mRNA_E-siliculosus-1a_M_contig82.16368.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig82.16368.1
Unique NamemRNA_E-siliculosus-1a_M_contig82.16368.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Match: D8LQ57_ECTSI (DUF1990 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ57_ECTSI)

HSP 1 Score: 538 bits (1385), Expect = 1.450e-187
Identity = 284/304 (93.42%), Postives = 288/304 (94.74%), Query Frame = 1 
Query:  229 MGIFMRICVLSFLLAEVISSGTTFTFVREPSASFVRRYLERQETEQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERTVRQEQYPRARLGSGKETYARGREALLRWQMHEGSSWARICLGRRPSRPALQRNLVTIAKACAGLVWCMNPCQVLYERNDVALRFIAPPGAGANRSLGDGEARRVENTERVMGGGGGALWAGTRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVVNSSSGLP 1140
            MGIFMRI VLSFLLAEVISSGTTFTF REPSAS VRRYLERQ+TEQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERTVR      A LGSGKETYARGREALLRWQMHEGSSWARI LG+RP RPALQRNLVTIAKACAGLVWC+NPCQVLYERNDVALRFIAPPGA ANRSL DGEAR VENT+RVMGGGGGALWAG RPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVVNSSSGLP
Sbjct:    1 MGIFMRISVLSFLLAEVISSGTTFTFFREPSASVVRRYLERQDTEQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERTVR------AHLGSGKETYARGREALLRWQMHEGSSWARIFLGQRPPRPALQRNLVTIAKACAGLVWCINPCQVLYERNDVALRFIAPPGADANRSLDDGEARPVENTKRVMGGGGGALWAGKRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVVNSSSGLP 298
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Match: A0A6H5L025_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L025_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 8.410e-30
Identity = 76/80 (95.00%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:  229 MGIFMRICVLSFLLAEVISSGTTFTFVREPSASFVRRYLERQETEQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERT 468
            MGIFMRI VLSFLLAEVISSGTTFTF REPSASFVRRYLERQ+T QSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERT
Sbjct:    1 MGIFMRITVLSFLLAEVISSGTTFTFFREPSASFVRRYLERQDTGQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERT 80
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Match: A0A2P6VI37_9CHLO (DUF1990 domain-containing protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VI37_9CHLO)

HSP 1 Score: 80.9 bits (198), Expect = 2.870e-13
Identity = 64/219 (29.22%), Postives = 95/219 (43.38%), Query Frame = 1 
Query:  490 RARLGSGKETYARGREALLRWQMHEGSSWARICLGRRPSRPALQRNLVTIAKACAGLVWCMNPCQVLYE-----RNDVALRFIAPPGAGANRSL----GDGEARRVENTERVMGGGGGALWAGTRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVL--HFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKR 1113
            R +LG G+  Y + +  L RW  H    WA +      ++  ++     +  A     W  NP ++ Y      R      +  PP   A  S       G AR   +     GGGG A WA  +  S+ + A+ LP    +GR+ A A+ T  GH IQGEER  V   H      DDSVW+E+Y++SR    +     P ++  Q +F  +    M+R
Sbjct:   60 RVKLGQGRAAYRKAQRLLQRWH-HFDLGWASV------NKAEMREGAPVVVTAKTLFAWSCNPLRISYVEERGLRGGQRPPWAPPPPPRAKGSTQLHTSCGGARESPSQGLARGGGGRAEWAAAQERSSGA-AAHLP----RGRRYAFAHTTLAGHQIQGEERFAVAWNHE-----DDSVWYEIYTLSRPGNWLTTATHPLLRLFQHKFAADSMAAMQR 261
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Match: E1Z534_CHLVA (DUF1990 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z534_CHLVA)

HSP 1 Score: 76.3 bits (186), Expect = 1.210e-11
Identity = 59/219 (26.94%), Postives = 96/219 (43.84%), Query Frame = 1 
Query:  490 RARLGSGKETYARGREALLRWQMHEGSSWARICLGRRPSRPALQRNLVTIAKACAGLVWCMNPCQVLYERNDVALRFIA--PPGAGANRSLGDGEARRVENTERVMGGGGGALWA-GT------RPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVV 1119
            R ++G G+  Y R R  L +W+ H    WA +      + P ++     +  A +   W  NP ++ +       R     PP  GA  +  +G + R +   R+ GGG G L   GT                    +  +GR+ A A+ T  GH I+GEER  V        DDSVW+E+Y++SR    +     P +++ QR+F  +  + M+R +
Sbjct:   71 RVQVGRGQAAYRRARSLLEQWR-HFDLGWASV------NAPPVKPGSPVVVTAFSLCCWSCNPLRISFVEEGGLRRNAQQLPPWVGAPPTAAEGASLRQQ---RLHGGGSGVLGLLGTGXXXXXXXXXXXXXXXXXXXLPPRGRRFAFAHTTLQGHQIRGEERFCVAWNAQ---DDSVWYEIYTLSRPGSWITAAAHPLLRAFQRKFAADSCDAMQRQM 276
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Match: A0A8J9WMC4_9CHLO (Probable UPF0548 protein At2g17695 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WMC4_9CHLO)

HSP 1 Score: 74.7 bits (182), Expect = 1.570e-11
Identity = 66/261 (25.29%), Postives = 101/261 (38.70%), Query Frame = 1 
Query:  352 QETEQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERTVRQEQYPRARLGSGKETYARGREALLRWQMHEGSSWARICLGRRPSRPALQ--RNLVTIAKACAGLVWCMNPCQVLYERNDVALRFIAPPGAGANRSLGDGEARRVENTERVMGGGGGALWAGTRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVVNSS 1128
            QE E++  NH   G +D  +                        Y R ++G GK  Y   RE +  WQ H G  W         +RP ++   +++ +A+   GL+W  NP +++Y R + A                                          P +A   AS  P    KG +      T  GH + GEER  V  +C    DDSVW+E+Y+VSR A ++    +P  +  QRRF +E    +   V++S
Sbjct:   26 QEAERANANHKVQGITDFMSGSHLKGWNTD--------------YDRVQVGKGKRAYTAAREFVKTWQ-HMGLGWVDT------NRPEVKVGEHVIVMAQVL-GLLWMCNPLRIVYAREEKAYM----------------------------------------PATALLKASRQPACTRKGMRYDFRQTTLEGHSLAGEERFSV-QWCKE--DDSVWYEIYAVSRPATILALASYPLTRYYQRRFRQESIAAVCDAVDTS 221
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Match: A0A1Y1IBR7_KLENI (DUF1990 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IBR7_KLENI)

HSP 1 Score: 73.6 bits (179), Expect = 7.060e-11
Identity = 56/207 (27.05%), Postives = 86/207 (41.55%), Query Frame = 1 
Query:  499 LGSGKETYARGREALLRWQMHEGSSWARICLGRRPSRPALQRNLVTIAKACAGLVWCMNPCQVLYERNDVALRFIAPPGAGANRSLGDGEARRVENTERVMGGGGGALWAGTRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVV 1119
            +GSG+  + R ++A+  W+ H    WA +     P  P  +R  V +     GLVW +NP Q+LY  +         P   + R     E+   E        GG    A   P +         GV  K R  A  + T  GHL+ GEER  V        DDSVW+++ + SR    +    +P  +  QR+F ++    ++  V
Sbjct:   65 IGSGEAAFQRAKKAVRDWR-HFQLGWATV----DPDTPIRERERVAVVARSFGLVWTLNPLQILYVDDGTD-----SPSTSSTRE----ESSTNEKRNGGSRSGGRKARAKVGPGAVEREEGLSGGVSTKAR-FAYGHGTLKGHLLSGEERFLVEWR----DDDSVWYDILAFSRPGHFLAAATYPAARFYQRQFAKQSMRAVQAAV 252
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Match: I0YZW6_COCSC (DUF1990 domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZW6_COCSC)

HSP 1 Score: 70.9 bits (172), Expect = 3.080e-10
Identity = 55/217 (25.35%), Postives = 90/217 (41.47%), Query Frame = 1 
Query:  475 QEQYPRARLGSGKETYARGREALLRWQMHEGSSWARICLGRRPSRPALQ--RNLVTIAKACAGLVWCMNPCQVLYERNDVALRFIAPPGAGANRSLGDGEARRVENTERVMGGGGGALWAGTRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVV 1119
            Q  Y R ++G GK+ Y + ++ +  WQ H G  W         +RPA++   +++ +A+   GL+W  NP ++LY + +                                         G  P +A   A   P    +G +  +   T  GH + GEER  V        DDSVW+E+Y++SR A L+    +P  +  Q+RF RE    ++R  
Sbjct:   50 QSDYDRVQVGKGKQAYRKAKDFVSEWQ-HMGLGWVDT------NRPAVKVGEHVIVMAQVL-GLLWMCNPLRILYAKEE----------------------------------------KGLIPAAAMLRARRQPACTSRGLRFDLGQTTLEGHSLAGEERFSVQW---SKEDDSVWYEIYAISRPATLLALASYPLTRYYQQRFRRESMAAVQRAA 215
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Match: A0A2P6TVM3_CHLSO (Uncharacterized protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TVM3_CHLSO)

HSP 1 Score: 62.8 bits (151), Expect = 4.470e-7
Identity = 63/253 (24.90%), Postives = 98/253 (38.74%), Query Frame = 1 
Query:  490 RARLGSGKETYARGREALLRWQMHEGSSWARICLGRRPSRPALQRNLVTIAKACAGLVWCMNPCQVLYERNDVALRFIAPPGAGANRSLGDGEARRVENTERVMGGGG---------------------------------------GALW--AGTRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVL--HFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVV 1119
            R +LG G+  Y + +  L +W+ H    WA +      + P +++    +  A   L W  NP ++ +            P AGANRS G G     +N +   G G                                        G L   AG+R       A+ +   +  GR+ A A+ T  GH I GEER  V   H      DDSVW+E+Y++SR    +     P +++ QR+F  +    M+R +
Sbjct:   60 RVQLGRGQAAYRKAQRLLQQWR-HFDLGWASV------NAPPVKQGAPVVVTARTLLCWSCNPLRISFVEEGALRPGQLQPWAGANRS-GAG----AKNGKSSKGSGXXXXXXXXXXXXRKNGNVAXXXXXXXXXXXXXXDPLARLLGVLTRGAGSRAXXXXXXAAVVRAPR--GRRYAFAHTTLAGHQISGEERFAVAWNHE-----DDSVWYEIYTLSRPGSWITAATHPLLRAFQRKFAADSMAAMQREM 293
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Match: UPI00197F1056 (DUF1990 family protein n=1 Tax=Paludisphaera soli TaxID=2712865 RepID=UPI00197F1056)

HSP 1 Score: 55.1 bits (131), Expect = 4.890e-5
Identity = 55/212 (25.94%), Postives = 83/212 (39.15%), Query Frame = 1 
Query:  484 YPRARLGSGKETYARGREALLRWQMHEGSSWARICLGRRPSRPALQRNLVTIAKACAGLVWCMNPCQVLYERNDVALRFIAPPGAGANRSLGDGEARRVENTERVMGGGGGALWAGTRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVV 1119
            + R R+GSG+ET+A+ R AL RW       WA +       RP     +V I     GL W +N C+++Y  ++        PGA A R                                                  AVA+ T   H+  GEER +V         D+VW++V S S+   L+  L +P+++  QR F R+ A  M + +
Sbjct:   33 HTRLRIGSGRETFAKARAALSRWDQFR-IGWAEVQPHDAEVRPGA---VVAIVARRLGL-WWLNACRIVYVVDE------DEPGATAARY-------------------------------------------------AVAFGTLPDHVGSGEERFQVEW---DAETDAVWYDVASFSQPHLLLTRLGYPYMKWSQRLFSRQSAAAMLKAM 181
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LQ57_ECTSI1.450e-18793.42DUF1990 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5L025_9PHAE8.410e-3095.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P6VI37_9CHLO2.870e-1329.22DUF1990 domain-containing protein n=1 Tax=Micracti... [more]
E1Z534_CHLVA1.210e-1126.94DUF1990 domain-containing protein n=1 Tax=Chlorell... [more]
A0A8J9WMC4_9CHLO1.570e-1125.29Probable UPF0548 protein At2g17695 n=1 Tax=Coccomy... [more]
A0A1Y1IBR7_KLENI7.060e-1127.05DUF1990 domain-containing protein n=1 Tax=Klebsorm... [more]
I0YZW6_COCSC3.080e-1025.35DUF1990 domain-containing protein n=1 Tax=Coccomyx... [more]
A0A2P6TVM3_CHLSO4.470e-724.90Uncharacterized protein n=1 Tax=Chlorella sorokini... [more]
UPI00197F10564.890e-525.94DUF1990 family protein n=1 Tax=Paludisphaera soli ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig82contigE-siliculosus-1a_M_contig82:77179..80560 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size915
Model size1754
Exons5
Ec32 orthologEc-26_006060.1
Ec32 ortholog descriptionDomain of unknown function DUF1990
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2E8GY@1,2SEZ2@2759
EggNOG free text desc.Domain of unknown function (DUF1990)
Seed eggNOG ortholog2880.D8LQ57
Seed ortholog evalue7.7e-150
Seed ortholog score536.6
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936248.4952042-UTR-E-siliculosus-1a_M_contig82:77178..774061622936248.4952042-UTR-E-siliculosus-1a_M_contig82:77178..77406Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig82 77179..77406 +
1696250990.6230423-UTR-E-siliculosus-1a_M_contig82:77178..774061696250990.6230423-UTR-E-siliculosus-1a_M_contig82:77178..77406Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig82 77179..77406 +
1622936248.5875347-UTR-E-siliculosus-1a_M_contig82:79949..805601622936248.5875347-UTR-E-siliculosus-1a_M_contig82:79949..80560Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig82 79950..80560 +
1696250990.6951175-UTR-E-siliculosus-1a_M_contig82:79949..805601696250990.6951175-UTR-E-siliculosus-1a_M_contig82:79949..80560Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig82 79950..80560 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936248.5181868-CDS-E-siliculosus-1a_M_contig82:77406..774741622936248.5181868-CDS-E-siliculosus-1a_M_contig82:77406..77474Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 77407..77474 +
1696250990.6348455-CDS-E-siliculosus-1a_M_contig82:77406..774741696250990.6348455-CDS-E-siliculosus-1a_M_contig82:77406..77474Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 77407..77474 +
1622936248.532632-CDS-E-siliculosus-1a_M_contig82:78023..782141622936248.532632-CDS-E-siliculosus-1a_M_contig82:78023..78214Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 78024..78214 +
1696250990.6453905-CDS-E-siliculosus-1a_M_contig82:78023..782141696250990.6453905-CDS-E-siliculosus-1a_M_contig82:78023..78214Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 78024..78214 +
1622936248.5445504-CDS-E-siliculosus-1a_M_contig82:78391..785251622936248.5445504-CDS-E-siliculosus-1a_M_contig82:78391..78525Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 78392..78525 +
1696250990.656116-CDS-E-siliculosus-1a_M_contig82:78391..785251696250990.656116-CDS-E-siliculosus-1a_M_contig82:78391..78525Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 78392..78525 +
1622936248.5580688-CDS-E-siliculosus-1a_M_contig82:78959..792771622936248.5580688-CDS-E-siliculosus-1a_M_contig82:78959..79277Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 78960..79277 +
1696250990.6669657-CDS-E-siliculosus-1a_M_contig82:78959..792771696250990.6669657-CDS-E-siliculosus-1a_M_contig82:78959..79277Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 78960..79277 +
1622936248.5729582-CDS-E-siliculosus-1a_M_contig82:79745..799491622936248.5729582-CDS-E-siliculosus-1a_M_contig82:79745..79949Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 79746..79949 +
1696250990.6780336-CDS-E-siliculosus-1a_M_contig82:79745..799491696250990.6780336-CDS-E-siliculosus-1a_M_contig82:79745..79949Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 79746..79949 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig82.16368.1prot_E-siliculosus-1a_M_contig82.16368.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig82 77407..79949 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig82.16368.1

>prot_E-siliculosus-1a_M_contig82.16368.1 ID=prot_E-siliculosus-1a_M_contig82.16368.1|Name=mRNA_E-siliculosus-1a_M_contig82.16368.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=305bp
MGIFMRICVLSFLLAEVISSGTTFTFVREPSASFVRRYLERQETEQSPVN
HAFAGFSDIAAAGGDAAVPPPPPQGFQERTVRQEQYPRARLGSGKETYAR
GREALLRWQMHEGSSWARICLGRRPSRPALQRNLVTIAKACAGLVWCMNP
CQVLYERNDVALRFIAPPGAGANRSLGDGEARRVENTERVMGGGGGALWA
GTRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGP
GGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVVNSS
SGLP*
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mRNA from alignment at E-siliculosus-1a_M_contig82:77179..80560+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig82.16368.1 ID=mRNA_E-siliculosus-1a_M_contig82.16368.1|Name=mRNA_E-siliculosus-1a_M_contig82.16368.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3382bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig82:77179..80560+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GCTTGCCATCACGTCTTGCGTGTCCTGTGGTCGAGTATCGAGTGGTCGAA
AACCCCGTGCTGTGCTGTGACTGCACATCTGACAGTCTCGCGGCGAGACT
GTAAGCCAGACACCGCACCGGCACGCCCCTCAACCCACCGACAATCCTCG
CTCCCAGCAGTACATGGCAGGGGAGGCAAAGAAGAACAACAAACGAAGAC
AACAACAAACCTCGTCGTGCCGTACGCCATGGGCATTTTCATGAGGATTT
GTGTTCTATCCTTCCTCCTGGCCGAGGTGATCTCGTCAGGTACCACGTGA
GCCCTCTTCTTCAAGTAAAATTTGGTAGTACATGCAGACTTTCAGACGAC
GCGGAGCAGGCCGAAGAAAGCATTGTAGTGTTGTAGTGCCCAGATGGCAA
AGTAACCAACACCCGCCACCGTAGAATAGTAAATACGGGTCTTTCGATTG
GTCAAGGTCGTGATGTCAAAGCCTGGCGTGACACCTTCAGACAGCTCTTT
GGATGATTCAAACGCGCCGATCGCACGAAAGGTGGGTCCTTCGAGCGAAG
GTGGCAGAAAACATGATTACAGTAGTGCAGTAGTCATCCAAGCTCTACCG
ACGCACTCTTCTTCGTTTTGCTGGCACAACTGCTGTACTGCAGCAGAACT
TTTTGTAGCGTTGTAGCAGAGAAGGGAAATCAGGTCTGCCTCGAGTCAGC
AAACATGTAGACATTGTACAGCAATAGTGTGTGGGCCATGTTGTGCCACA
AACGCAGCTCAGGCAGTTTCTTCATTTGCTGGTTCACAATACAGTCGTAA
ACGCCGATTCCCCTGCTGCCAATGATGTATGTATGTGGAGCGCAGGTTCA
CCTTCGTTAGGGAGCCTAGCGCCTCGTTTGTGAGGCGGTATTTGGAGCGA
CAGGAGACAGAGCAGAGCCCGGTCAATCATGCGTTTGCAGGGTTTTCCGA
CATTGCAGCCGCCGGTGGCGATGCCGCGGTCCCTCCTCCGCCGCCACAAG
GATTCCAAGAGAGAACAGTAAGGCAAGAACAATATCGTGGTACAGCAGTA
TTCCCAACCTGCCAACTCGAAGTCTCTTAATTGTGACGGTTTCCGCCTGC
TTCCAGCGAATCTCGGCGCTTTTCTTATTTTTACCGGTTTTCGTTTGCCC
GTTGCGGGCGGCTCTTGGCTTCCGGTTAACAACCCGATCGGCGCACGCGT
GTTCTTCTACAAGCCAGGGCGCGCCTTGGGAGCGGCAAGGAGACATATGC
GCGAGGCCGGGAAGCACTTCTGCGGTGGCAGATGCACGAAGGATCTTCGT
GGGCGAGAATATGTCTCGGGCGGAGGCCTTCACGACCCGCCTTGCAGGTA
TGCGGCCTCGCCTGTGTACGGCACCACCTCTCTCTTGCGTGTGGTTTGTA
GTATTGACTTTGGTCTTGTCTGTTGGCGGCCACAGAAGTGCGGCCGTTGT
TTCGACTCTTGCCTGTTCGGCTTGATGGACTGACGCTATTTTCCGGTAAT
ATACTCGGCGAGTGTACAAGGCCAAAGCTCCCTTTTTCCTTCTTTCGTAT
GCGTTGCTCGCCGAGCGAATCAACGAAAACAAGGAGTATCGCCAGATCAA
GCCCAGAAGTCGCAACAGCACTTGTGCATCCCACCCCCCATTCGCCCACA
GCCATGTCGCCCCGTTTCTCTGCTACACTATTGTACGTCCACACAGAACG
CGACGGCAGCGTGTACGTAGCACCTCCTGACAGCCGCGTGCTTCACTCCC
CTCCCCTCCCTCTGCCCGGCCCCTTCTGCAGCGCAACCTGGTGACAATCG
CCAAGGCGTGCGCCGGGCTAGTCTGGTGCATGAATCCATGCCAAGTCCTC
TACGAACGGAACGATGTAGCTCTCCGGTTTATTGCACCACCCGGGGCAGG
CGCAAACAGATCTCTTGGCGACGGAGAAGCGCGTCGAGTAGAAAACACAG
AGCGCGTGATGGGGGGTGGCGGGGGGGCGCTTTGGGCGGGTACACGACCC
ACCTCTGCTCCGAGTTGGGCTTCGTTCTTGCCGGGCGTGAAACACAAGGG
GCGGCAATCGGCTGTGGCGTATGCGACAAAAATGGGGCACCTCATTCAGG
TACGGATTCGCTGCCGTGCTTGTTGGATGGTTTATGTCTCATGTAGTTCC
CGCTCTCCTTGCAATATAAAAGCTGGGGAGTCACGTTGAGCTGGGCACAT
GCGGTTGTGTCGCCTCTGATTGGGCGCGGAATCAGCGACCTAGTCAAGGG
TGTACTGAAACTGTGTCCTCGTGTTACCATGGGCTGCCCCAAGGGTCGCG
TTGAGGGCGACACTAGCGGAAGAAGAAATGAATGCTCCATGTTTGCTGTC
ATTTTTGGCCGGAGCTAGCGCACCAACCAGGACTTTGTTTGGGCCCAAAC
GAACCCGGTGACCACGCTGGTGTTATCCTGCACACGCACCCCTTGCACGT
TAGAATGCATACGTACGTATCGTGTTCTCCTCCTCTTTGCGCGCGCGGTT
GCTGTGACAACTATCTACTATTTATTGCAAATATGTGCGCCGGTTTTCTC
TTGGCTTTTTCTCACAGGGGGAAGAAAGGATGCGCGTACTTCATTTCTGC
GGTCCAGGGGGCGATGATTCGGTGTGGTTCGAGGTCTATTCGGTGTCCCG
AGGAGCCGGTCTCGTGGGAGGGCTTGTTTTCCCCTTTGTTCAGTCGATGC
AAAGGAGATTTTTCCGGGAGCAGGCCGAAACAATGAAGCGCGTTGTCAAT
TCTTCATCTGGCCTCCCCTAGCACATGTATGTAGCAGATGGTCAAGGCAC
AGGAGGGAAGTTATCGAGCCTTAATATCCCAACATGCTCTTGTTGGAGTT
TACTATAAGTACGGCAGTTGAGGAGCGTCGTCATCATCTACTCTCGCAGA
CAACAGCCGTTGGGCGCCATTTCATAATATGCCAACTGTTGGGCGATTTC
CGCTAGAGAAGAGGGCTGTTTGTTCCGTGTAGTTGAACGACCTGTAGTGG
AACGGCAACGTCGTGCGAACATGTCCTGGATGTTCGTTGCTTTAGAACGA
AATCGATAGAATAAAATGCTGAGCGTACGACGAACGCCAGGTGCCACCAA
CCGGCGCAAGCGCCGGCTCTTACGTATCATTGATTTGCAGAGTCCGTTGC
TGCTATGGACTGAACAATACATTCTGCGTTCATATCATGTTTACTTCGTT
TTGCGTCTGGAAGGATTCCTTATTGTCTAGCAGTCGAGAAAACCCACACA
TGTATGTGTTTCATTTTTGAGAAGAGAGACAGCTTTGCACCTGTTTGCTT
GGGGGCGGGGGGGGGGACTCGTTGCTTCAGAGTCGTGTGGTTGTCGACTA
CAACAGCAGCAGCAGACTAATATTATGTTGCT
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig82:77179..80560+

>mRNA_E-siliculosus-1a_M_contig82.16368.1 ID=mRNA_E-siliculosus-1a_M_contig82.16368.1|Name=mRNA_E-siliculosus-1a_M_contig82.16368.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1830bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig82:77179..80560+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGGCATTTTCATGAGGATTTGTGTTCTATCCTTCCTCCTGGCCGAGGT
GATCTCGTCAGGTACCACATGGGCATTTTCATGAGGATTTGTGTTCTATC
CTTCCTCCTGGCCGAGGTGATCTCGTCAGGTACCACGTTCACCTTCGTTA
GGGAGCCTAGCGCCTCGTTTGTGAGGCGGTATTTGGAGCGACAGGAGACA
GAGCAGAGCCCGGTCAATCATGCGTTTGCAGGGTTTTCCGACATTGCAGC
CGCCGGTGGCGATGCCGCGGTCCCTCCTCCGCCGCCACAAGGATTCCAAG
AGAGAACAGTAAGGCAAGAACAATATCGTTCACCTTCGTTAGGGAGCCTA
GCGCCTCGTTTGTGAGGCGGTATTTGGAGCGACAGGAGACAGAGCAGAGC
CCGGTCAATCATGCGTTTGCAGGGTTTTCCGACATTGCAGCCGCCGGTGG
CGATGCCGCGGTCCCTCCTCCGCCGCCACAAGGATTCCAAGAGAGAACAG
TAAGGCAAGAACAATATCCCAGGGCGCGCCTTGGGAGCGGCAAGGAGACA
TATGCGCGAGGCCGGGAAGCACTTCTGCGGTGGCAGATGCACGAAGGATC
TTCGTGGGCGAGAATATGTCTCGGGCGGAGGCCTTCACGACCCGCCTTGC
AGCCAGGGCGCGCCTTGGGAGCGGCAAGGAGACATATGCGCGAGGCCGGG
AAGCACTTCTGCGGTGGCAGATGCACGAAGGATCTTCGTGGGCGAGAATA
TGTCTCGGGCGGAGGCCTTCACGACCCGCCTTGCAGCGCAACCTGGTGAC
AATCGCCAAGGCGTGCGCCGGGCTAGTCTGGTGCATGAATCCATGCCAAG
TCCTCTACGAACGGAACGATGTAGCTCTCCGGTTTATTGCACCACCCGGG
GCAGGCGCAAACAGATCTCTTGGCGACGGAGAAGCGCGTCGAGTAGAAAA
CACAGAGCGCGTGATGGGGGGTGGCGGGGGGGCGCTTTGGGCGGGTACAC
GACCCACCTCTGCTCCGAGTTGGGCTTCGTTCTTGCCGGGCGTGAAACAC
AAGGGGCGGCAATCGGCTGTGGCGTATGCGACAAAAATGGGGCACCTCAT
TCAGCGCAACCTGGTGACAATCGCCAAGGCGTGCGCCGGGCTAGTCTGGT
GCATGAATCCATGCCAAGTCCTCTACGAACGGAACGATGTAGCTCTCCGG
TTTATTGCACCACCCGGGGCAGGCGCAAACAGATCTCTTGGCGACGGAGA
AGCGCGTCGAGTAGAAAACACAGAGCGCGTGATGGGGGGTGGCGGGGGGG
CGCTTTGGGCGGGTACACGACCCACCTCTGCTCCGAGTTGGGCTTCGTTC
TTGCCGGGCGTGAAACACAAGGGGCGGCAATCGGCTGTGGCGTATGCGAC
AAAAATGGGGCACCTCATTCAGGGGGAAGAAAGGATGCGCGTACTTCATT
TCTGCGGTCCAGGGGGCGATGATTCGGTGTGGTTCGAGGTCTATTCGGTG
TCCCGAGGAGCCGGTCTCGTGGGAGGGCTTGTTTTCCCCTTTGTTCAGTC
GATGCAAAGGAGATTTTTCCGGGAGCAGGCCGAAACAATGAAGCGCGTTG
TCAATTCTTCATCTGGCCTCCCCTAGGGGGAAGAAAGGATGCGCGTACTT
CATTTCTGCGGTCCAGGGGGCGATGATTCGGTGTGGTTCGAGGTCTATTC
GGTGTCCCGAGGAGCCGGTCTCGTGGGAGGGCTTGTTTTCCCCTTTGTTC
AGTCGATGCAAAGGAGATTTTTCCGGGAGCAGGCCGAAACAATGAAGCGC
GTTGTCAATTCTTCATCTGGCCTCCCCTAG
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