prot_E-siliculosus-1a_M_contig80.16249.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig80.16249.1
Unique Nameprot_E-siliculosus-1a_M_contig80.16249.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length47
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig80.16249.1 vs. uniprot
Match: D7FP66_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP66_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 7.240e-23
Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = 0 
Query:    1 MSPPLSSTRSRSGTGCFFTDEFEGNVRHKSARQQCLSISDLDMALL 46
            MSPPLSSTRSRSGTGCFFTDEFE + RHKSARQQCLSISDLDMALL
Sbjct:    1 MSPPLSSTRSRSGTGCFFTDEFEASARHKSARQQCLSISDLDMALL 46
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig80.16249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FP66_ECTSI7.240e-2393.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig80contigE-siliculosus-1a_M_contig80:328803..329645 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig80.16249.1mRNA_E-siliculosus-1a_M_contig80.16249.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig80 326454..329856 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig80.16249.1 ID=prot_E-siliculosus-1a_M_contig80.16249.1|Name=mRNA_E-siliculosus-1a_M_contig80.16249.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=47bp
MSPPLSSTRSRSGTGCFFTDEFEGNVRHKSARQQCLSISDLDMALL*
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