mRNA_E-siliculosus-1a_M_contig8.16106.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16106.1 vs. uniprot
Match: A0A6H5K1B7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1B7_9PHAE) HSP 1 Score: 1212 bits (3136), Expect = 0.000e+0 Identity = 782/894 (87.47%), Postives = 798/894 (89.26%), Query Frame = 3
Query: 72 MIHPDRIAPDPTEGWRRGSRGALRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKARAEDEKRPRTGMDAQQQAGLAIKDSPEHKAAVHQQHAGVPHPPSXXXXXIGTIAGLDSSSXXXXXXXXXXXXGLPMSNPKFGGPITSDSLSGLVELIAPTLSDTGGSGSSASISXXXXXXISSSCHGGGEAAYSHHAAAASGNNRYTAIPGLNAEGVSPFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TPPSCPVRDLPARAKSMGDTPGGFGEAGXXXXXXX------VQAGFFPEGSMGSTFMRRQDGGSEGRQHASSALGAPLPQQQQLPPRGSLPMTLDGRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDAGGGDPEQLPDAPTAADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMGALSRCLDAPLPEVASVMLLLCLFWMHSMETRKVARYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGHGAIGAGGMSPRVAPSKVLTDLLTKAAKALEADARDGNRNPEHVLALLHGLRAYTHAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSRPAPEGVHVEALGAAVTKLSFARSTQAVKPGTGGVAXXXXXXXXXWCAFGDDILAAFXXXXXXRDSGGDVLSEAANDNRDRPRSGSMSPPPRRSVRPLSRAVIASQSWQPTTGGAAMPIPSSSAGATSGRESSASLPRWSG 2729
MIHPDR+APDPTEGWRRGSRG LRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKARAEDEKRPRTGMDAQQQAGLAIKDSPEHK A+HQQHAGVPHPPS IGTIAGLDSSS GLP+SNPKFGGP+TSDSLSGLVELIAPTLSDTGGSGSSASI+ ISSSCHGGGEAAYSHHAAA SGNNRYTAIPGL+AEGVSPFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TPPSCPVRDLPARAKSMGDTPGGFG+AGXXXXXXX VQAGFF EGSM +TFMR+QDGGSEGRQHASSALGAPLPQQQ+LPPRGSLPMTLDGRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDA GGDP+Q PDAP AADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAM AL+RCLDAPLPEVASVMLL CLFWMHSMETRKV+RYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGG GAIGAGG+SPRVAPSK N E+ H AYTHAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSRP PEGVHVEALGAAVTKLSFAR TQ V+PG GGVAXXXXXXXXX XXXX RD GGDVLSEA NDNRD PRSGSMSPPPRRSVRPLSRAVIASQSWQPTTGGAAMPIPSSSA TSGRESSASLPRWSG
Sbjct: 1 MIHPDRVAPDPTEGWRRGSRGPLRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKARAEDEKRPRTGMDAQQQAGLAIKDSPEHKPAMHQQHAGVPHPPSPSLPPIGTIAGLDSSSNNMTGGGGD---GLPVSNPKFGGPMTSDSLSGLVELIAPTLSDTGGSGSSASITASINASISSSCHGGGEAAYSHHAAAVSGNNRYTAIPGLHAEGVSPFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPSCPVRDLPARAKSMGDTPGGFGQAGXXXXXXXXXXXXXVQAGFFSEGSMENTFMRQQDGGSEGRQHASSALGAPLPQQQRLPPRGSLPMTLDGRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDASGGDPKQSPDAPIAADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMRALARCLDAPLPEVASVMLLFCLFWMHSMETRKVSRYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGQGAIGAGGLSPRVAPSK----------------------NNEYPTLPAHA--AYTHAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSRPTPEGVHVEALGAAVTKLSFARPTQVVRPGAGGVAXXXXXXXXXXXXX--XXXXXXXXXXGGRDIGGDVLSEATNDNRDPPRSGSMSPPPRRSVRPLSRAVIASQSWQPTTGGAAMPIPSSSADGTSGRESSASLPRWSG 865
BLAST of mRNA_E-siliculosus-1a_M_contig8.16106.1 vs. uniprot
Match: D8LQH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH3_ECTSI) HSP 1 Score: 1189 bits (3076), Expect = 0.000e+0 Identity = 673/765 (87.97%), Postives = 678/765 (88.63%), Query Frame = 3
Query: 1047 MGDTPGGFGEAGXXXXXXX-VQAGFFPEGSMGSTFMRRQDGGSEGRQHASSALGAPLPQQQQLPPRGSLPMTLDGRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDAGGGDPEQLPDAPTAADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMGALSRCLDAPLPEVASVMLLLCLFWMHSMETRKVARYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGHGAIGAGGMSPRVAPSKVLTDLLTKAAKALEADARDGNRNPEHVLALLHGLRAYTHAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSRPAPEGVHVEALGAAVTKLSFARSTQAVKPGTGGVAXXXXXXXXXWCAFGDDILAAFXXXXXXRDSGGDVLSEAANDNRDRPRSGSMSPPPRRSVRPLSRAVIASQSWQPTTGGAAMPIPSSSAGATSGRESSASLPRWSGXXXXXXXXXXXXXXXXXXAVHRSVLLGSNAAAAPSDWVDRVRKMPTIASSPRASSPNVVQRMGGNGGGNGSDVRSPSPRQEDNNCTSPRSMGMLHPGPMPSAAPNVGVKYMSEPRDNLALLSTVAAPGGYNNPPRRASYEDRSGVERQPAARQRLTGQPGGGGAADRDGADDLPPPANPGLTTGMSFDPNRDDGTFQFTLGPS 3338
MGDTPGGFGEAGXXXXXXX VQAGFFP+GSMGSTFMR+QDGGSEGRQHASSALGAPLPQQQQLPPR SLPMTLDGRSKTHLKTFMRTVGSLILLPGA AIRSAVFGDAGGGDPEQLPDAPTAADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMGALSRCLDAPLPEVASVMLLLCLFWMHSMETRKVARYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGG GAIGAGG+SPRVAPSKVLTDLLTKAAKALEADARDGNRNPEHVLALLHGLRA+THAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSRPAPEGVHVEALGAAVTKLSFARSTQAVKPG GGVAXXXXXXXXX XXXXXX DVLSEAANDNRDR RSGSMSPPPRRSVRPLSRA IASQSWQPTTGGAAMPIPSSSAG SGRESSASLPRWSG VHRSVLLGSNAAAAPSDWVDRVRKMPTIASSPRASSPNVV RMGGNGGGNG DVRSPSPRQEDNNCTSPRSMGMLHPGPMPSAAP+VGVKYMSEPRDNLALLSTVAAPGGYNNP LPPPANPGL TGMSFDPNRDDGTFQFTLGPS
Sbjct: 1 MGDTPGGFGEAGXXXXXXXXVQAGFFPKGSMGSTFMRQQDGGSEGRQHASSALGAPLPQQQQLPPRRSLPMTLDGRSKTHLKTFMRTVGSLILLPGAGAIRSAVFGDAGGGDPEQLPDAPTAADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMGALSRCLDAPLPEVASVMLLLCLFWMHSMETRKVARYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGQGAIGAGGLSPRVAPSKVLTDLLTKAAKALEADARDGNRNPEHVLALLHGLRAFTHAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSRPAPEGVHVEALGAAVTKLSFARSTQAVKPGAGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DVLSEAANDNRDRSRSGSMSPPPRRSVRPLSRAAIASQSWQPTTGGAAMPIPSSSAGGASGRESSASLPRWSGGGAAPAGAPSSSCSS---GVHRSVLLGSNAAAAPSDWVDRVRKMPTIASSPRASSPNVVHRMGGNGGGNGGDVRSPSPRQEDNNCTSPRSMGMLHPGPMPSAAPSVGVKYMSEPRDNLALLSTVAAPGGYNNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPPANPGLATGMSFDPNRDDGTFQFTLGPS 761
BLAST of mRNA_E-siliculosus-1a_M_contig8.16106.1 vs. uniprot
Match: A0A6H5K6R5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6R5_9PHAE) HSP 1 Score: 253 bits (646), Expect = 2.920e-74 Identity = 126/140 (90.00%), Postives = 128/140 (91.43%), Query Frame = 3
Query: 2913 MGGNGGGNGSDVRSPSPRQEDNNCTSPRSMGMLHPGPMPSAAPNVGVKYMSEPRDNLALLSTVAAPGGYNNPPRRASYEDRSGVERQPAARQRLTGQPGGGGAADRDGADDLPPPANPGLTTGMSFDPNRDDGTFQFTLG 3332
MGGNGGGNG DVRSPSPRQE NN TSPR MGMLHPGPMP+AAPNVGVKYMSEP DNLALLSTVAAPG YNNPPRRASYEDRSGVERQ A RQR+ QP GGGAADRDG DDLPPPANPGLTTGMSFDPNRDDGTFQFTLG
Sbjct: 1 MGGNGGGNGGDVRSPSPRQEGNNITSPRFMGMLHPGPMPTAAPNVGVKYMSEPCDNLALLSTVAAPGAYNNPPRRASYEDRSGVERQAAVRQRIAAQPSGGGAADRDGGDDLPPPANPGLTTGMSFDPNRDDGTFQFTLG 140 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16106.1 >prot_E-siliculosus-1a_M_contig8.16106.1 ID=prot_E-siliculosus-1a_M_contig8.16106.1|Name=mRNA_E-siliculosus-1a_M_contig8.16106.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1108bp MAEDSNSSDSSTATKAAAMIHPDRIAPDPTEGWRRGSRGALRKSCDTCTSback to top mRNA from alignment at E-siliculosus-1a_M_contig8:892627..902230+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16106.1 ID=mRNA_E-siliculosus-1a_M_contig8.16106.1|Name=mRNA_E-siliculosus-1a_M_contig8.16106.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=9604bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:892627..902230+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:892627..902230+ >mRNA_E-siliculosus-1a_M_contig8.16106.1 ID=mRNA_E-siliculosus-1a_M_contig8.16106.1|Name=mRNA_E-siliculosus-1a_M_contig8.16106.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=6648bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:892627..902230+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |