prot_E-siliculosus-1a_M_contig82.16377.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig82.16377.1
Unique Nameprot_E-siliculosus-1a_M_contig82.16377.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length195
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig82.16377.1 vs. uniprot
Match: A0A6H5L014_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L014_9PHAE)

HSP 1 Score: 382 bits (982), Expect = 2.900e-134
Identity = 191/194 (98.45%), Postives = 191/194 (98.45%), Query Frame = 0
Query:    1 MKVSGVVCFMAAAGAANAFVAPSAARLGAVTRGESSLNMAVKKPSKKEEWVPVLKTSDIAPGELVGVTQDGQELLIAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGRLEPAKDLAVFPVRASGGNIQVLINRNLKQEFESKYWTGLLDAQGKASGDYY 194
            MKVSGVVCFMAAAGAANAFVAPSA RLGAVTRGESSLNMAVKKPSKKEEWV VLKTSDIAPGELVGVTQDGQELLIAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGRLEP KDLAVFPVRASGGNIQVLINRNLKQEFESKYWTGLLDAQGKASGDYY
Sbjct:    1 MKVSGVVCFMAAAGAANAFVAPSATRLGAVTRGESSLNMAVKKPSKKEEWVSVLKTSDIAPGELVGVTQDGQELLIAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGRLEPPKDLAVFPVRASGGNIQVLINRNLKQEFESKYWTGLLDAQGKASGDYY 194          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16377.1 vs. uniprot
Match: A0A836CB65_9STRA (Ferredoxin component n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB65_9STRA)

HSP 1 Score: 281 bits (718), Expect = 5.470e-94
Identity = 141/192 (73.44%), Postives = 158/192 (82.29%), Query Frame = 0
Query:    3 VSGVVCFMAAAGAANAFVAPSAARLGAVTRGESSLNMAVKKPSKKEEWVPVLKTSDIAPGELVGVTQDGQELLIAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGRLEPAKDLAVFPVRASGGNIQVLINRNLKQEFESKYWTGLLDAQGKASGDYY 194
            VS       AA  A AFVAP+  RL  V R  SS+ M  K P+K EEWV VL+TS+IAPGELV V  DG +LLIAADL GSIYATANICPHLGTPLDQGSINA GALVCPLHKSAFSLE G+LVGDWCPFPP+LGPLVLG+LEP K+LAVFPVRA G NI+VL+NRNLK +FE+KYW+G+LDAQGKA+GDYY
Sbjct:    8 VSTAAVVALAASGAEAFVAPAGGRLAGV-RSSSSMRMMAKVPAK-EEWVSVLQTSEIAPGELVPVETDGLQLLIAADLDGSIYATANICPHLGTPLDQGSINAQGALVCPLHKSAFSLETGELVGDWCPFPPILGPLVLGKLEPPKNLAVFPVRAKGSNIEVLVNRNLKADFETKYWSGILDAQGKATGDYY 197          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16377.1 vs. uniprot
Match: A0A6V1TRG8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TRG8_HETAK)

HSP 1 Score: 255 bits (651), Expect = 7.510e-84
Identity = 128/189 (67.72%), Postives = 146/189 (77.25%), Query Frame = 0
Query:    6 VVCFMAAAGAANAFVAPSAARLGAVTRGESSLNMAVKKPSKKEEWVPVLKTSDIAPGELVGVTQDGQELLIAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGRLEPAKDLAVFPVRASGGNIQVLINRNLKQEFESKYWTGLLDAQGKASGDYY 194
            VVC +A  G A AFV  S     +  +  SSL M + K   KEEWVPVLKT +IAPGELV V  DG +LLI AD  GSIYA+ANICPHLGTPLDQGS+   G +VCPLHKSAFSLE G+L GDWCPFPP+LGPLVLG+LEP K+LAV PVRA G +I+VL+NRNLK  FESKYW GLLDA+GKA+GDYY
Sbjct:    7 VVCVIALIGLAKAFVPASNGLARSAVKSTSSLQM-MAKVGAKEEWVPVLKTDEIAPGELVPVETDGLQLLIIADFDGSIYASANICPHLGTPLDQGSLGD-GTIVCPLHKSAFSLETGELAGDWCPFPPILGPLVLGKLEPPKNLAVVPVRAKGNSIEVLVNRNLKSMFESKYWAGLLDAKGKATGDYY 193          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16377.1 vs. uniprot
Match: A0A7S2V0A4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0A4_9STRA)

HSP 1 Score: 249 bits (635), Expect = 2.180e-81
Identity = 130/196 (66.33%), Postives = 148/196 (75.51%), Query Frame = 0
Query:    1 MKVSGVVCFMAAAGAANAFV-APSAARLGAVTRGESSLNMA-VKKPSKKEEWVPVLKTSDIAPGELVGVTQDGQELLIAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGRLEPAKDLAVFPVRASGGNIQVLINRNLKQEFESKYWTGLLDAQGKASGDYY 194
            MK   VV    AAG  NAF+ AP  A   AV    S L M  V     KEEW+PVLK S+IA GELV V QDG +LL+ AD  GSIY TANICPHLGTP+DQGS+   G +VCPLHKSAFSLE G+L GDWCPFPP+LGPLVLG+LEPAK+LA F VRA G +I+VL+NRNLKQ+FESKYW G+LDAQGKA+GDYY
Sbjct:    2 MKTFVVVLLCIAAGV-NAFLPAPGMAGSSAVRATSSQLKMGGVPFAPTKEEWIPVLKKSEIAAGELVPVEQDGLQLLVIADFDGSIYCTANICPHLGTPMDQGSLGD-GTIVCPLHKSAFSLETGELAGDWCPFPPLLGPLVLGKLEPAKNLATFAVRAKGDSIEVLVNRNLKQQFESKYWAGILDAQGKATGDYY 195          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16377.1 vs. uniprot
Match: A0A6U4IM54_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4IM54_9STRA)

HSP 1 Score: 238 bits (607), Expect = 5.880e-77
Identity = 122/197 (61.93%), Postives = 149/197 (75.63%), Query Frame = 0
Query:    1 MKVSGVVCFMAAAGAANAFVA---PSAARLGAVTRGESSLNMAVKKPSKKEEWVPVLKTSDIAPGELVGVTQDGQELLIAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGRLEPAKDLAVFPVRASGGNIQVLINRNLKQEFESKYWTGLLDAQGKASGDYY 194
            M +  V+  + AA  + AFVA   PSAAR    TR  S+LNM     +K E WV VLKTS+I  GELV V  DG  LLIAAD  G+IY  AN+CPHLGTPLDQG++ A G +VCPLHK+AFSL+ G++VGDWCPFPP+LGP+VLG+LEPAK++A FPVR+SG NIQV +N+N + EFES YW G+LDAQGKA+GDYY
Sbjct:   16 MMMKFVLAALLAAVPSMAFVAKAGPSAAR---ATRASSALNMMAGARAKME-WVTVLKTSNIGKGELVPVETDGMNLLIAADTNGAIYCLANVCPHLGTPLDQGTV-ANGVIVCPLHKTAFSLKSGEVVGDWCPFPPILGPMVLGKLEPAKNVATFPVRSSGSNIQVQVNKNARAEFESGYWAGILDAQGKATGDYY 207          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16377.1 vs. uniprot
Match: A0A6U4JWG8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JWG8_9STRA)

HSP 1 Score: 235 bits (600), Expect = 9.160e-76
Identity = 114/173 (65.90%), Postives = 137/173 (79.19%), Query Frame = 0
Query:   22 PSAARLGAVTRGESSLNMAVKKPSKKEEWVPVLKTSDIAPGELVGVTQDGQELLIAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGRLEPAKDLAVFPVRASGGNIQVLINRNLKQEFESKYWTGLLDAQGKASGDYY 194
            PSAAR    TR  S+LNM     +K E WV VLKTS+I  GELV V  DG  LLIAAD  G+IY  AN+CPHLGTPLDQG++ A G +VCPLHK+AFSL+ G++VGDWCPFPP+LGP+VLG+LEPAK++A FPVR+SG NIQV +N+N + EFES YW G+LDAQGKA+GDYY
Sbjct:   49 PSAAR---ATRASSALNMMAGARAKME-WVTVLKTSNIGKGELVPVETDGMNLLIAADTNGAIYCLANVCPHLGTPLDQGTV-ANGVIVCPLHKTAFSLKSGEVVGDWCPFPPILGPMVLGKLEPAKNVATFPVRSSGSNIQVQVNKNARAEFESGYWAGILDAQGKATGDYY 216          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16377.1 vs. uniprot
Match: A0A4D9CV78_9STRA (Rieske domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV78_9STRA)

HSP 1 Score: 229 bits (585), Expect = 9.020e-74
Identity = 114/197 (57.87%), Postives = 144/197 (73.10%), Query Frame = 0
Query:    1 MKVSGVVCFMAAAGAANA-FVAPSAARLGAVTRGESSLN--MAVKKPSKKEEWVPVLKTSDIAPGELVGVTQDGQELLIAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGRLEPAKDLAVFPVRASGGNIQVLINRNLKQEFESKYWTGLLDAQGKASGDYY 194
            MKV+ ++  + A   A   F A    R+  V  G+ + +  + VK    K+EWV +LK +DIAPG+++ V   G +LL+ AD  GS+Y  ANICPHLGTPLDQGS+   G +VCPLHKSAFSLE G+LVGDWCPFPPVLGPLVLG+L+P +DLAVF VR+ G +I+ L+N NLK +FESKYW GLLDAQGKA+GDYY
Sbjct:    1 MKVAAILLALCATTQAFVPFAAKPTPRVAPVAAGKQNPDGSIRVKGVKAKDEWVSLLKATDIAPGDIIPVESKGLQLLLVADYDGSVYCVANICPHLGTPLDQGSLGD-GTIVCPLHKSAFSLETGELVGDWCPFPPVLGPLVLGKLQPPRDLAVFQVRSRGSDIEALVNVNLKADFESKYWAGLLDAQGKATGDYY 196          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16377.1 vs. uniprot
Match: A0A7S0XBI6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XBI6_9STRA)

HSP 1 Score: 224 bits (570), Expect = 1.460e-71
Identity = 101/166 (60.84%), Postives = 127/166 (76.51%), Query Frame = 0
Query:   29 AVTRGESSLNMAVKKPSKKEEWVPVLKTSDIAPGELVGVTQDGQELLIAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGRLEPAKDLAVFPVRASGGNIQVLINRNLKQEFESKYWTGLLDAQGKASGDYY 194
            A++ G  +  + +K  SKKEEWVPVLK+SDIA G+LV V  DG  +LI ADL G I+A  N CPHLGTPL+ G +     +VCPLHKSAFSLE G +VGDWCPFPP+LGPLVLG+L P + +  FPVRA G  ++V ++R+LK+ FESKYW+GLLDAQGKA+G+YY
Sbjct:   26 AISSGRLNSQLQMKVISKKEEWVPVLKSSDIAAGDLVPVEVDGVAILIVADLDGKIFAIGNSCPHLGTPLENGRLGEGSTIVCPLHKSAFSLESGDVVGDWCPFPPILGPLVLGKLAPPEKVVTFPVRAKGQTVEVFVDRSLKERFESKYWSGLLDAQGKATGEYY 191          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16377.1 vs. uniprot
Match: A0A0G4ER02_VITBC (Rieske domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ER02_VITBC)

HSP 1 Score: 185 bits (470), Expect = 5.770e-56
Identity = 84/152 (55.26%), Postives = 109/152 (71.71%), Query Frame = 0
Query:   43 KPSKKEEWVPVLKTSDIAPGELVGVTQDGQELLIAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGRLEPAKDLAVFPVRASGGNIQVLINRNLKQEFESKYWTGLLDAQGKASGDYY 194
            K +  +EW  VL   +IA G+LV V  +G  LL+ AD  GSIY  AN+CPH+GTPL+QG +   G ++CPLH++AFSLE G++VG+WCPFPP++GPL  G+L P ++LA FPVR  G  I+VL++ N K  FE  YW GLLDAQGKA G YY
Sbjct:   73 KTTTAQEWKAVLNDDEIAAGDLVPVQVNGLNLLLVADTDGSIYCVANVCPHIGTPLEQGEVKD-GKVICPLHRTAFSLEKGEVVGEWCPFPPLVGPLT-GKLRPPQNLATFPVRQRGRTIEVLVDSNTKANFEKNYWKGLLDAQGKADGSYY 222          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16377.1 vs. uniprot
Match: A0A0G4F0C4_VITBC (Rieske domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F0C4_VITBC)

HSP 1 Score: 185 bits (469), Expect = 8.180e-56
Identity = 84/147 (57.14%), Postives = 107/147 (72.79%), Query Frame = 0
Query:   48 EEWVPVLKTSDIAPGELVGVTQDGQELLIAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGRLEPAKDLAVFPVRASGGNIQVLINRNLKQEFESKYWTGLLDAQGKASGDYY 194
            +EW  VL   +IA G+LV V  +G  LL+ AD  GSIY  AN+CPH+GTPL+QG +   G +VCPLH++AFSLE G++VGDWCPFPP++GPL  G+L P ++LA FPVR  G  I+VL++ + K  FE  YW GLLDAQGKA G YY
Sbjct:   78 QEWKAVLNDDEIAAGDLVPVQVNGLNLLLVADADGSIYCVANVCPHIGTPLEQGEVKD-GKVVCPLHRTAFSLESGEVVGDWCPFPPLVGPLT-GKLRPPQNLATFPVRQRGRTIEVLVDSSAKANFEKNYWKGLLDAQGKADGSYY 222          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16377.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L014_9PHAE2.900e-13498.45Rieske domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A836CB65_9STRA5.470e-9473.44Ferredoxin component n=2 Tax=Tribonema minus TaxID... [more]
A0A6V1TRG8_HETAK7.510e-8467.72Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V0A4_9STRA2.180e-8166.33Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U4IM54_9STRA5.880e-7761.93Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U4JWG8_9STRA9.160e-7665.90Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A4D9CV78_9STRA9.020e-7457.87Rieske domain-containing protein n=2 Tax=Monodopsi... [more]
A0A7S0XBI6_9STRA1.460e-7160.84Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A0G4ER02_VITBC5.770e-5655.26Rieske domain-containing protein n=1 Tax=Vitrella ... [more]
A0A0G4F0C4_VITBC8.180e-5657.14Rieske domain-containing protein n=1 Tax=Vitrella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 49..128
e-value: 7.0E-18
score: 64.4
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 51..164
score: 25.2
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 46..175
e-value: 2.3E-21
score: 77.7
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 48..169
NoneNo IPR availablePANTHERPTHR21496FERREDOXIN-RELATEDcoord: 28..171
NoneNo IPR availablePANTHERPTHR21496:SF22coord: 28..171
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..194
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.501

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig82contigE-siliculosus-1a_M_contig82:147356..155521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig82.16377.1mRNA_E-siliculosus-1a_M_contig82.16377.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig82 146053..155537 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig82.16377.1 ID=prot_E-siliculosus-1a_M_contig82.16377.1|Name=mRNA_E-siliculosus-1a_M_contig82.16377.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=195bp
MKVSGVVCFMAAAGAANAFVAPSAARLGAVTRGESSLNMAVKKPSKKEEW
VPVLKTSDIAPGELVGVTQDGQELLIAADLKGSIYATANICPHLGTPLDQ
GSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGRLEPAKDL
AVFPVRASGGNIQVLINRNLKQEFESKYWTGLLDAQGKASGDYY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036922Rieske_2Fe-2S_sf
IPR017941Rieske_2Fe-2S