prot_E-siliculosus-1a_M_contig83.16452.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig83.16452.1
Unique Nameprot_E-siliculosus-1a_M_contig83.16452.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length172
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig83.16452.1 vs. uniprot
Match: D7G8D6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D6_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 1.580e-109
Identity = 166/173 (95.95%), Postives = 169/173 (97.69%), Query Frame = 0 
Query:    1 MPEPRVPRFRVPAALVSPASLFLVGGIVYYFSLDKPSEDELNSNIGKEFPDVVRGRHEVDDRMKEFFKRVNNNDPREEERMRDLLNKGKGSHYSAKRRHATTKDIEEFGFVSKPAGASSSQTAPXXXXXXX--MSPLAENKRPPGWGSKTIPSQKPAVEEEGGAPRRRWWRFW 171
            MPEPRVPRFRVPAALVSPASLFLVGGIVYYFSLDKPSEDELNSNIGKEFPDVVRGRHEVDDRMKEFFKRVNNNDPREEERMRDLLNKGKGSHYSAKRRHATTKDIEEFGF+SKPAG SSSQTAPXXXXXXX  ++PLAENKRPPGWGSKTIPSQKPAVEEEGG PRRRWWRFW
Sbjct:    1 MPEPRVPRFRVPAALVSPASLFLVGGIVYYFSLDKPSEDELNSNIGKEFPDVVRGRHEVDDRMKEFFKRVNNNDPREEERMRDLLNKGKGSHYSAKRRHATTKDIEEFGFISKPAGTSSSQTAPXXXXXXXXXIAPLAENKRPPGWGSKTIPSQKPAVEEEGGTPRRRWWRFW 173
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8D6_ECTSI1.580e-10995.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..171
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig83contigE-siliculosus-1a_M_contig83:50102..52072 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig83.16452.1mRNA_E-siliculosus-1a_M_contig83.16452.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig83 49240..52072 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig83.16452.1 ID=prot_E-siliculosus-1a_M_contig83.16452.1|Name=mRNA_E-siliculosus-1a_M_contig83.16452.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=172bp
MPEPRVPRFRVPAALVSPASLFLVGGIVYYFSLDKPSEDELNSNIGKEFP
DVVRGRHEVDDRMKEFFKRVNNNDPREEERMRDLLNKGKGSHYSAKRRHA
TTKDIEEFGFVSKPAGASSSQTAPAATTTTTMSPLAENKRPPGWGSKTIP
SQKPAVEEEGGAPRRRWWRFW*
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