prot_E-siliculosus-1a_M_contig82.16368.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig82.16368.1
Unique Nameprot_E-siliculosus-1a_M_contig82.16368.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length305
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Match: D8LQ57_ECTSI (DUF1990 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ57_ECTSI)

HSP 1 Score: 536 bits (1382), Expect = 1.140e-191
Identity = 284/304 (93.42%), Postives = 288/304 (94.74%), Query Frame = 0
Query:    1 MGIFMRICVLSFLLAEVISSGTTFTFVREPSASFVRRYLERQETEQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERTVRQEQYPRARLGSGKETYARGREALLRWQMHEGSSWARICLGRRPSRPALQRNLVTIAKACAGLVWCMNPCQVLYERNDVALRFIAPPGAGANRSLGDGEARRVENTERVMGGGGGALWAGTRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVVNSSSGLP 304
            MGIFMRI VLSFLLAEVISSGTTFTF REPSAS VRRYLERQ+TEQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERTVR      A LGSGKETYARGREALLRWQMHEGSSWARI LG+RP RPALQRNLVTIAKACAGLVWC+NPCQVLYERNDVALRFIAPPGA ANRSL DGEAR VENT+RVMGGGGGALWAG RPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVVNSSSGLP
Sbjct:    1 MGIFMRISVLSFLLAEVISSGTTFTFFREPSASVVRRYLERQDTEQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERTVR------AHLGSGKETYARGREALLRWQMHEGSSWARIFLGQRPPRPALQRNLVTIAKACAGLVWCINPCQVLYERNDVALRFIAPPGADANRSLDDGEARPVENTKRVMGGGGGALWAGKRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVVNSSSGLP 298          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Match: A0A6H5L025_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L025_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 4.080e-31
Identity = 76/80 (95.00%), Postives = 77/80 (96.25%), Query Frame = 0
Query:    1 MGIFMRICVLSFLLAEVISSGTTFTFVREPSASFVRRYLERQETEQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERT 80
            MGIFMRI VLSFLLAEVISSGTTFTF REPSASFVRRYLERQ+T QSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERT
Sbjct:    1 MGIFMRITVLSFLLAEVISSGTTFTFFREPSASFVRRYLERQDTGQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERT 80          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Match: A0A2P6VI37_9CHLO (DUF1990 domain-containing protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VI37_9CHLO)

HSP 1 Score: 80.9 bits (198), Expect = 4.810e-14
Identity = 64/219 (29.22%), Postives = 95/219 (43.38%), Query Frame = 0
Query:   88 RARLGSGKETYARGREALLRWQMHEGSSWARICLGRRPSRPALQRNLVTIAKACAGLVWCMNPCQVLYE-----RNDVALRFIAPPGAGANRSL----GDGEARRVENTERVMGGGGGALWAGTRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVL--HFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKR 295
            R +LG G+  Y + +  L RW  H    WA +      ++  ++     +  A     W  NP ++ Y      R      +  PP   A  S       G AR   +     GGGG A WA  +  S+ + A+ LP    +GR+ A A+ T  GH IQGEER  V   H      DDSVW+E+Y++SR    +     P ++  Q +F  +    M+R
Sbjct:   60 RVKLGQGRAAYRKAQRLLQRWH-HFDLGWASV------NKAEMREGAPVVVTAKTLFAWSCNPLRISYVEERGLRGGQRPPWAPPPPPRAKGSTQLHTSCGGARESPSQGLARGGGGRAEWAAAQERSSGA-AAHLP----RGRRYAFAHTTLAGHQIQGEERFAVAWNHE-----DDSVWYEIYTLSRPGNWLTTATHPLLRLFQHKFAADSMAAMQR 261          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Match: E1Z534_CHLVA (DUF1990 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z534_CHLVA)

HSP 1 Score: 76.3 bits (186), Expect = 2.400e-12
Identity = 59/219 (26.94%), Postives = 96/219 (43.84%), Query Frame = 0
Query:   88 RARLGSGKETYARGREALLRWQMHEGSSWARICLGRRPSRPALQRNLVTIAKACAGLVWCMNPCQVLYERNDVALRFIA--PPGAGANRSLGDGEARRVENTERVMGGGGGALWA-GT------RPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVV 297
            R ++G G+  Y R R  L +W+ H    WA +      + P ++     +  A +   W  NP ++ +       R     PP  GA  +  +G + R +   R+ GGG G L   GT                    +  +GR+ A A+ T  GH I+GEER  V        DDSVW+E+Y++SR    +     P +++ QR+F  +  + M+R +
Sbjct:   71 RVQVGRGQAAYRRARSLLEQWR-HFDLGWASV------NAPPVKPGSPVVVTAFSLCCWSCNPLRISFVEEGGLRRNAQQLPPWVGAPPTAAEGASLRQQ---RLHGGGSGVLGLLGTGXXXXXXXXXXXXXXXXXXXLPPRGRRFAFAHTTLQGHQIRGEERFCVAWNAQ---DDSVWYEIYTLSRPGSWITAAAHPLLRAFQRKFAADSCDAMQRQM 276          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Match: A0A1Y1IBR7_KLENI (DUF1990 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IBR7_KLENI)

HSP 1 Score: 73.6 bits (179), Expect = 1.600e-11
Identity = 56/207 (27.05%), Postives = 86/207 (41.55%), Query Frame = 0
Query:   91 LGSGKETYARGREALLRWQMHEGSSWARICLGRRPSRPALQRNLVTIAKACAGLVWCMNPCQVLYERNDVALRFIAPPGAGANRSLGDGEARRVENTERVMGGGGGALWAGTRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVV 297
            +GSG+  + R ++A+  W+ H    WA +     P  P  +R  V +     GLVW +NP Q+LY  +         P   + R     E+   E        GG    A   P +         GV  K R  A  + T  GHL+ GEER  V        DDSVW+++ + SR    +    +P  +  QR+F ++    ++  V
Sbjct:   65 IGSGEAAFQRAKKAVRDWR-HFQLGWATV----DPDTPIRERERVAVVARSFGLVWTLNPLQILYVDDGTD-----SPSTSSTRE----ESSTNEKRNGGSRSGGRKARAKVGPGAVEREEGLSGGVSTKAR-FAYGHGTLKGHLLSGEERFLVEWR----DDDSVWYDILAFSRPGHFLAAATYPAARFYQRQFAKQSMRAVQAAV 252          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Match: A0A2P6TVM3_CHLSO (Uncharacterized protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TVM3_CHLSO)

HSP 1 Score: 62.8 bits (151), Expect = 1.260e-7
Identity = 63/253 (24.90%), Postives = 98/253 (38.74%), Query Frame = 0
Query:   88 RARLGSGKETYARGREALLRWQMHEGSSWARICLGRRPSRPALQRNLVTIAKACAGLVWCMNPCQVLYERNDVALRFIAPPGAGANRSLGDGEARRVENTERVMGGGG---------------------------------------GALW--AGTRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVL--HFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVV 297
            R +LG G+  Y + +  L +W+ H    WA +      + P +++    +  A   L W  NP ++ +            P AGANRS G G     +N +   G G                                        G L   AG+R       A+ +   +  GR+ A A+ T  GH I GEER  V   H      DDSVW+E+Y++SR    +     P +++ QR+F  +    M+R +
Sbjct:   60 RVQLGRGQAAYRKAQRLLQQWR-HFDLGWASV------NAPPVKQGAPVVVTARTLLCWSCNPLRISFVEEGALRPGQLQPWAGANRS-GAG----AKNGKSSKGSGXXXXXXXXXXXXRKNGNVAXXXXXXXXXXXXXXDPLARLLGVLTRGAGSRAXXXXXXAAVVRAPR--GRRYAFAHTTLAGHQISGEERFAVAWNHE-----DDSVWYEIYTLSRPGSWITAATHPLLRAFQRKFAADSMAAMQREM 293          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Match: A0A8J9WMC4_9CHLO (Probable UPF0548 protein At2g17695 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WMC4_9CHLO)

HSP 1 Score: 55.1 bits (131), Expect = 2.700e-5
Identity = 35/97 (36.08%), Postives = 50/97 (51.55%), Query Frame = 0
Query:  204 PTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVVNSS 300
            P +A   AS  P    KG +      T  GH + GEER  V  +C    DDSVW+E+Y+VSR A ++    +P  +  QRRF +E    +   V++S
Sbjct:  128 PATALLKASRQPACTRKGMRYDFRQTTLEGHSLAGEERFSV-QWCKE--DDSVWYEIYAVSRPATILALASYPLTRYYQRRFRQESIAAVCDAVDTS 221          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LQ57_ECTSI1.140e-19193.42DUF1990 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5L025_9PHAE4.080e-3195.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P6VI37_9CHLO4.810e-1429.22DUF1990 domain-containing protein n=1 Tax=Micracti... [more]
E1Z534_CHLVA2.400e-1226.94DUF1990 domain-containing protein n=1 Tax=Chlorell... [more]
A0A1Y1IBR7_KLENI1.600e-1127.05DUF1990 domain-containing protein n=1 Tax=Klebsorm... [more]
A0A2P6TVM3_CHLSO1.260e-724.90Uncharacterized protein n=1 Tax=Chlorella sorokini... [more]
A0A8J9WMC4_9CHLO2.700e-536.08Probable UPF0548 protein At2g17695 n=1 Tax=Coccomy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018960Domain of unknown function DUF1990PFAMPF09348DUF1990coord: 88..289
e-value: 1.4E-17
score: 64.1
NoneNo IPR availablePANTHERPTHR34202FAMILY NOT NAMEDcoord: 233..301
coord: 88..155
NoneNo IPR availablePANTHERPTHR34202:SF1UPF0548 PROTEINcoord: 233..301
coord: 88..155
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..304
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.773

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig82contigE-siliculosus-1a_M_contig82:77407..79949 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig82.16368.1mRNA_E-siliculosus-1a_M_contig82.16368.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig82 77179..80560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig82.16368.1 ID=prot_E-siliculosus-1a_M_contig82.16368.1|Name=mRNA_E-siliculosus-1a_M_contig82.16368.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=305bp
MGIFMRICVLSFLLAEVISSGTTFTFVREPSASFVRRYLERQETEQSPVN
HAFAGFSDIAAAGGDAAVPPPPPQGFQERTVRQEQYPRARLGSGKETYAR
GREALLRWQMHEGSSWARICLGRRPSRPALQRNLVTIAKACAGLVWCMNP
CQVLYERNDVALRFIAPPGAGANRSLGDGEARRVENTERVMGGGGGALWA
GTRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGP
GGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVVNSS
SGLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018960DUF1990