prot_E-siliculosus-1a_M_contig8.16123.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16123.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16123.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length161
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16123.1 vs. uniprot
Match: D7G7X8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X8_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 9.730e-9
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 0 
Query:   69 LPRPVLLSTAGLDIDWHRRVLHSLGVGGSV 98
            LPRPVLLSTAGLDIDWHRRVLHSLGVG S+
Sbjct:   27 LPRPVLLSTAGLDIDWHRRVLHSLGVGDSL 56
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16123.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7X8_ECTSI9.730e-993.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:1086773..1087822 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16123.1mRNA_E-siliculosus-1a_M_contig8.16123.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 1086773..1088491 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16123.1 ID=prot_E-siliculosus-1a_M_contig8.16123.1|Name=mRNA_E-siliculosus-1a_M_contig8.16123.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=161bp
MVCAERTALACPPRPRAQADAGGVCAGVRRYGLITPSVGQDPLGNVPDGE
GFPCRPAQGSLRGAAEDRLPRPVLLSTAGLDIDWHRRVLHSLGVGGSVSP
TKTANAPQPCDQGVPRPAHTSDHQGLDRTGTVDDYFRLVRSRGGAVGRVR
CGHGRPGAQRG
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