prot_E-siliculosus-1a_M_contig80.16256.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig80.16256.1
Unique Nameprot_E-siliculosus-1a_M_contig80.16256.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length280
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig80.16256.1 vs. uniprot
Match: A0A6H5JQ82_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQ82_9PHAE)

HSP 1 Score: 506 bits (1303), Expect = 2.290e-180
Identity = 271/279 (97.13%), Postives = 274/279 (98.21%), Query Frame = 0 
Query:    1 MGPPPFVASDDPCAGADRAGGTEPPCNVSVSMYVREVVSGVCAVFEEAPAVGLVCKTLLSLERLVFTAKGNRKELAVLLELCDVVTRGALNQWAMASADVPGVSEGAAALRRHVEGAKRVAAMCNKGKIARFALGRKISRSIVSVKTNVVNFATVHNLSLSAGLHVKLANMEKELAAKERERQQALDAAAKKASADAALGSQYRVVGLVKRLGSSASERALSVLDWCDYQRQSSSSMVKACGKRFRSGRPELYLMGGVLLATAAAAACGQHGLLKRRPS 279
            M PPPFVASDDPCAGADRAGGTEPP NVSVSMYVRE+VSG CAVFEEAPAVGLVCKTLLSLERLVFTAKGNRKELAVLLELCDVVTRGALNQW MASAD PGVSEGAAALRRHVEGAKRVAAMCNKGKIARFALGRKISRSIVSVKTNVVNFATVHNLSLSAGLHVKLA+MEKELAAKERERQQALDAAAKKASADAALGSQYRVVGLVKRLGSSASERALSVLDWCD+QRQSSSSMVKACGKRFRSGRPELYLMGGVLLATAAAAACGQHGLLKRRPS
Sbjct:    1 MEPPPFVASDDPCAGADRAGGTEPPRNVSVSMYVREIVSGACAVFEEAPAVGLVCKTLLSLERLVFTAKGNRKELAVLLELCDVVTRGALNQWVMASADGPGVSEGAAALRRHVEGAKRVAAMCNKGKIARFALGRKISRSIVSVKTNVVNFATVHNLSLSAGLHVKLADMEKELAAKERERQQALDAAAKKASADAALGSQYRVVGLVKRLGSSASERALSVLDWCDFQRQSSSSMVKACGKRFRSGRPELYLMGGVLLATAAAAACGQHGLLKRRPS 279
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig80.16256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JQ82_9PHAE2.290e-18097.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 161..188
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 274..279
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..251
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 252..273
NoneNo IPR availableTMHMMTMhelixcoord: 252..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig80contigE-siliculosus-1a_M_contig80:381210..383778 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig80.16256.1mRNA_E-siliculosus-1a_M_contig80.16256.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig80 380316..384015 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig80.16256.1 ID=prot_E-siliculosus-1a_M_contig80.16256.1|Name=mRNA_E-siliculosus-1a_M_contig80.16256.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=280bp
MGPPPFVASDDPCAGADRAGGTEPPCNVSVSMYVREVVSGVCAVFEEAPA
VGLVCKTLLSLERLVFTAKGNRKELAVLLELCDVVTRGALNQWAMASADV
PGVSEGAAALRRHVEGAKRVAAMCNKGKIARFALGRKISRSIVSVKTNVV
NFATVHNLSLSAGLHVKLANMEKELAAKERERQQALDAAAKKASADAALG
SQYRVVGLVKRLGSSASERALSVLDWCDYQRQSSSSMVKACGKRFRSGRP
ELYLMGGVLLATAAAAACGQHGLLKRRPS*
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