prot_E-siliculosus-1a_M_contig8.16182.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16182.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16182.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length430
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16182.1 vs. uniprot
Match: D7FNZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNZ3_ECTSI)

HSP 1 Score: 733 bits (1893), Expect = 3.060e-265
Identity = 407/429 (94.87%), Postives = 417/429 (97.20%), Query Frame = 0
Query:    1 VGTCTCSCGGENWRSFNIVGRASCVPRAAYETFGYVGLALALMHLAHALYNLTQQRRSEAYWGGRGMVVKMLVDVYREQLSMISIIHAPVIALFFALVLWLPDESVRWSAVALGASQSLSGIGAVRTVQVLIRSADPRLLKKGATVLKVSAALTHPVGRYTSFSAVSIGAVCLVWLMLMARTGQGYKVAAISYILVEGLPILVTVMCSRSMIRIIDYSIAQDAAKQRALGDQSTSSACSAGSGHNRTITVDPKLAGAKKTIISAMFFCITLTSIASTVLIFALTTEYGYDNPIVFLATPLAFGPLIALSFHVQLHSKRNKARRRGQQSPPQSNVNSFGSSTSGVGRGRSGGRKITAASLMATLTGTSXXXXXXXXXXXXXXXXXXXXXMSNRVAPTEFSALEQAKGAQLARPAAPERRGNSVIADTVVE 429
            +GTCTCSCGGENWRSFNIVGRASCVPRAAYETFGYVGLALALMHLAHA+YNL QQRRSEAYWGGR MVVKMLVDVYREQLSMISI+HAPVIALFFALVLWLPDESVRWSAVALGASQSLSGIGAVRTVQVLIRSADPRLLKKGATVLKVSAALTHPVGRYTSFSAVSIGAVCL+WL LMARTGQGYKVAAISY+LVEGLPILVTVMCSRSMIRIIDYSIAQDAAKQRALGDQ+TSSACSAGSGHNRT+TVDPKLAGAKKTIISAMFFCITLT IASTVLIFALTTEYGYDNPIVFLATPLAFGPLIALSFHVQLHSKRNKARRRGQQSPPQSN+NSF SSTSG  RGRSGGRKITAASLMATLTGTS XXXXXXXXXXXXXXXXX   +SNRVAPT+FSALEQAKGAQLARPAAPERRGNSVIADT VE
Sbjct:    1 MGTCTCSCGGENWRSFNIVGRASCVPRAAYETFGYVGLALALMHLAHAVYNLIQQRRSEAYWGGRRMVVKMLVDVYREQLSMISILHAPVIALFFALVLWLPDESVRWSAVALGASQSLSGIGAVRTVQVLIRSADPRLLKKGATVLKVSAALTHPVGRYTSFSAVSIGAVCLIWLTLMARTGQGYKVAAISYVLVEGLPILVTVMCSRSMIRIIDYSIAQDAAKQRALGDQTTSSACSAGSGHNRTMTVDPKLAGAKKTIISAMFFCITLTGIASTVLIFALTTEYGYDNPIVFLATPLAFGPLIALSFHVQLHSKRNKARRRGQQSPPQSNLNSFCSSTSGDARGRSGGRKITAASLMATLTGTSDXXXXXXXXXXXXXXXXXWKNVSNRVAPTDFSALEQAKGAQLARPAAPERRGNSVIADTAVE 429          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16182.1 vs. uniprot
Match: D7FNZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNZ4_ECTSI)

HSP 1 Score: 425 bits (1093), Expect = 6.670e-144
Identity = 254/417 (60.91%), Postives = 293/417 (70.26%), Query Frame = 0
Query:    1 VGTCTCSCGGENWRSFNIVGRASCVPRAAYETFGYVGLALALMHLAHALYNLTQQRRSEAYWGGRGMVVKMLVDVYREQLSMISIIHAPVIALFFALVLWLPDESVRWSAVALGASQSLSGIGAVRTVQVLIRSADPRLLKKGATVLKVSAALTHPVGRYTSFSAVSIGAVCLVWLMLMARTGQGYKVAAISYILVEGLPILVTVMCSRSMIRIIDYSIAQDAAKQRALGDQSTSSACSAGSGHNRTITVDPKLAGAKKTIISAMFFCITLTSIASTVLIFALTTEYGYDNPIVFLATPLAFGPLIALSFHVQLHSKRNKARRRGQQSPPQSNVNSFGSSTSGVGRGRSGGRKITAASLMATLTGTSXXXXXXXXXXXXXXXXXXXXXMSNRVAPTEFSALEQAKGAQLARPAAPER 417
            VGTCTCSCG ENWR+FNIVG ASCVP A +E FG VGLAL+L+HL HA YNL QQRR EA    RGM V+M VDVYREQLSMI++IHA VI L+FAL LWLPDESVRWSAVALG S  LSGIGAV TVQVLIRS DPRLLK  A +LK SAAL HPVGR  +FS+VSIGAV L++L  +A TGQGYK+AAI+YI+V  L IL+ VMCSRSMI IID S+A+D A Q+A G Q   S  S  S   + I  DPKLA AK+TI+SA+FFCITLTSIAS  LIFALTTEYG DNPIVFLA PLA+GPLIALSFHVQLHSKRNKA  R  + P Q+ + + G     +G G   G K  + S+  T +  S                        RV PT+ +A E  +G Q   PA+P +
Sbjct:    5 VGTCTCSCG-ENWRAFNIVGHASCVPWAVFEAFGSVGLALSLVHLVHAAYNLKQQRRCEAMQSDRGMAVRMRVDVYREQLSMITVIHALVIGLYFALGLWLPDESVRWSAVALGVSHILSGIGAVLTVQVLIRSVDPRLLKMDAVILKASAALAHPVGRCLTFSSVSIGAVFLIFLTFIAWTGQGYKIAAIAYIVVTVLRILLIVMCSRSMINIIDGSMARDIASQKAQGAQRGRSVLSGDSTSFKKIKADPKLAAAKRTILSALFFCITLTSIASAFLIFALTTEYGTDNPIVFLALPLAYGPLIALSFHVQLHSKRNKALLR--RVPVQNPIATKGEV---IGFGSGDGFKKASGSVGTTTSAKSGRNNTT----------------GGRVVPTQGTAEEGGEGGQT--PASPAK 397          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16182.1 vs. uniprot
Match: A0A6H5KF70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF70_9PHAE)

HSP 1 Score: 373 bits (957), Expect = 6.470e-123
Identity = 212/324 (65.43%), Postives = 238/324 (73.46%), Query Frame = 0
Query:    1 VGTCTCSCGGENWRSFNIVGRASCVPRAAYETFGYVGLALALMHLAHALYNLTQQRRSEAYWGGRGMVVKMLVDVYREQLSMISIIHAPVIALFFALVLWLPDESVRWSAVALGASQSLSGIGAVRTVQVLIRSADPRLLKKGATVLKVSAALTHPVGRYTSFSAVSIGAVCLVWLMLMARTGQGYKVAAISYILVEGLPILVTVMCSRSMIRIIDYSIAQDAAKQRALGDQSTSSACSAGSGHNRTITVDPKLAGAKKTIISAMFFCITLTSIASTVLIFALTTEYGYDNPIVFLATPLAFGPLIALSFHVQLHSKRNKARRR 324
            VGTCTCSCG ENWR+FNIVG ASCVP A +E FG  GLA +L+HL HA +NL QQ    +    RGM V+MLVDVYREQLSMI++IHAPVI L+FA  LWLPDE VRWSAVALG S  LSGIGAV TVQVL                  SAAL HPVGR  +F +VSIGAV L++L L+A TGQGYK+AAI+YI+V  L IL+ VMCSRSMI IID S+ +D A QRA    S  S     S   + I  DPKLA AK+TI+SA+FFCITLTSIAS VLIFALTTEYG +NPIVFLA PLAFGPLIALSFHVQLHSKRNK   R
Sbjct:    5 VGTCTCSCG-ENWRAFNIVGHASCVPCAVFEAFGSGGLAFSLVHLVHAAHNLKQQVGDLSE---RGMAVRMLVDVYREQLSMITVIHAPVIGLYFAFGLWLPDEGVRWSAVALGVSHILSGIGAVLTVQVLXXXXXXXXXXXXXXXXXASAALAHPVGRCLTFFSVSIGAVFLIFLTLIASTGQGYKIAAIAYIVVTVLRILLIVMCSRSMINIIDGSMERDIASQRAQDAHSGGSVLGGDSTSAKKIKADPKLAAAKRTILSALFFCITLTSIASAVLIFALTTEYGNNNPIVFLALPLAFGPLIALSFHVQLHSKRNKVLLR 324          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16182.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FNZ3_ECTSI3.060e-26594.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FNZ4_ECTSI6.670e-14460.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KF70_9PHAE6.470e-12365.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 293..314
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 179..189
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..178
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 282..292
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 315..429
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 209..260
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 190..208
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 261..281
NoneNo IPR availableTMHMMTMhelixcoord: 157..179
NoneNo IPR availableTMHMMTMhelixcoord: 28..50
NoneNo IPR availableTMHMMTMhelixcoord: 293..315
NoneNo IPR availableTMHMMTMhelixcoord: 80..102
NoneNo IPR availableTMHMMTMhelixcoord: 261..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:1730854..1732829 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16182.1mRNA_E-siliculosus-1a_M_contig8.16182.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 1730854..1732829 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16182.1 ID=prot_E-siliculosus-1a_M_contig8.16182.1|Name=mRNA_E-siliculosus-1a_M_contig8.16182.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=430bp
VGTCTCSCGGENWRSFNIVGRASCVPRAAYETFGYVGLALALMHLAHALY
NLTQQRRSEAYWGGRGMVVKMLVDVYREQLSMISIIHAPVIALFFALVLW
LPDESVRWSAVALGASQSLSGIGAVRTVQVLIRSADPRLLKKGATVLKVS
AALTHPVGRYTSFSAVSIGAVCLVWLMLMARTGQGYKVAAISYILVEGLP
ILVTVMCSRSMIRIIDYSIAQDAAKQRALGDQSTSSACSAGSGHNRTITV
DPKLAGAKKTIISAMFFCITLTSIASTVLIFALTTEYGYDNPIVFLATPL
AFGPLIALSFHVQLHSKRNKARRRGQQSPPQSNVNSFGSSTSGVGRGRSG
GRKITAASLMATLTGTSGRKNTAASVMATLTGTSGRKNMSNRVAPTEFSA
LEQAKGAQLARPAAPERRGNSVIADTVVE*
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