prot_E-siliculosus-1a_M_contig82.16428.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig82.16428.1
Unique Nameprot_E-siliculosus-1a_M_contig82.16428.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length271
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig82.16428.1 vs. uniprot
Match: A0A6H5JD07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD07_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 2.040e-62
Identity = 103/114 (90.35%), Postives = 108/114 (94.74%), Query Frame = 0
Query:   50 AYWGYWIVLFVTTIFTWIFAVAAAADDAWIEDFSKAGLGDSCDGYDFCGLYKAATAFQYLATIVISVVLVAVVVAAFMPAPTTGKLGLAVGIMLFVFALFELIAFCTYAAYIEE 163
            AYWGYWIVLFVTTIFTWIFAVAAAADDAWI D  +AGLG+SCDGYDFCGLYKAATAFQYLATIV+SVVLV VVVAAF PAP TGKLGLAVGIMLFVFA+FEL+AFCTYAAYIEE
Sbjct:    5 AYWGYWIVLFVTTIFTWIFAVAAAADDAWIADAYEAGLGESCDGYDFCGLYKAATAFQYLATIVVSVVLVMVVVAAFTPAPVTGKLGLAVGIMLFVFAVFELLAFCTYAAYIEE 118          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16428.1 vs. uniprot
Match: D7FWH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWH1_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 1.130e-32
Identity = 80/173 (46.24%), Postives = 103/173 (59.54%), Query Frame = 0
Query:   54 YWIVLFVTTIFTWIFAVAAAADDAWI--EDFSKAGLGDSCD-GYDFCGLYKAATAFQYLATIVISVVLVAVVVAAFMPAPTTGKLGLAVGIMLFVFALFELIAFCTYAAYIEEL--EDSSYYVSYYSGVYSVDYSPGPTLAVAVVAFIFGLVGAIVTCILRNKATTEQDGPFR 221
            YW V F T I TW+FAVAAA+DDAW+  E +    LG+ C+    FC  YK  TAFQ+ A IVIS  +V ++VAAF PAP TG+LG A G ML VF++ +L AF   AA    L  ++ +Y+              GPT+ VAV+A++FGL G     +LR  AT  QDGP R
Sbjct:   49 YWAVCFATAI-TWLFAVAAASDDAWLQFEGYPLLKLGERCEFSASFCDYYKTGTAFQFFAAIVISATVVVMIVAAFKPAPATGRLGAAAGTMLLVFSVLQLAAFSIMAASAGRLNRDNDNYF----------QIKAGPTIGVAVIAWVFGLAGGSAILLLRPHATPGQDGPLR 210          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16428.1 vs. uniprot
Match: A0A6H5KJK8_9PHAE (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJK8_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 6.330e-13
Identity = 61/171 (35.67%), Postives = 87/171 (50.88%), Query Frame = 0
Query:   66 WIFAVAAAADDAWIE-DFSKAGLGDS-----CDGYD-FCGLYKAATAFQYLATIVISVVLVAVVVAAFMPAP-----TTGKLGLAVGIMLFVFALFELIAFCTYAAYIEELEDSSYYVSYYSGVYSVDYSPGPTLAVAVVAFIFGLVGAIVTCILRNKATTEQDGPFRACM 224
            W+FAVAA+ADD W + D    G GD      CD  D  C LYKA TA Q++A +V+SV +V   +A F PA      +   L +A G ++  FA FE++AF       +EL+       + +G    +   G T  +AVVA + G+V A+        A +  DGPF  C+
Sbjct:   89 WVFAVAASADDKWAKIDGFDIGAGDEDILDDCDSSDDVCSLYKAFTAMQFIAAVVVSVSMVLFTLALFRPAAGLKCCSVKSLAIAAGSLMMAFAFFEMLAFVLIIVIEKELDGE-----FNTGFGFGEADLGATFGLAVVAVVLGVVQAVSVLTF---ARSSGDGPFFKCL 251          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JD07_9PHAE2.040e-6290.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWH1_ECTSI1.130e-3246.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJK8_9PHAE6.330e-1335.67WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 161..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..160
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..128
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 129..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 209..270
NoneNo IPR availableTMHMMTMhelixcoord: 139..161
NoneNo IPR availableTMHMMTMhelixcoord: 186..208
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 104..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig82contigE-siliculosus-1a_M_contig82:528167..536821 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig82.16428.1mRNA_E-siliculosus-1a_M_contig82.16428.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig82 526562..536862 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig82.16428.1 ID=prot_E-siliculosus-1a_M_contig82.16428.1|Name=mRNA_E-siliculosus-1a_M_contig82.16428.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=271bp
MVTMQPPPAYSGGEQAPPSYSGNQAPPSYGGNQAPPAYSGEGGKRQNPGA
YWGYWIVLFVTTIFTWIFAVAAAADDAWIEDFSKAGLGDSCDGYDFCGLY
KAATAFQYLATIVISVVLVAVVVAAFMPAPTTGKLGLAVGIMLFVFALFE
LIAFCTYAAYIEELEDSSYYVSYYSGVYSVDYSPGPTLAVAVVAFIFGLV
GAIVTCILRNKATTEQDGPFRACMPNAKAGGAPAAAPPAAAGVATARAVP
QPGAAPAGTKASQYPAVGTV*
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