prot_E-siliculosus-1a_M_contig8.16096.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16096.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16096.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length226
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16096.1 vs. uniprot
Match: D8LQI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI4_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 2.290e-71
Identity = 111/115 (96.52%), Postives = 113/115 (98.26%), Query Frame = 0 
Query:    1 MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPPHTVGNRSGGDNYAWIGRKCRYSCDEGARVARDRATPSPERFTQAPARVRKADVVPSQPSMLFVDAVA 115
            MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPP+TVGNRSGGDNYAWIGRKCRYSCDEGARVARDRATPSP RFTQAPARVRKA+VVPSQPSM FVDAVA
Sbjct:    1 MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPPNTVGNRSGGDNYAWIGRKCRYSCDEGARVARDRATPSPGRFTQAPARVRKANVVPSQPSMPFVDAVA 115
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16096.1 vs. uniprot
Match: A0A6H5KSK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK6_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 2.320e-56
Identity = 82/84 (97.62%), Postives = 84/84 (100.00%), Query Frame = 0 
Query:    1 MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPPHTVGNRSGGDNYAWIGRKCRYSCDEGARVARDRATP 84
            MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPPHTVGN+SGGDNYAWIGRKCRYSC+EGARVARDRATP
Sbjct:    1 MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPPHTVGNKSGGDNYAWIGRKCRYSCEEGARVARDRATP 84
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16096.1 vs. uniprot
Match: D8LQI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI3_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 1.410e-48
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 0 
Query:    1 MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPPHTVGNRSGGDNYAWIGRKCRYSCDEGARVARDRATP 84
            MTTMA MRYFY+TDDDFIPLKIDNDGD+ C+KCRRAFWKGETIEIIPP+TV N+SGGDNYAWIGR+CRYSCD GAR ARDRATP
Sbjct:    1 MTTMAHMRYFYHTDDDFIPLKIDNDGDKSCYKCRRAFWKGETIEIIPPNTVKNKSGGDNYAWIGRRCRYSCDGGARGARDRATP 84
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16096.1 vs. uniprot
Match: A0A6H5JYS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYS8_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 8.040e-7
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0 
Query:   85 SPERFTQAPARVRKADVVPSQPSMLFVDAVA 115
            SPERFTQAPARVRKADVVP QPSMLFVDAVA
Sbjct:    8 SPERFTQAPARVRKADVVPPQPSMLFVDAVA 38
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16096.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LQI4_ECTSI2.290e-7196.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSK6_9PHAE2.320e-5697.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQI3_ECTSI1.410e-4886.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYS8_9PHAE8.040e-796.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:740053..746036 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16096.1mRNA_E-siliculosus-1a_M_contig8.16096.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 739970..746799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16096.1 ID=prot_E-siliculosus-1a_M_contig8.16096.1|Name=mRNA_E-siliculosus-1a_M_contig8.16096.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=226bp
MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPPHT
VGNRSGGDNYAWIGRKCRYSCDEGARVARDRATPSPERFTQAPARVRKAD
VVPSQPSMLFVDAVAVPSETSEFIPQAVAVSPEPSVPVSSMGVARAQPSG
RDQETVVVPPKPSAPVQETVPVPPQSPEPTQGTEAAPPLPSAPVFSVGVA
SPQRSGRVVRGAVAPPHRRRLFKGR*
back to top