prot_E-siliculosus-1a_M_contig80.16247.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig80.16247.1
Unique Nameprot_E-siliculosus-1a_M_contig80.16247.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length255
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig80.16247.1 vs. uniprot
Match: D7FP65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP65_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 2.090e-108
Identity = 217/255 (85.10%), Postives = 219/255 (85.88%), Query Frame = 0 
Query:    1 MTFTAVSIVMSTFLASPRVEALVPSFAGPGRGVSMVSALIPSQGRAANSIPSTAAGGTPMGPARVFDGSRGHPKRSPTGTXXXXXXXXDAEDARREQHHYPASAVYFTDDDH-LATPSQLPGSPYDQRDLSAGPPEPGGGGVDHRHRAQQLESSQRSGALPAAYHRPWRQRARDARRQTVFENNPEEGFGAEDGXXXXXXXXXXXXXXXXXXXXXXXXDSQQKAINRAALPIVDLVGLVSPLVLIAGMTMVHVVP 254
            MTFTAVSIVMST LASPRVEALVPSFAGPGRGVSMVSALIPSQGRAANSIPST A GTP GPARVFDGSRGHPKRSPTGT  XXXXXX                         LA PSQLPGS YDQRDLSAGPPEPGGG VDHRHRAQQLESSQRSGALPAAYHRPWRQRARDARRQTVFENNPEEGFGAE+GXXXXXXXXXXXXXXXXXXXXXX  DSQQKAINRAALPIVDLVGLVSPLVLIAGMTMVH+VP
Sbjct:    1 MTFTAVSIVMSTLLASPRVEALVPSFAGPGRGVSMVSALIPSQGRAANSIPSTTAAGTPTGPARVFDGSRGHPKRSPTGTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAKPSQLPGSLYDQRDLSAGPPEPGGG-VDHRHRAQQLESSQRSGALPAAYHRPWRQRARDARRQTVFENNPEEGFGAEEGXXXXXXXXXXXXXXXXXXXXXXRRDSQQKAINRAALPIVDLVGLVSPLVLIAGMTMVHIVP 254
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BLAST of mRNA_E-siliculosus-1a_M_contig80.16247.1 vs. uniprot
Match: A0A6H5JSQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSQ5_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 1.790e-106
Identity = 203/254 (79.92%), Postives = 211/254 (83.07%), Query Frame = 0 
Query:    1 MTFTAVSIVMSTFLASPRVEALVPSFAGPGRGVSMVSALIPSQGRAANSIPSTAAGGTPMGPARVFDGSRGHPKRSPTGTXXXXXXXXDAEDARREQHHYPASAVYFTDDDHLATPSQLPGSPYDQRDLSAGPPEPGGGGVDHRHRAQQLESSQRSGALPAAYHRPWRQRARDARRQTVFENNPEEGFGAEDGXXXXXXXXXXXXXXXXXXXXXXXXDSQQKAINRAALPIVDLVGLVSPLVLIAGMTMVHVVP 254
            MTFTAVSI+MST LASPRVEALVPSF G  RG +MVSALIP  GRAANSIPST AGGTP GPARVF GS G+PK SPTGT        DA+DA RE+ H P SAV+F D D  A PSQLPGSPY+QRDL AGPPEPGGG VD RHRAQQL SSQRSGALPAAYHRPWRQRARDARRQTVFENNPEE F AE  XXXXXXXXXXXXXXXXXX      DSQQKAINRAALPIVDLVGLVSPLVLIAGMTMVH+VP
Sbjct:    1 MTFTAVSIMMSTLLASPRVEALVPSFGG--RGFNMVSALIPPHGRAANSIPSTTAGGTPTGPARVFVGSDGNPKLSPTGTAAAAPPSGDADDAHRERQHNPTSAVFFDDVDGHAEPSQLPGSPYEQRDLPAGPPEPGGG-VDQRHRAQQLVSSQRSGALPAAYHRPWRQRARDARRQTVFENNPEERFEAEXXXXXXXXXXXXXXXXXXXXLVASRKDSQQKAINRAALPIVDLVGLVSPLVLIAGMTMVHIVP 251
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig80.16247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP65_ECTSI2.090e-10885.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSQ5_9PHAE1.790e-10679.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..226
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 254..254
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 227..253
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.5
NoneNo IPR availableTMHMMTMhelixcoord: 231..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig80contigE-siliculosus-1a_M_contig80:322181..323747 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig80.16247.1mRNA_E-siliculosus-1a_M_contig80.16247.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig80 320914..325154 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig80.16247.1 ID=prot_E-siliculosus-1a_M_contig80.16247.1|Name=mRNA_E-siliculosus-1a_M_contig80.16247.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=255bp
MTFTAVSIVMSTFLASPRVEALVPSFAGPGRGVSMVSALIPSQGRAANSI
PSTAAGGTPMGPARVFDGSRGHPKRSPTGTAAAAPPSGDAEDARREQHHY
PASAVYFTDDDHLATPSQLPGSPYDQRDLSAGPPEPGGGGVDHRHRAQQL
ESSQRSGALPAAYHRPWRQRARDARRQTVFENNPEEGFGAEDGGGGSLVG
ARRRRASEKEEVVASRRDSQQKAINRAALPIVDLVGLVSPLVLIAGMTMV
HVVP*
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