prot_E-siliculosus-1a_M_contig8.16106.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig8.16106.1
Unique Name	prot_E-siliculosus-1a_M_contig8.16106.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	1108

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig8.16106.1 vs. uniprot
Match: A0A6H5K1B7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1B7_9PHAE)

HSP 1 Score: 1212 bits (3136), Expect = 0.000e+0
Identity = 782/894 (87.47%), Postives = 798/894 (89.26%), Query Frame = 0

Query:   19 MIHPDRIAPDPTEGWRRGSRGALRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKARAEDEKRPRTGMDAQQQAGLAIKDSPEHKAAVHQQHAGVPHPPSXXXXXIGTIAGLDSSSXXXXXXXXXXXXGLPMSNPKFGGPITSDSLSGLVELIAPTLSDTGGSGSSASISXXXXXXISSSCHGGGEAAYSHHAAAASGNNRYTAIPGLNAEGVSPFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TPPSCPVRDLPARAKSMGDTPGGFGEAGXXXXXXX------VQAGFFPEGSMGSTFMRRQDGGSEGRQHASSALGAPLPQQQQLPPRGSLPMTLDGRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDAGGGDPEQLPDAPTAADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMGALSRCLDAPLPEVASVMLLLCLFWMHSMETRKVARYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGHGAIGAGGMSPRVAPSKVLTDLLTKAAKALEADARDGNRNPEHVLALLHGLRAYTHAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSRPAPEGVHVEALGAAVTKLSFARSTQAVKPGTGGVAXXXXXXXXXWCAFGDDILAAFXXXXXXRDSGGDVLSEAANDNRDRPRSGSMSPPPRRSVRPLSRAVIASQSWQPTTGGAAMPIPSSSAGATSGRESSASLPRWSG 904
            MIHPDR+APDPTEGWRRGSRG LRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKARAEDEKRPRTGMDAQQQAGLAIKDSPEHK A+HQQHAGVPHPPS     IGTIAGLDSSS            GLP+SNPKFGGP+TSDSLSGLVELIAPTLSDTGGSGSSASI+      ISSSCHGGGEAAYSHHAAA SGNNRYTAIPGL+AEGVSPFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  TPPSCPVRDLPARAKSMGDTPGGFG+AGXXXXXXX      VQAGFF EGSM +TFMR+QDGGSEGRQHASSALGAPLPQQQ+LPPRGSLPMTLDGRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDA GGDP+Q PDAP AADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAM AL+RCLDAPLPEVASVMLL CLFWMHSMETRKV+RYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGG GAIGAGG+SPRVAPSK                      N E+     H   AYTHAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSRP PEGVHVEALGAAVTKLSFAR TQ V+PG GGVAXXXXXXXXX            XXXX  RD GGDVLSEA NDNRD PRSGSMSPPPRRSVRPLSRAVIASQSWQPTTGGAAMPIPSSSA  TSGRESSASLPRWSG
Sbjct:    1 MIHPDRVAPDPTEGWRRGSRGPLRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKARAEDEKRPRTGMDAQQQAGLAIKDSPEHKPAMHQQHAGVPHPPSPSLPPIGTIAGLDSSSNNMTGGGGD---GLPVSNPKFGGPMTSDSLSGLVELIAPTLSDTGGSGSSASITASINASISSSCHGGGEAAYSHHAAAVSGNNRYTAIPGLHAEGVSPFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPSCPVRDLPARAKSMGDTPGGFGQAGXXXXXXXXXXXXXVQAGFFSEGSMENTFMRQQDGGSEGRQHASSALGAPLPQQQRLPPRGSLPMTLDGRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDASGGDPKQSPDAPIAADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMRALARCLDAPLPEVASVMLLFCLFWMHSMETRKVSRYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGQGAIGAGGLSPRVAPSK----------------------NNEYPTLPAHA--AYTHAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSRPTPEGVHVEALGAAVTKLSFARPTQVVRPGAGGVAXXXXXXXXXXXXX--XXXXXXXXXXGGRDIGGDVLSEATNDNRDPPRSGSMSPPPRRSVRPLSRAVIASQSWQPTTGGAAMPIPSSSADGTSGRESSASLPRWSG 865

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BLAST of mRNA_E-siliculosus-1a_M_contig8.16106.1 vs. uniprot
Match: D8LQH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH3_ECTSI)

HSP 1 Score: 1189 bits (3077), Expect = 0.000e+0
Identity = 673/765 (87.97%), Postives = 678/765 (88.63%), Query Frame = 0

Query:  344 MGDTPGGFGEAGXXXXXXX-VQAGFFPEGSMGSTFMRRQDGGSEGRQHASSALGAPLPQQQQLPPRGSLPMTLDGRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDAGGGDPEQLPDAPTAADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMGALSRCLDAPLPEVASVMLLLCLFWMHSMETRKVARYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGHGAIGAGGMSPRVAPSKVLTDLLTKAAKALEADARDGNRNPEHVLALLHGLRAYTHAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSRPAPEGVHVEALGAAVTKLSFARSTQAVKPGTGGVAXXXXXXXXXWCAFGDDILAAFXXXXXXRDSGGDVLSEAANDNRDRPRSGSMSPPPRRSVRPLSRAVIASQSWQPTTGGAAMPIPSSSAGATSGRESSASLPRWSGXXXXXXXXXXXXXXXXXXAVHRSVLLGSNAAAAPSDWVDRVRKMPTIASSPRASSPNVVQRMGGNGGGNGSDVRSPSPRQEDNNCTSPRSMGMLHPGPMPSAAPNVGVKYMSEPRDNLALLSTVAAPGGYNNPPRRASYEDRSGVERQPAARQRLTGQPGGGGAADRDGADDLPPPANPGLTTGMSFDPNRDDGTFQFTLGPS 1107
            MGDTPGGFGEAGXXXXXXX VQAGFFP+GSMGSTFMR+QDGGSEGRQHASSALGAPLPQQQQLPPR SLPMTLDGRSKTHLKTFMRTVGSLILLPGA AIRSAVFGDAGGGDPEQLPDAPTAADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMGALSRCLDAPLPEVASVMLLLCLFWMHSMETRKVARYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGG GAIGAGG+SPRVAPSKVLTDLLTKAAKALEADARDGNRNPEHVLALLHGLRA+THAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSRPAPEGVHVEALGAAVTKLSFARSTQAVKPG GGVAXXXXXXXXX            XXXXXX     DVLSEAANDNRDR RSGSMSPPPRRSVRPLSRA IASQSWQPTTGGAAMPIPSSSAG  SGRESSASLPRWSG                   VHRSVLLGSNAAAAPSDWVDRVRKMPTIASSPRASSPNVV RMGGNGGGNG DVRSPSPRQEDNNCTSPRSMGMLHPGPMPSAAP+VGVKYMSEPRDNLALLSTVAAPGGYNNP                                       LPPPANPGL TGMSFDPNRDDGTFQFTLGPS
Sbjct:    1 MGDTPGGFGEAGXXXXXXXXVQAGFFPKGSMGSTFMRQQDGGSEGRQHASSALGAPLPQQQQLPPRRSLPMTLDGRSKTHLKTFMRTVGSLILLPGAGAIRSAVFGDAGGGDPEQLPDAPTAADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMGALSRCLDAPLPEVASVMLLLCLFWMHSMETRKVARYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGQGAIGAGGLSPRVAPSKVLTDLLTKAAKALEADARDGNRNPEHVLALLHGLRAFTHAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSRPAPEGVHVEALGAAVTKLSFARSTQAVKPGAGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DVLSEAANDNRDRSRSGSMSPPPRRSVRPLSRAAIASQSWQPTTGGAAMPIPSSSAGGASGRESSASLPRWSGGGAAPAGAPSSSCSS---GVHRSVLLGSNAAAAPSDWVDRVRKMPTIASSPRASSPNVVHRMGGNGGGNGGDVRSPSPRQEDNNCTSPRSMGMLHPGPMPSAAPSVGVKYMSEPRDNLALLSTVAAPGGYNNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPPANPGLATGMSFDPNRDDGTFQFTLGPS 761

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BLAST of mRNA_E-siliculosus-1a_M_contig8.16106.1 vs. uniprot
Match: A0A6H5K6R5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6R5_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 4.830e-75
Identity = 126/140 (90.00%), Postives = 128/140 (91.43%), Query Frame = 0

Query:  966 MGGNGGGNGSDVRSPSPRQEDNNCTSPRSMGMLHPGPMPSAAPNVGVKYMSEPRDNLALLSTVAAPGGYNNPPRRASYEDRSGVERQPAARQRLTGQPGGGGAADRDGADDLPPPANPGLTTGMSFDPNRDDGTFQFTLG 1105
            MGGNGGGNG DVRSPSPRQE NN TSPR MGMLHPGPMP+AAPNVGVKYMSEP DNLALLSTVAAPG YNNPPRRASYEDRSGVERQ A RQR+  QP GGGAADRDG DDLPPPANPGLTTGMSFDPNRDDGTFQFTLG
Sbjct:    1 MGGNGGGNGGDVRSPSPRQEGNNITSPRFMGMLHPGPMPTAAPNVGVKYMSEPCDNLALLSTVAAPGAYNNPPRRASYEDRSGVERQAAVRQRIAAQPSGGGAADRDGGDDLPPPANPGLTTGMSFDPNRDDGTFQFTLG 140

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BLAST of mRNA_E-siliculosus-1a_M_contig8.16106.1 vs. uniprot
Match: A0A6H5KIX7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIX7_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 6.980e-5
Identity = 23/45 (51.11%), Postives = 34/45 (75.56%), Query Frame = 0

Query:   39 GALRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKA 83
            G LRKSCD+C SSK +C G  PC RC +R+  C +++R++CGP++
Sbjct:   46 GFLRKSCDSCVSSKRRCDGQDPCTRCLRRKKPCHYTERKKCGPRS 90

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig8.16106.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig8.16106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A6H5K1B7_9PHAE	0.000e+0	87.47	Zn(2)-C6 fungal-type domain-containing protein (Fr...	[more]
D8LQH3_ECTSI	0.000e+0	87.97	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K6R5_9PHAE	4.830e-75	90.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KIX7_9PHAE	6.980e-5	51.11	Zn(2)-C6 fungal-type domain-containing protein n=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036864	Zn(2)-C6 fungal-type DNA-binding domain superfamily	GENE3D	4.10.240.10		coord: 38..99 e-value: 3.7E-5 score: 25.6
IPR036864	Zn(2)-C6 fungal-type DNA-binding domain superfamily	SUPERFAMILY	57701	Zn2/Cys6 DNA-binding domain	coord: 37..78
None	No IPR available	PANTHER	PTHR47663	FAMILY NOT NAMED	coord: 29..129
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 537..554
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..536
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 555..1107
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	PROSITE	PS00463	ZN2_CY6_FUNGAL_1	coord: 44..71
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	PROSITE	PS50048	ZN2_CY6_FUNGAL_2	coord: 44..73 score: 9.424

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig8	contig	E-siliculosus-1a_M_contig8:892644..900720 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig8.16106.1	mRNA_E-siliculosus-1a_M_contig8.16106.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig8 892627..902230 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16106.1 ID=prot_E-siliculosus-1a_M_contig8.16106.1|Name=mRNA_E-siliculosus-1a_M_contig8.16106.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1108bp
MAEDSNSSDSSTATKAAAMIHPDRIAPDPTEGWRRGSRGALRKSCDTCTS
SKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKARAEDEKRPRTGMDAQQQ
AGLAIKDSPEHKAAVHQQHAGVPHPPSPPLPPIGTIAGLDSSSNNMTGGG
GGGGGGLPMSNPKFGGPITSDSLSGLVELIAPTLSDTGGSGSSASISASI
NASISSSCHGGGEAAYSHHAAAASGNNRYTAIPGLNAEGVSPFLGGGGTS
PPHHNQHGASRGGASNRPGFPPSSSVAAVATLSSLSAAIDHTSRQQPGGG
GGARDSLVASRSAPPLVAAAGGGAPSSTPPSCPVRDLPARAKSMGDTPGG
FGEAGGGGGGGGVQAGFFPEGSMGSTFMRRQDGGSEGRQHASSALGAPLP
QQQQLPPRGSLPMTLDGRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDA
GGGDPEQLPDAPTAADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRA
EAWAAAAVGAQFSGASEEECKDYQSRAMGALSRCLDAPLPEVASVMLLLC
LFWMHSMETRKVARYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLN
LDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHD
GAGRGGHGAIGAGGMSPRVAPSKVLTDLLTKAAKALEADARDGNRNPEHV
LALLHGLRAYTHAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEA
SRRLLAAAAERSSRPAPEGVHVEALGAAVTKLSFARSTQAVKPGTGGVAA
AAGGGGGGWCAFGDDILAAFAGAGGGRDSGGDVLSEAANDNRDRPRSGSM
SPPPRRSVRPLSRAVIASQSWQPTTGGAAMPIPSSSAGATSGRESSASLP
RWSGGGAAPAGAPSSSSSSCSSAVHRSVLLGSNAAAAPSDWVDRVRKMPT
IASSPRASSPNVVQRMGGNGGGNGSDVRSPSPRQEDNNCTSPRSMGMLHP
GPMPSAAPNVGVKYMSEPRDNLALLSTVAAPGGYNNPPRRASYEDRSGVE
RQPAARQRLTGQPGGGGAADRDGADDLPPPANPGLTTGMSFDPNRDDGTF
QFTLGPS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001138	Zn2-C6_fun-type_DNA-bd
IPR036864	Zn2-C6_fun-type_DNA-bd_sf