prot_E-siliculosus-1a_M_contig80.16231.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig80.16231.1
Unique Name	prot_E-siliculosus-1a_M_contig80.16231.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	945

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig80.16231.1 vs. uniprot
Match: A0A6H5J997_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J997_9PHAE)

HSP 1 Score: 1017 bits (2629), Expect = 0.000e+0
Identity = 694/953 (72.82%), Postives = 717/953 (75.24%), Query Frame = 0

Query:    1 MSGVYRKWDCQRRNPVDTTWKTTPKNKEMDEDLTKRVVPGASKGQVAFQARGLDLNSNKASTRAKPRGRRKAXXXXXXXXXXXXXXXXXXXWEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYERKYGTEAEXXXXXXXXXXXXXXAMAERESLQRDEEKQLMEVIKASLVESLGAGEKDDRAVIAALEASKRDSENDAREEGEDPDVLKVMAESRRQHEAMQELRRVHGDMSSVRPQFQSAAETATTAVSFAGDQANRHPPLTQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVPMAPDWLVSELPVPAPAGTGGFVQAPRQGYQGQAYSAGIDQVHTASPPTPHPXXXXXXXXXXXXXXX--VYAPHATGGGGGVHMETTHPGLEPTMAQHAYSVQQQQQ----QPMRIPSRFDDGNVGVPPXXXXXXXXXXPPSPSVQGPPALLXXXXXXXX--TLDHGAKATQGALAGRQPASSQXXXXXXXXXXXXXXXXXX-PXXXXXXXXXXXXXXXXXXXXXXXKRDGLVAAGGAAQLAGWAVRGSATCGAPGGAGLLPPAPPVQKTAWGAAGQASDGLSAEERELEAVLEASRIAEETRQREDAESKIAMDMALKMSMMETSATPSGGERYGHGRGKYYQQPAATTGYPAQPPPLSAPAAANGFRPNGGGWQGQXXXXXPAPNASYTPMAXXXXXXXXXXXXXGAPTAVSPRAPGAYSAAGRPLSPRQQGAPSQVVPTRPPPADGSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELAWVLEQSRLEAEIQKSRMAIAEEGEEEMMXXXXXXXXXXQEKRNAEQLEFQRAMQASLGS 944
            MSGVYRKWDCQRRNPVDTTWKTTPKNKE+DEDLTKRVVPGAS+GQVAFQARGLDLNSNKAS  AKPRGRR  XXXXXXXXXXXXXXXXX  WEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYE+KYGTEAE              AMAE ESLQRDEEKQLMEVIKASLVESLGAGEKDDR VIAALEASKRDSE +AREEGED DVLKVM ESRRQHEAMQELRRVHGDMSSV P  QSAAETATTAVS+AGDQ N        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVPMAPDWLVSELPV APAG  GF+QAPRQGYQGQAYSAG++Q HTA+PPT   XXXXXXXXXXXXXXX  VYAPHATG  GGVHMETTHPGLEPT +QHAYSVQ+QQ     QPMRIP+RFDDGN+ +PPXXX       P SPSVQGP    XXXXXXXX  TLDH A+AT  ALAGRQPASSQ                   P               XXXXXXXX           AQLAGWAVRGSATCGAPGG G+LPPAPPV+K AWGAAGQASDGLSAEERELEAVLEASRI EETR+RE+AESKIAMDMALKMSMME SA PSGGERYGH RG YYQQPAATTGYP QPPPLS  AAANGFRPN GG Q Q XXX PAPNASY+PMA              AP AV                 RQQGAPSQV+PTRPPPA+GSVG                                                            DELAWVLEQSRLEAEIQ SRM IAE+GEEEMM          QEKRNAEQLEFQRAMQASLGS
Sbjct:  875 MSGVYRKWDCQRRNPVDTTWKTTPKNKEVDEDLTKRVVPGASRGQVAFQARGLDLNSNKASALAKPRGRRHGXXXXXXXXXXXXXXXXX--WEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAEREKRREAHAKARVKAMAECESLQRDEEKQLMEVIKASLVESLGAGEKDDRDVIAALEASKRDSEYNAREEGEDADVLKVMVESRRQHEAMQELRRVHGDMSSVPPHSQSAAETATTAVSYAGDQTNHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVPMAPDWLVSELPVAAPAGAAGFMQAPRQGYQGQAYSAGMNQGHTATPPTXXXXXXXXXXXXXXXXXXXAVYAPHATGDCGGVHMETTHPGLEPTNSQHAYSVQEQQXXXXXQPMRIPARFDDGNLAMPPXXXATAPVGVPTSPSVQGPXXXXXXXXXXXXXXTLDHRAEATPCALAGRQPASSQQTILCHGTTPLLTAQQQPWPQGSGAELSGYMMMNGXXXXXXXXXXXXXXXXXXXAQLAGWAVRGSATCGAPGGGGVLPPAPPVRKAAWGAAGQASDGLSAEERELEAVLEASRIEEETRRREEAESKIAMDMALKMSMMEASAAPSGGERYGHDRGNYYQQPAATTGYPTQPPPLSVLAAANGFRPNEGGRQRQQXXXHPAPNASYSPMAASASAAAPPPV---APMAVXXXXXXXXXXXXXXXXXRQQGAPSQVLPTRPPPANGSVGDGGGESAEGDREEDEAARELRIALEEEEQYYEAKDAAGRTGGPSPPSKAGASTGRGGQQEDELAWVLEQSRLEAEIQVSRMVIAEKGEEEMMDKVLEESRLEQEKRNAEQLEFQRAMQASLGS 1822

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BLAST of mRNA_E-siliculosus-1a_M_contig80.16231.1 vs. uniprot
Match: D7FRG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG7_ECTSI)

HSP 1 Score: 634 bits (1635), Expect = 7.840e-215
Identity = 568/916 (62.01%), Postives = 574/916 (62.66%), Query Frame = 0

Query:   29 MDEDLTKRVVPGASKGQVAFQARGLDLNSNKASTRAKPRGRRKAXXXXXXXXXXXXXXXXXXXWEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYERKYGTEAEXXXXXXXXXXXXXXAMAERESLQRDEEKQLMEVIKASLVESLGAGEKDDRAVIAALEASKRDSENDAREEGEDPDVLKVMAESRRQHEAMQELRRVHGDMSSVRPQFQSAAETATTAVSFAGDQANRHPPLTQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVPMAPDWLVSELPVPAPAGTGGFVQAPRQGYQGQAYSAGIDQVHTASPPTPHPXXXXXXXXXXXXXXXVYAPHATGGGGGVHMETTHPGLEPTMAQHAYSVQQQQQQPMRIPSRFDDGNVGVPPXXXXXXXXXXPPSPSVQGPPALLXXXXXXXXTLDHGAKATQGALAGRQPASSQXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXKRDGLVAAGGAAQLAGWAVRGSATCGAPGGAGLLPPAPPVQKTAWGAAGQASDGLSAEERELEAVLEASRIAEETRQREDAESKIAMDMALKMSMMETSATPSGGERYGHGRGKYYQQPAATTGYPAQPPPLSAPAAANGFRPNGGGWQGQXXXXXPAPNASYTPMAXXXXXXXXXXXXXGAPTAVSPRAPGAYSAAGRPLSPRQQGAPSQVVPTRPPPADGSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELAWVLEQSRLEAEIQKSRMAIAEEGEEEMMXXXXXXXXXXQEKRNAEQLEFQRAMQASLGS 944
            MDEDLT RVVPGASKGQVAFQARGL+LNSNKAS RAKPRGRRKAXXXXXXX            WEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYE+KYGTEAE XXXXXXXXXXXXXAMAERESLQRDEEKQLMEVIKASLVE                                                                                                                                                                                                                                                                         GPPA      XXXXTLDH  +AT GAL GRQPASSQ     XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX          AAQLAGWAVRGSATCGAPGG G+LPPAPPVQK AWGAAGQASDGLSAEEREL+AVLEASRIAEETRQREDAESKIAMDMALKMSMMET A PS GERYGHGRG YYQQPAATTGYPAQPPPLS  A ANGFRP GGGWQGQ     PAPNA Y+PMA              A TAVSPRAPGAYSAAGRPLSPRQQGAPSQVVPTRPPPADGSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DELAWVLEQSRLEAEIQKSRMAIAEEGEEE  XXXXXXXXXX EKRNAEQLEFQRAMQASLGS
Sbjct:    1 MDEDLTNRVVPGASKGQVAFQARGLELNSNKASARAKPRGRRKAXXXXXXXLRTVKEEKEEA-WEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAERXXXXXXXXXXXXXAMAERESLQRDEEKQLMEVIKASLVE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPPA-----PXXXXTLDHRTEATPGALTGRQPASSQQAILHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQLAGWAVRGSATCGAPGGGGVLPPAPPVQKAAWGAAGQASDGLSAEERELKAVLEASRIAEETRQREDAESKIAMDMALKMSMMETPAAPSSGERYGHGRGNYYQQPAATTGYPAQPPPLSTSATANGFRPKGGGWQGQQQPPRPAPNAGYSPMATAAAAAPPPV----ASTAVSPRAPGAYSAAGRPLSPRQQGAPSQVVPTRPPPADGSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-DELAWVLEQSRLEAEIQKSRMAIAEEGEEEXXXXXXXXXXXXXEKRNAEQLEFQRAMQASLGS 640

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig80.16231.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig80.16231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5J997_9PHAE	0.000e+0	72.82	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FRG7_ECTSI	7.840e-215	62.01	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 905..932
None	No IPR available	COILS	Coil	Coil	coord: 651..671
None	No IPR available	COILS	Coil	Coil	coord: 212..232
IPR003903	Ubiquitin interacting motif	SMART	SM00726	uim	coord: 908..927 e-value: 41.0 score: 12.0 coord: 238..257 e-value: 1300.0 score: 0.2 coord: 284..303 e-value: 700.0 score: 2.3 coord: 184..203 e-value: 270.0 score: 5.6 coord: 879..898 e-value: 110.0 score: 8.7
IPR003903	Ubiquitin interacting motif	PROSITE	PS50330	UIM	coord: 908..927 score: 9.079

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig80	contig	E-siliculosus-1a_M_contig80:155537..163059 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig80.16231.1	mRNA_E-siliculosus-1a_M_contig80.16231.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig80 154886..163604 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig80.16231.1 ID=prot_E-siliculosus-1a_M_contig80.16231.1|Name=mRNA_E-siliculosus-1a_M_contig80.16231.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=945bp
MSGVYRKWDCQRRNPVDTTWKTTPKNKEMDEDLTKRVVPGASKGQVAFQA
RGLDLNSNKASTRAKPRGRRKAGGGGGGGGLRAVKEEEEEAWEAASRKRR
GQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGI
PQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAES
RRAYERKYGTEAEREKRREAQAKARVKAMAERESLQRDEEKQLMEVIKAS
LVESLGAGEKDDRAVIAALEASKRDSENDAREEGEDPDVLKVMAESRRQH
EAMQELRRVHGDMSSVRPQFQSAAETATTAVSFAGDQANRHPPLTQAAAA
PPVVEDQSVPTTLSAAPPPPPPPPPPTVPMAPDWLVSELPVPAPAGTGGF
VQAPRQGYQGQAYSAGIDQVHTASPPTPHPPPPPPPPPPPPPTPPVYAPH
ATGGGGGVHMETTHPGLEPTMAQHAYSVQQQQQQPMRIPSRFDDGNVGVP
PPPPPPVPVGVPPSPSVQGPPALLPPPPPPPPTLDHGAKATQGALAGRQP
ASSQQTILHHGTPPLTAQQQPWPQGGGAELSGHTMMNGAPPPPDDGKRDG
LVAAGGAAQLAGWAVRGSATCGAPGGAGLLPPAPPVQKTAWGAAGQASDG
LSAEERELEAVLEASRIAEETRQREDAESKIAMDMALKMSMMETSATPSG
GERYGHGRGKYYQQPAATTGYPAQPPPLSAPAAANGFRPNGGGWQGQQPP
PRPAPNASYTPMAAAAAAAAAAAPPPGAPTAVSPRAPGAYSAAGRPLSPR
QQGAPSQVVPTRPPPADGSVGGGGGESAEGGEEEDEAARELRIALEEEEQ
YYGAKDAAGRTGGQSPPLKAGASTGGGGQQEDELAWVLEQSRLEAEIQKS
RMAIAEEGEEEMMAKVLEASRLEQEKRNAEQLEFQRAMQASLGS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003903	UIM_dom