prot_E-siliculosus-1a_M_contig8.16195.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16195.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16195.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length277
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16195.1 vs. uniprot
Match: D7FNY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY0_ECTSI)

HSP 1 Score: 416 bits (1068), Expect = 1.100e-144
Identity = 228/250 (91.20%), Postives = 229/250 (91.60%), Query Frame = 0 
Query:    1 MTRVVLLQXXXXXXXXXXXXXAAAVNSSHLRPSSPTGASISQQQARTLHYTQCRSLSGSDKAPTTSSRDDKDADATAQTAPNTGTPPAAGGIFGNLPARTAAARAGRGCLIALPLAGIGFSAWTCVTDYRRVRHELKLARVGLALAEMSYQRDAGRKGDSGGDGGGANSATRPTFDASPARSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANRNAAEALARG 250
            MTRVVL Q    XX       AAAVNSSHLRPSSPTGASISQQQARTLHYT+CRSLSGSDKA TTSS DDKDADATAQ APNTGTPPAAGGIFGNLPARTAAARAGRGCLIALPLAGIGFSAWTCVTDYRRVRHELKLARVGLALAEMSYQRDAGRKGD G     ANSATRPTFDASPARSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANRNAAEALARG
Sbjct:    1 MTRVVL-QHHAAXXARLFLRRAAAVNSSHLRPSSPTGASISQQQARTLHYTRCRSLSGSDKASTTSSSDDKDADATAQRAPNTGTPPAAGGIFGNLPARTAAARAGRGCLIALPLAGIGFSAWTCVTDYRRVRHELKLARVGLALAEMSYQRDAGRKGDGGXXXXDANSATRPTFDASPARSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANRNAAEALARG 249
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16195.1 vs. uniprot
Match: A0A6H5KN63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN63_9PHAE)

HSP 1 Score: 382 bits (981), Expect = 4.590e-131
Identity = 213/252 (84.52%), Postives = 218/252 (86.51%), Query Frame = 0 
Query:   22 AAAVNSSHLRPSSPTGASISQQQARTLHYTQCRSLSGSDKAPTTSSRDDKDADATAQTAPNTGTPPAAGGIFGNLPARTAAARAGRGCLIALPLAGIGFSAWTCVTDYRRVRHELKLARVGLALAEMSYQRDAGRKGDSGGDGGGA--NSATRPTFDASPARSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANR---------NAAEALARGGGGTAPGARGDG 262
            AAA+NSSHLRP S TGASISQQQARTLHYTQCRSLSGSDKA T +SRDDKDADATAQTAPNTGTPPAAGGIFGNLPARTAAARAGRGCLIALP+ GIGFSAWTCVTDYRRVRHELK A VGLALAEMS+QR+AGRKGDS         NSATRPT DASP RSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANR          AAEALARG GGT   A  DG
Sbjct:   47 AAAINSSHLRPPSLTGASISQQQARTLHYTQCRSLSGSDKASTMNSRDDKDADATAQTAPNTGTPPAAGGIFGNLPARTAAARAGRGCLIALPIVGIGFSAWTCVTDYRRVRHELKRACVGLALAEMSFQREAGRKGDSXXXXXXXXXNSATRPTLDASPVRSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANRMRQISGRRRTAAEALARGEGGTGASAPSDG 298
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNY0_ECTSI1.100e-14491.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN63_9PHAE4.590e-13184.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..276

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:1889791..1890621 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16195.1mRNA_E-siliculosus-1a_M_contig8.16195.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 1889791..1890621 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16195.1 ID=prot_E-siliculosus-1a_M_contig8.16195.1|Name=mRNA_E-siliculosus-1a_M_contig8.16195.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=277bp
MTRVVLLQHHAAAAARLFLRRAAAVNSSHLRPSSPTGASISQQQARTLHY
TQCRSLSGSDKAPTTSSRDDKDADATAQTAPNTGTPPAAGGIFGNLPART
AAARAGRGCLIALPLAGIGFSAWTCVTDYRRVRHELKLARVGLALAEMSY
QRDAGRKGDSGGDGGGANSATRPTFDASPARSFSVALVADAGVLGFHLLA
AYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANRNAAEALARG
GGGTAPGARGDGGGESSGGGSHENTV*
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