prot_E-siliculosus-1a_M_contig82.16436.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig82.16436.1
Unique Name	prot_E-siliculosus-1a_M_contig82.16436.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	365

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig82.16436.1 vs. uniprot
Match: D7G294_ECTSI (18S rRNA aminocarboxypropyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G294_ECTSI)

HSP 1 Score: 469 bits (1208), Expect = 1.360e-163
Identity = 275/283 (97.17%), Postives = 278/283 (98.23%), Query Frame = 0

Query:    1 MERDRPLKGKGGGKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAQGDSWRRNGGAAREMIDRERDESGQLAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVRVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSRRDAVSMEDMMPPSYSDEEEYGDHGSEN 283
            MERDRPLKGK     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAQGDSWRRNGGAAREMIDRERDESG+LAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAV+VMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSRRDAVSMEDMMPPSYSDEEEYG+HGSEN
Sbjct:    1 MERDRPLKGK-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAQGDSWRRNGGAAREMIDRERDESGELAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSRRDAVSMEDMMPPSYSDEEEYGNHGSEN 278

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BLAST of mRNA_E-siliculosus-1a_M_contig82.16436.1 vs. uniprot
Match: A0A835YJ70_9STRA (18S rRNA aminocarboxypropyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ70_9STRA)

HSP 1 Score: 309 bits (792), Expect = 1.850e-100
Identity = 147/218 (67.43%), Postives = 178/218 (81.65%), Query Frame = 0

Query:   58 NGGAAREMIDRERDESGQLAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVRVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSRRDAVSMEDMMPPSYSDEEE 275
            +GG A E  D +   +   A+ + V LRMWDFEQCD K+CTGR+LCRLG ++EM+LGAPF GLVLSPNGE TVSP DRE+V+TLG+SVIDCSWARLD++PFHQMRRGHHRLLPFLVAANPVNYGKP KLTCAEA+AATL IVG +++   VMDQFGWG EFL++N DVL+ YAAC+ GAEV+ AQAA+LA+CE EA +RR     +DM+PP+Y   +E
Sbjct:   52 SGGRAAETADEQEGAAAAAAKGLGVRLRMWDFEQCDPKRCTGRRLCRLGFIKEMDLGAPFQGLVLSPNGEKTVSPEDREIVDTLGISVIDCSWARLDDVPFHQMRRGHHRLLPFLVAANPVNYGKPFKLTCAEALAATLVIVGLREQGALVMDQFGWGPEFLKINADVLDRYAACSSGAEVITAQAAYLAQCEAEAAARR---RPDDMLPPAYDSSDE 266

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BLAST of mRNA_E-siliculosus-1a_M_contig82.16436.1 vs. uniprot
Match: A0A8K1C8Q2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8Q2_PYTOL)

HSP 1 Score: 256 bits (653), Expect = 9.240e-79
Identity = 125/201 (62.19%), Postives = 156/201 (77.61%), Query Frame = 0

Query:   56 RRNGGAAREMIDRERDESGQLAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVRVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSR 256
            RR+G AA      E  E     +S  V+LRMWDF+QCD K+CTGRK+CRLG V+ M+ G PF G+VLSP GE  VSPAD E+V +LG+SVIDCSWA++ E+P+ Q+R G+HRLLPFLVAAN VNYG+P KLTCAEAIAATLYIVG +DEAV+V+++F WG EFL++N + LE YAAC   A+VV+AQ A+LA CEEE  +R
Sbjct:   32 RRDGAAAPRERGEEETEINFKRRSFPVTLRMWDFQQCDSKRCTGRKMCRLGYVKSMKPGQPFRGIVLSPAGEQAVSPADLEIVTSLGISVIDCSWAKVQELPYKQLRSGYHRLLPFLVAANSVNYGRPHKLTCAEAIAATLYIVGMKDEAVQVLEEFQWGMEFLKINFECLEAYAACETSADVVEAQNAYLAACEEELRAR 232

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BLAST of mRNA_E-siliculosus-1a_M_contig82.16436.1 vs. uniprot
Match: G4ZJA7_PHYSP (18S rRNA aminocarboxypropyltransferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJA7_PHYSP)

HSP 1 Score: 251 bits (642), Expect = 1.380e-77
Identity = 123/192 (64.06%), Postives = 151/192 (78.65%), Query Frame = 0

Query:   78 QSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVRVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSRRDAVSMEDMMPPS 269
            ++  V+LRMWDF+QCD K+CTGRKLCRLG ++ M+ GA F GLVLSP GE  VSPADR +VE  G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYG+P KL+CAEAIAATLYIVG +DEAV++MD+F WGAEFL++N D LE YAAC D A+VV AQ A+LA C+ E   R     ++ MM PS
Sbjct:   40 RAFPVTLRMWDFQQCDSKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGESIVSPADRGIVEGTGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKDEAVQLMDEFSWGAEFLKINADCLEAYAACEDSAQVVAAQEAYLAACQAENEQR-----LQRMMLPS 226

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BLAST of mRNA_E-siliculosus-1a_M_contig82.16436.1 vs. uniprot
Match: A0A2D4BYV1_PYTIN (18S rRNA aminocarboxypropyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYV1_PYTIN)

HSP 1 Score: 251 bits (642), Expect = 3.660e-77
Identity = 126/227 (55.51%), Postives = 165/227 (72.69%), Query Frame = 0

Query:   56 RRNGGAAREMIDRERDESGQ----LAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVRVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSRRDAVSMEDMMPPSYSDEEEYGD 278
            R++ G    ++ +ER+E         +S  ++LRMWDF+QCD K+CTGRKLCRL  V+ M+ G PF G+VLSP GE  +SPADRE+VETLG+SVIDCSWA++ E+P+ Q+R G+HRLLPF   AN VNYGKP KL+CAEAIAATLYIVG +DEAV++M++F WG EFL++N D LE YAAC + A+VV+AQ A+LA CEEE  +R     +  +      D EE G+
Sbjct:   26 RKSRGRDAPVVSQEREEGESEISFKRRSFPITLRMWDFQQCDSKRCTGRKLCRLAYVKSMKPGQPFRGIVLSPAGEQALSPADREIVETLGISVIDCSWAKVQELPYKQLRSGYHRLLPF--HANTVNYGKPYKLSCAEAIAATLYIVGMKDEAVQIMEEFSWGMEFLKINMDCLEAYAACENSAQVVEAQNAYLAACEEEHKARSRRFDLPSLDSDGEDDYEEEGE 250

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BLAST of mRNA_E-siliculosus-1a_M_contig82.16436.1 vs. uniprot
Match: A0A3M6VVZ0_9STRA (18S rRNA aminocarboxypropyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVZ0_9STRA)

HSP 1 Score: 248 bits (633), Expect = 9.160e-76
Identity = 118/194 (60.82%), Postives = 151/194 (77.84%), Query Frame = 0

Query:   69 ERDESGQLAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVRVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSRRDAVSM 262
            E  E+    ++  V+LRMWDF+QCD K+CTGRKLCRLG ++ M+ GA F GLVLSP GE  VS AD ++V + G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYG+P KL+CAEAIAATLYIVG QDEA++VMD+F WGAEFL++N D L+ YAAC + AEVV+AQ A+LA C+ E   R+  + +
Sbjct:   31 EESETNYRRRAFPVTLRMWDFQQCDAKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGEQAVSRADLDLVTSSGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLQDEAIQVMDEFSWGAEFLKINADCLQAYAACTNSAEVVEAQNAYLAACQTEQKERQQHMDL 224

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BLAST of mRNA_E-siliculosus-1a_M_contig82.16436.1 vs. uniprot
Match: K3WFG3_GLOUD (18S rRNA aminocarboxypropyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFG3_GLOUD)

HSP 1 Score: 247 bits (631), Expect = 3.220e-75
Identity = 124/206 (60.19%), Postives = 156/206 (75.73%), Query Frame = 0

Query:   69 ERDESGQLAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVRVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSRRDAVSMEDMMPPSYSDEE 274
            E  E+    +S  V+LRMWDF+QCD K+CTGRKLCR G V+ M+ GA F GLVLSP GE  VSPADRE+V ++G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYG+P KL+CAEAIAATL+IVG QDEA +VM++F WG EF+++N D LE YAAC +  EV+ AQ A+LA CE+E   +RD     D+ P   SD+E
Sbjct:   46 EESEANFKRRSFPVTLRMWDFQQCDSKRCTGRKLCRFGYVKSMKPGAHFRGLVLSPAGEQIVSPADREIVTSIGISVIDCSWAKVQELPYKQVRSGAHRLLPFLVAANSVNYGRPYKLSCAEAIAATLFIVGLQDEAFQVMEEFPWGMEFMKINMDCLEAYAACENSEEVIAAQNAYLAACEQE---QRDRAKRFDL-PSLESDDE 247

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BLAST of mRNA_E-siliculosus-1a_M_contig82.16436.1 vs. uniprot
Match: A0A329RNH6_9STRA (18S rRNA aminocarboxypropyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RNH6_9STRA)

HSP 1 Score: 242 bits (617), Expect = 6.470e-75
Identity = 118/206 (57.28%), Postives = 154/206 (74.76%), Query Frame = 0

Query:   69 ERDESGQLAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVRVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSRRDAVSMEDMMPPSYSDEE 274
            E  E     ++  V+LRMWDF+QCD K+CTGRKLCRLG ++ M+ GA F GLVLSP GE  VSP+DR +VE  G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYG+P KL+C+EAIAATLYIVG ++EAV++MD+F WG EFL++N D LE YAAC +  +VV+AQ A+LA C+ E   R   +++  +     S+EE
Sbjct:   26 EESEVNYRRRAFPVTLRMWDFQQCDSKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGEHIVSPSDRSIVEGTGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCSEAIAATLYIVGLKEEAVQLMDEFTWGPEFLKINADCLEAYAACENSEQVVEAQNAYLAACQTEHEQRLLRMNLPTVESDEESEEE 231

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BLAST of mRNA_E-siliculosus-1a_M_contig82.16436.1 vs. uniprot
Match: A0A3R7H3K7_9STRA (18S rRNA aminocarboxypropyltransferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H3K7_9STRA)

HSP 1 Score: 245 bits (626), Expect = 7.890e-75
Identity = 115/188 (61.17%), Postives = 149/188 (79.26%), Query Frame = 0

Query:   69 ERDESGQLAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVRVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSR 256
            E  E+    ++  V+LRMWDF+QCD K+CTGRKLCRLG ++ M+ GA F GLVLSP GE  VSPADR++VE +G+SVIDCSWA++ ++P+ Q+R G HRLLPFLVAAN VNYG+P KL+CAEAIAATLYIVG ++EA +VM++F WG EFL++N D LE Y+AC +  EVV+AQ A+LA C+ E + R
Sbjct:   31 EESETSYRRRAFPVTLRMWDFQQCDSKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGEQAVSPADRDIVEGIGISVIDCSWAKVQDLPYKQLRSGTHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGMKEEAKQVMEEFSWGEEFLKINADCLEAYSACENSTEVVEAQNAYLAACQTEHDQR 218

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BLAST of mRNA_E-siliculosus-1a_M_contig82.16436.1 vs. uniprot
Match: A0A6A3KBB7_9STRA (18S rRNA aminocarboxypropyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KBB7_9STRA)

HSP 1 Score: 245 bits (626), Expect = 1.110e-74
Identity = 119/191 (62.30%), Postives = 149/191 (78.01%), Query Frame = 0

Query:   78 QSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVRVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSRRDAVSMEDMMPP 268
            ++  V+LRMWDF+QCD K+CTGRKLCRLG ++ M+ GA F GLVLSP GE  VSPADR +V+  G+S IDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYG+P KL+CAEAIAATLYIVG +DEAV++MD+F WGAEFL++N D LE YAAC + AEVV+AQ A+L  C+ E   R     M+ M+ P
Sbjct:   40 RAFPVTLRMWDFQQCDSKRCTGRKLCRLGYIQSMKPGAHFRGLVLSPAGEQVVSPADRGIVQGSGISAIDCSWAKVQELPYKQVRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKDEAVQLMDEFSWGAEFLKINADCLEAYAACENSAEVVEAQTAYLTACQTEHEQR-----MQRMLLP 225

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig82.16436.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig82.16436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G294_ECTSI	1.360e-163	97.17	18S rRNA aminocarboxypropyltransferase n=2 Tax=Ect...	[more]
A0A835YJ70_9STRA	1.850e-100	67.43	18S rRNA aminocarboxypropyltransferase n=1 Tax=Tri...	[more]
A0A8K1C8Q2_PYTOL	9.240e-79	62.19	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
G4ZJA7_PHYSP	1.380e-77	64.06	18S rRNA aminocarboxypropyltransferase n=1 Tax=Phy...	[more]
A0A2D4BYV1_PYTIN	3.660e-77	55.51	18S rRNA aminocarboxypropyltransferase n=1 Tax=Pyt...	[more]
A0A3M6VVZ0_9STRA	9.160e-76	60.82	18S rRNA aminocarboxypropyltransferase n=2 Tax=Per...	[more]
K3WFG3_GLOUD	3.220e-75	60.19	18S rRNA aminocarboxypropyltransferase n=1 Tax=Glo...	[more]
A0A329RNH6_9STRA	6.470e-75	57.28	18S rRNA aminocarboxypropyltransferase n=2 Tax=Phy...	[more]
A0A3R7H3K7_9STRA	7.890e-75	61.17	18S rRNA aminocarboxypropyltransferase n=3 Tax=Phy...	[more]
A0A6A3KBB7_9STRA	1.110e-74	62.30	18S rRNA aminocarboxypropyltransferase n=2 Tax=Phy...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007209	RNase L inhibitor RLI, possible metal-binding domain	PFAM	PF04068	RLI	coord: 86..113 e-value: 2.7E-10 score: 39.9
IPR007177	Ribosome biogenesis protein, C-terminal	PFAM	PF04034	Ribo_biogen_C	coord: 120..246 e-value: 1.1E-51 score: 173.8
IPR022968	Ribosome biogenesis protein	PANTHER	PTHR20426	FAMILY NOT NAMED	coord: 39..327
IPR022968	Ribosome biogenesis protein	HAMAP	MF_01116	TSR3	coord: 82..247 score: 39.393
None	No IPR available	PRODOM	PD016638		coord: 102..246 e-value: 6.0E-45 score: 458.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig82	contig	E-siliculosus-1a_M_contig82:615985..621418 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig82.16436.1	mRNA_E-siliculosus-1a_M_contig82.16436.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig82 615671..621458 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig82.16436.1 ID=prot_E-siliculosus-1a_M_contig82.16436.1|Name=mRNA_E-siliculosus-1a_M_contig82.16436.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=365bp
MERDRPLKGKGGGKRVKGRGGGGGGGGGGRGRGGRPKSSQGRGHGHRHHA
QGDSWRRNGGAAREMIDRERDESGQLAQSITVSLRMWDFEQCDVKKCTGR
KLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSW
ARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVG
HQDEAVRVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCE
EEANSRRDAVSMEDMMPPSYSDEEEYGDHGSENGSENGSENGSSEGVTER
EIAEERAEEKESWTGGGDGGKRNGEPCPADEEEAVSDAASDSRGAAAAAA
AVADGGDAVEQEPR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022968	Rbsm_biogenesis
IPR007177	TDD_dom
IPR007209	RNaseL-inhib_metal-bd_dom