLEL SMSI+EQRSL+RG++  GLL +LE +T+G GT+ Y R P  G G++L  A R+     LR+LWLQR D+WDD   + SAL     CP L+EL++D  LD DD   LA  L   P  LKTLG++ +A++ R   G F+   P PA+  +A AL +  RP L C+D+ LH+EP  E   +E   DE P PPP       A++P++R  ++G +  ++H+QL +C L
Sbjct:  161 DAGWALALDFLDLHDVVAVTRTARELAHRAHETMTVLSLHGVRG-GWVGPHALAAITRFRRVRTLHWCVGALPAPPPPETPLVEPEDGEETYESRRHRCQSSSGGAARDDESRRHCPAQQWYGEPLMVWTFLLARLPLLD-VTITPGVANDEDALGELWERVLPACAPQLRRFALAFEGYQPPPPQGDXXXXXXXXXXXXXXXXXPSDQPPPIDYPPINVKRFALMLATRNPFPALRELHLELSSMSISEQRSLVRGITQGGLLARLECLTMGGGTSVYAR-PKIGAGQELATALREHGAPNLRLLWLQRFDVWDDFPGVFSALSDRTLCPALKELYIDATLDHDDTLALAAALPLVPTCLKTLGMMVMALRERDHLGYFKRVSPVPAVTAIATALLEAQRPQLGCVDLCLHFEPPQEGETDEWYSDELPPPPPADKSPVDASIPLLRAFQAGAVPNMRHLQLPNCRL 625          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16510.1 vs. uniprot
Match: A0A6H5L111_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L111_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 2.000e-62
Identity = 162/218 (74.31%), Postives = 164/218 (75.23%), Query Frame = 0
Query:   65 MSFRGRPSLSGTPGRSSLEPSSDSLDLAKLRADLVAARELTCFQARPDCQSMIDDVLTSCLPVAAMAESTAAXXXXXXXXXXXXXXXXXXXXXXXXXASGVPLPRTPAVASTLXXXXXXXXXXXXGSVSSMDWDPSPTSKQIAMPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----ALSRRASGSIFADRVGITRIPDRAWTIALDYLELGE 277
            MSFRGRPSLSGTPGRSSLEPSSDSLDLAKLRADLVAARELTCFQARPDCQSMIDDVLTSCLP+AAMAE T+A                XXXXXX   AS VPL RTPA     XXXXXXXXXXXX  VSSMDWDPSPTSKQIAMPP              X     XXXXXXXXXXX      LSRRASGSIFADRVGITRIPDRAWTIALDYLELGE
Sbjct:    1 MSFRGRPSLSGTPGRSSLEPSSDSLDLAKLRADLVAARELTCFQARPDCQSMIDDVLTSCLPLAAMAEFTSAAPAARLGAAAADSAAEXXXXXXPVDASVVPLTRTPAXXXXXXXXXXXXXXXXXXXVSSMDWDPSPTSKQIAMPPSSSSIGGGAGRGGSXVSRSGXXXXXXXXXXXXXXXGVLSRRASGSIFADRVGITRIPDRAWTIALDYLELGE 218          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FZG4_ECTSI1.820e-30576.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYL0_9PHAE4.060e-25094.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7K9_9STRA4.880e-9039.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YQN0_9STRA1.020e-6936.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5L111_9PHAE2.000e-6274.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 388..619
e-value: 1.4E-6
score: 29.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 639..737
e-value: 3.8E-13
score: 51.3
NoneNo IPR availablePANTHERPTHR24107FAMILY NOT NAMEDcoord: 431..797
NoneNo IPR availablePANTHERPTHR24107:SF2MAP-HOMOLOGOUS PROTEIN 1coord: 431..797
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..30
score: 6.0
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 398..724

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig83contigE-siliculosus-1a_M_contig83:656629..673338 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig83.16510.1mRNA_E-siliculosus-1a_M_contig83.16510.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig83 655985..673339 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig83.16510.1 ID=prot_E-siliculosus-1a_M_contig83.16510.1|Name=mRNA_E-siliculosus-1a_M_contig83.16510.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=828bp
MILRTKPPAYPYPDCGAPCHCCVQLAGCACCASTKQTARQPRCCCVWSRR
ESHSERKAPISVDAMSFRGRPSLSGTPGRSSLEPSSDSLDLAKLRADLVA
ARELTCFQARPDCQSMIDDVLTSCLPVAAMAESTAAAAAARLGAAAAEAA
AEAQSEAAPVDASGVPLPRTPAVASTLAAAAATTADADAGSVSSMDWDPS
PTSKQIAMPPSSSSIGGGAGRGGSGVSRSGGGQVGGGGGGGALSRRASGS
IFADRVGITRIPDRAWTIALDYLELGEGMRCRQLGRVFRDTVEASLSVLA
LSGVNTITWATPDNLAFLTRFKNRGRGGRDRGGGGGGAADRYGAAAGEKT
LRVADCCPVRAWSYLLGALTKIEEVIIVEGAETDEKALEEVWLHLLPLCR
NLRSFFLNFEDYSQCPVDGDHPPINVKKFAVFLQAKRPFPKLRELHLELG
SMSIAEQRSLIRGLSSSGLLPQLEKVTLGDGTTSYVRSPGRGPGRDLFAA
FRKTPCLKLRVLWLQRLDLWDDLDALASALGPAHCPVLEELFLDLALDTD
DVERLAGCLHKFPKSLKTLGVLAVAIKNRTQDGQFEMADPEPALQRLADA
LCKHPRPTLQCLDISLHYEPEAEEELPPDEPPQPPPFKARAATMPIIRLL
KSGKLTGIKHVQLSSCSLDDSGLAIACKAVATMTGIQTLDISSNQLSLTG
AKALAKALWRCRSLHEIVLEESVVPDDTAAVSAVFKEYMPWATVRVDDRD
GRKNLARRYLAAAGGQGLAYDAVADDEGAFNDEEGGDNDGQGDNGAFDLM
DPHHWEAVDAESDGEVPPELMMDDDTD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf