mRNA_E-siliculosus-1a_M_contig8.16096.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16096.1
Unique NamemRNA_E-siliculosus-1a_M_contig8.16096.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16096.1 vs. uniprot
Match: D8LQI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI4_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 2.270e-67
Identity = 111/115 (96.52%), Postives = 113/115 (98.26%), Query Frame = 3 
Query:   84 MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPPHTVGNRSGGDNYAWIGRKCRYSCDEGARVARDRATPSPERFTQAPARVRKADVVPSQPSMLFVDAVA 428
            MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPP+TVGNRSGGDNYAWIGRKCRYSCDEGARVARDRATPSP RFTQAPARVRKA+VVPSQPSM FVDAVA
Sbjct:    1 MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPPNTVGNRSGGDNYAWIGRKCRYSCDEGARVARDRATPSPGRFTQAPARVRKANVVPSQPSMPFVDAVA 115
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16096.1 vs. uniprot
Match: A0A6H5KSK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK6_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 8.470e-53
Identity = 82/84 (97.62%), Postives = 84/84 (100.00%), Query Frame = 3 
Query:   84 MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPPHTVGNRSGGDNYAWIGRKCRYSCDEGARVARDRATP 335
            MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPPHTVGN+SGGDNYAWIGRKCRYSC+EGARVARDRATP
Sbjct:    1 MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPPHTVGNKSGGDNYAWIGRKCRYSCEEGARVARDRATP 84
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16096.1 vs. uniprot
Match: D8LQI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI3_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 2.830e-45
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 3 
Query:   84 MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPPHTVGNRSGGDNYAWIGRKCRYSCDEGARVARDRATP 335
            MTTMA MRYFY+TDDDFIPLKIDNDGD+ C+KCRRAFWKGETIEIIPP+TV N+SGGDNYAWIGR+CRYSCD GAR ARDRATP
Sbjct:    1 MTTMAHMRYFYHTDDDFIPLKIDNDGDKSCYKCRRAFWKGETIEIIPPNTVKNKSGGDNYAWIGRRCRYSCDGGARGARDRATP 84
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16096.1 vs. uniprot
Match: A0A6H5JYS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYS8_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 3.690e-7
Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 2 
Query: 1370 TEGQTRKGLLARIFKWITSCVCISEGGCPIF 1462
            TEG+TRKGLLARIFKW+TSC CISEGGCP F
Sbjct:  478 TEGKTRKGLLARIFKWVTSCECISEGGCPTF 508
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16096.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LQI4_ECTSI2.270e-6796.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSK6_9PHAE8.470e-5397.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQI3_ECTSI2.830e-4586.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYS8_9PHAE3.690e-787.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:739970..746799 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size678
Model size1524
Exons3
Hectar predicted targeting categoryother localisation
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16096.1prot_E-siliculosus-1a_M_contig8.16096.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig8 740053..746036 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936171.6714838-UTR-E-siliculosus-1a_M_contig8:739969..7400521622936171.6714838-UTR-E-siliculosus-1a_M_contig8:739969..740052Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 739970..740052 +
1696250961.0819821-UTR-E-siliculosus-1a_M_contig8:739969..7400521696250961.0819821-UTR-E-siliculosus-1a_M_contig8:739969..740052Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 739970..740052 +
1622936171.804884-UTR-E-siliculosus-1a_M_contig8:746036..7467991622936171.804884-UTR-E-siliculosus-1a_M_contig8:746036..746799Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 746037..746799 +
1696250961.1254168-UTR-E-siliculosus-1a_M_contig8:746036..7467991696250961.1254168-UTR-E-siliculosus-1a_M_contig8:746036..746799Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 746037..746799 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936171.7495034-CDS-E-siliculosus-1a_M_contig8:740052..7403061622936171.7495034-CDS-E-siliculosus-1a_M_contig8:740052..740306Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 740053..740306 +
1696250961.093129-CDS-E-siliculosus-1a_M_contig8:740052..7403061696250961.093129-CDS-E-siliculosus-1a_M_contig8:740052..740306Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 740053..740306 +
1622936171.7638686-CDS-E-siliculosus-1a_M_contig8:745443..7458391622936171.7638686-CDS-E-siliculosus-1a_M_contig8:745443..745839Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 745444..745839 +
1696250961.1044898-CDS-E-siliculosus-1a_M_contig8:745443..7458391696250961.1044898-CDS-E-siliculosus-1a_M_contig8:745443..745839Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 745444..745839 +
1622936171.780656-CDS-E-siliculosus-1a_M_contig8:746008..7460361622936171.780656-CDS-E-siliculosus-1a_M_contig8:746008..746036Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 746009..746036 +
1696250961.115025-CDS-E-siliculosus-1a_M_contig8:746008..7460361696250961.115025-CDS-E-siliculosus-1a_M_contig8:746008..746036Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 746009..746036 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig8.16096.1

>prot_E-siliculosus-1a_M_contig8.16096.1 ID=prot_E-siliculosus-1a_M_contig8.16096.1|Name=mRNA_E-siliculosus-1a_M_contig8.16096.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=226bp
MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPPHT
VGNRSGGDNYAWIGRKCRYSCDEGARVARDRATPSPERFTQAPARVRKAD
VVPSQPSMLFVDAVAVPSETSEFIPQAVAVSPEPSVPVSSMGVARAQPSG
RDQETVVVPPKPSAPVQETVPVPPQSPEPTQGTEAAPPLPSAPVFSVGVA
SPQRSGRVVRGAVAPPHRRRLFKGR*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig8:739970..746799+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig8.16096.1 ID=mRNA_E-siliculosus-1a_M_contig8.16096.1|Name=mRNA_E-siliculosus-1a_M_contig8.16096.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6830bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:739970..746799+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTGCACATCTCACACTTGCTCCAACCCCTCTCCCCTCCTACAACTCTTCC
CTGCCTACCCTAACCATCAATTGTGGCAGCGTGATGACGACAATGGCGAT
CATGCGGTACTTCTATTACACCGACGATGATTTCATCCCTCTCAAGATCG
ACAACGACGGCGACCGGTTCTGCTTCAAGTGTCGTCGGGCCTTTTGGAAG
GGAGAGACGATCGAAATTATCCCGCCTCACACCGTCGGAAACAGATCGGG
GGGTGACAACTACGCCTGGATTGGGAGGAAGTGTCGCTACAGCTGCGACG
AGGGAGCACGGGTCGCGAGAGACAGGGCAACCCCCAGGCGAGGCTCTTCT
TTCACATTTTGCGCATGCACAGACTCTTGTTTGCATGCACAGAACGGTTC
GAGGATTTTTTCGGGTTCTGGTATGAAAAGGCACACGGCACAAAGATATG
AAGAAATAAATCACGCACACACTTCACAACGTGCATGTCATTCCGTCGGA
GGCACAACTTGTCGCTTGAATCGAACGTAGGCATATAGCAGCAGCAGTAG
ACGTGTCTAGACTACGTTCGCTTCTCCCGCCACTAAAATATCACGCGCAC
GGCATTCGCGGAAGAAAGGTGACCGTGCGCCCCCCGCGTCCGGGCCCCCT
CGAGGCTGCCACCCGCGTTGACGGACCCCGCGAAAGGATCGATGGGGAGA
CGTACTTATTGTACATCTATTTCGAAAGCAGCCTAGACGATGTACACGAC
CCGAAGAAGTCCTTGTCTAACAGGCCGTACGTTCTGTAGACTACCTATAC
TAGTATGATACATCGACATGTCGTGACGCAGTAGTAGACTAATGTACATG
TTCCCTAATGTGTGCAAAGACTCTTGCATTCCTTCTGCAAGCGTACCGTC
TACATGCTCTCGTGGTACCACCGTACACAGTCAGAGCCTTTTTTCCGCCA
AAGACTTGGCACCATTTTTTGGCTGAGTGACCTATCTGTCTATCTATAAT
AGTACAAAATGCTCAAAGTGTTCCACGGCGAGATACGGTCAGCGTCGTTT
TTTTCCTCTTTCGGCTAGTGATGTTGTTCGGGTAATTGCAAGGATTAGGA
TTAGGATTCTAACAAAATTACTACTAGGTTAGTCTCACTGAACTTCAATG
GAAACGTGCCAAAGGTAAACGCACGCATGCATGCACAGAAAACTTACAAG
GATTTTGGCGCTTACGCCGCCACGCTCAGTGAAGCACGCCCCACAGAAAA
AAAGTTCAAACATTGGCGGTTGCGGAATTGGGACCGTTGCATTGCTGACG
TGAAGCATGGGTGTATATGTACGTATAGGCGGTGGGCAGCGGTAGGCAAT
TGATGCATCGTGGGGGGAGGACGGCGGAGGTTTGATTCATCAGCATCGTT
AACCAAGCATGTCTCTCACACATCGTTTTTGGTTGTGGACCCACGAAAAA
TGGGTAAAAAGGCCGGTTTTCTTTTCACCGTCGTTTCGCGTTTTCTTCAC
GTTCTTGCCGTGAAATTTGTGGTTCGTTTGGAACGGGCCCAACTTTCAGA
AGCGCAGCACCCATCGCGCGCCATTTGAAAGATCCACATGTGCATTGTAG
GCACTACAACACTACGTGTCGACTATATTCAACAAGATAAAAAAAATGGC
ATGACGCCATCACCTCTGCCTGGCGACGAGTAGGCGTCAAAGCACGACAT
TCTACTGTACCAGGCCGTAAAAAATCACACACGAAGAAGCACACCACAAA
TCCATGATCGTGTTTGTGCGTGCTGGGCAGCTGAGTGAATGCGCGCGCGG
TTGTAGCGAATATGTGCGCGATGCACGAGGGGGCGAGAAGGAAAGCTGTG
GCACACTGAAACGAATCAGAATTCGTCAAGCTGCACGAGGAGAGGGGGAT
TGCCCTGCAGTCTAAGTTCTGGTTCTCGATCGACCACGGACACAAACCAC
GAGATACAACGAGAGCCCCCGCGCCCTTGCATCCTTTCGGTCATAAAAAA
TCAGTGGCTTAGGGTCTGCAAAGACTGGGTACAGTCAAGAGCAGTTCCCT
AATGGTTGTGGCCTGTGCTGGATCGCTTGGTGTGTTCTTTTCAGCGAACG
TCAGATCTGCTGCAAAGAGATCCTCACTAAAAACAAGATAATATGTAGCC
TGATGATGACGCCAGTTAACAGTCTATATGTATGTTCGAGTGATGTGTGC
TATGGCGGCGATAGTGCGCCAGGCGGGCGACAGGTATCGAGCACAAAATG
AGACCATTTCTGGAACACGCTGAAGAAGCGTTAGCGTTACTCTTACTCGG
TCAGAAAAATGCCATTCGTGTATCAACTTCTGCAGGAAGAAAGGAGCTCT
TCCTCCTGTTTGGGACGTCGCTAGCCGTTGAACGATGTAAACATCGGGCT
GTCTGCACGTCAGCGGCGCGGATAGTTGCCTTTCCAGGCAACACACGCTG
ACGTGTAGTTTGCACATTACATGCGTACATTCGCCTGCCTGCATACATAA
ACAAAACGCGCGGAATCCTGTTTATTACCCGAAAGTGTAGTCCCAAGAAA
GCACACGAGATTTGATGTGAAAGACCTTTAAAAACTGAAACGACGGTCGG
TAGGCTCAAGAAACGACTTCAATCCACACGGTAGAAGTCGACTGCCTGGT
GAAGCCTTGAATCTGTTCGTTTTCACAATCAATAGTAAACGGTGTAGCCT
GACAGGAGCCGGGGCAGAACCCGCCATGTTCGTGCACTACACGCTTGATG
ATTGATGCGAAACAAACCAAGGTGGAAGCGATGATGTTCGTGATAAGTGT
TACAGTAGAGGTCCCTGTTTAAGGCCGCAAATTTAAGGCCGGTGGCCCTT
TTTAAGGCCGGTGAAATCGTCTGTCACACTTTCCTTCCTTTTTAAGGCCG
CATAGGCCTTAAACAGGCATAGTCCCTATTTAAGGCCTATTAGGGCATCC
GCGCACCCTATATAAGGCCGGTTTTGGTGTGACGCACCCAGTTCTTCGCC
AGCATTATTCAAGCCGCAACACAACCACTCCAGAGATCTACACAACAGCA
ATACCTAGCGCATACCCCTACCGACCCAACCAGTAGGGGCACACATGCCT
TGTGCGGCTGGTGAACTGTGCCAACTGCCAGACCGTACGCCAGAAGCCCC
TGACGGCCACCAATGTCACGGAGGGTGTGGCGGCAGACTGCACGGACTGT
GTGGGGAACAAGACCAAGATGCGGAGTTCGAAACCGCCCGCATCTGCTAT
GCGTGCATTGCCTCCAAGCAAAAGCAAAAGGCTAGTGATGCCTCCACAGC
TGGCAAGGGCTCCACAGCTGGCAAGGGCAAGCGCAAAGGGTCAGCCACGG
AGAGCGGAGACACGGCAAGACCAAAAAAACGAAACCAGCCAACCACCCGG
ACATGACTGGTTCGCGGACGCGGATGGACATCGGCACCAAGATGGAGATC
CTACGTCTGCTGGACAAGGGCACGCGGACGCAGAAGTCGATCGCAGAGCA
GTTCAACTGCGGGGAGCGCACGGTGCGTAACGTCAAGGCCGAGCGGGCGA
AGATAGAGAATCAGGCCGCCAAAACTCGCAGCAGCGCCACCTCAAGGAAG
AACCTTCGGGCGGGGGCGGCCCTGGGCATCACTGCGGGAGAGCCCGTCGA
TGCTGCCGCTGTGCGAGCGGCTGAAGTGTGGGCGACGGTGGAGGACCAGC
CGGATGTTGTGGAAGCGATTCAGCAGGACGCCGTGGACGAGATGACGGAG
GTGCTTGCTGGCGCGGCTCTCGCGGAGGAGAGCTCGGACGACGAAGCGAG
CGAGGAACCCTCAAGTTATACGGCACCTCCGCCGTACGCGGCACTTTCGT
CGCACTTCGGGGCTCTGGAGGCGGCAGCGGAGGGGAGCGGCAACCATGAC
GCCGCTTTCCACATTCAGAAGGCCAAAATGGCAATGATCGCAGCGCATGG
TTCGAAGGCAACGAGGCAGACAGACATGAGGCAATTTTTGTAGACTCGAT
AGGCGCAAGGGGGAGGCATCAGTTGAGTGTGGTTCTCACGCGTCCGGTGT
CATGTCCAGTTTCATCCTTGTATTTTCAACTTTCGTGTGCCGTTGTTAGT
GTATCTGGGGGTGGAGAGGTCGGGCTGTTCGATTTTTGTGTCGACTTTGT
GTTCGACGGGTAAGCACCAGTTGGTCAGTCGGTGCAACATGTGCATTTTT
CCATGGTTGTTGTGTTGTGCAGATCGTCGGACTTTTTTTGCTGTGGGCGT
CCTCTCATTCTGATCAGGATTGGCAGTATTATTGTCGACCTTCACGAGGG
TGTCACTCGATGAGATATGTATGTACTTCGCACGTACCAAGTGAAATACT
TCTAATATACTTCTACATATTTTCTGTTGACGTCAGCTGCGGCAGCAAGT
AATACATATTTGGAAATATGCAACATCATTTTTTGTCACGACTTGTGCGG
CAATATTTATCTTTCATGTATAGCGTGCTTCCTGCGAGCCTTCAGACAAG
TTGGGGCCCGCCACCGTCCCGAAAGGCTTGAGTGCAGCATCAATATTCCT
CAATAAGGCCGGTATCGGCCTTATTGAGGAAAACTCAATCCTCTATAAGG
CCGGTACCGGCCTTAAACAAGACCCGTTCCCAATAAGGCCGGGTGCCCTA
TTTAAGGCCGGTTATTTCGTCTGTCACAGGGCGGCCTTAAACAGGGACCT
CTACTGTATAGCCATTCGTATCCCATTGGCGAGAAAATGTTGAGTGGGGC
GTGGCAACCTTCGAGGACGAGTGAGTGTCGGGAGAGTTCCGACAGCGTAA
GGCCGCTGCATGGGCGCTCCCGAAAACCGTGTTTGTTTCGGTCGGTGCAA
AGTATGTGCTTTGCTTGGCGGCTTGCTCCTTCGTAGCGACGCTGATGACG
AGAGCACCGGCCCAATCTCGAGTCTACGATAGAACACATGGTTATGCAAG
GTGTAAAAGAGAAATCTGGAAGCATCTTGAACGTTGGCGATTGTTTTATG
AAGTGCACACCTATGAAGAAAACGTGACATGATACGTACGGTAGAATGTT
TCCTCTTTCTCACAACGATGGTTTTGCCTAACCTACGGAGGCAGATACCG
GTCGTGATTCTCGTCGCTGGTCTTTGCTCAGTCTATTTTCACCGCGGGTA
TGTAGCGTGCGTTGATGAAGAAGCAAACAACCCAGGCACGCGTGTAGAAC
ACAAAAACAAAATAAACAAGTACGTTAACGCCCAAACACGCAGAGAAGTA
AGTGCGATCGACACAGTTCTAGTAACAACGGCACAGGACACATGCACCGC
GACTTCCATCCGGCCATATGAAACGCCACCACAGCAGCAAGCAGTTCTCC
AGCAACGACACAGTCGCCATATCCCTGCTTCCTCCCAAATGTTTGACCCT
TTTCGGTGCCCTTCTCCGCCCGCCTCCCATTTCCTTACACCCGACCGGCG
AATGCACGGATTATTGTGACACAGTCCCGAGCGGTTCACCCAGGCGCCGG
CGCGTGTTCGAAAGGCGGACGTTGTGCCCTCCCAGCCGTCGATGCTTTTT
GTGGACGCGGTTGCTGTGCCCTCCGAGACGTCGGAGTTCATTCCACAGGC
GGTAGCTGTGTCCCCCGAGCCGTCGGTGCCTGTTTCCAGCATGGGAGTTG
CGCGCGCCCAGCCATCGGGGCGTGATCAAGAGACGGTAGTTGTGCCCCCC
AAGCCGTCGGCGCCTGTTCAAGAGACGGTACCTGTGCCGCCCCAGTCGCC
GGAGCCTACTCAAGGGACGGAAGCTGCCCCCCCCCTGCCGTCCGCGCCTG
TTTTCAGCGTGGGAGTTGCATCCCCCCAGCGATCGGGGCGTGTGGTCAGG
GGGGCAGTTGCGCCCCCCCAGCCGTCGACGCCTGTTCAAAGGACGGTAGT
TGTGCCCCCCCAGTCGCCGGAGCCTACTCAAGGGACGGAAGCTGCCCCCC
CCCTGCCGTCGGCGCCTGTTTTCAATATGGGAGTTGCGCCCCCCCAGCCA
TCGGGGTGTGTTGTCAGGGGGGGAACTGCGCGCGCCCAGCCGTCGACGCC
TGTTCAAAGGACGGTAGTTGTGCCCCCCCAGTCGCCGGAGCCTACTCAAG
GGACGGAAGCTGCCCCCCGCCTGCCGTCGGCGCCTGTTTTCAACTTGGGC
GTTGCGCCCCTGAAGCCATCGGGGCGTGTTGTCAGGGGGGGAGCTGCGCG
CGCCCAGCCGTCGACGCCTGTTCGAGAGGCGGTGGTTGTGCCCCCCCAGC
CGTTGACGCCTGTTGAAGAGGCAGTAGGTGCGCCCCCCCATCCATCGGCG
CCTGTTGAAGAGATGGACGTTGCGAGTCCCCAGCCGTCCATGGCTGTTGA
AGAGACCAAGCCATCGGCTCCTGTTGAACAGGCGGTAGTTGTGCCCCCCC
AGCCGCCGGCGCCTGTCGACGAGACGGTAGTTGTGCCCCCCGAGCCGTCC
CCCCCAGTTCAAGAGACGGTGGTTGTGCCCCCCCAGCCGCCGGCGCCTGT
TGCAGAACCTGAAGTTGCGCTCCCCCAGCCGTCTGTGCCTGTTCAAGAGA
CGGTAGTTGTGCCTCCCCAGCCTTCCACGCCTGTTCAAGAAACGGTAGTT
GTGCCGCCTCAGCCCCCGGCGCCTGTTGAAGAGCCAGAGATTGCGCCCCC
CCAGCCGCCGGCGCCTGTTGAAGACACGGAAGGGCAGACTAGGAAAGGGC
TTTTGGCGAGGATTTTCAAGTGGATCACCAGCTGCGTGTGCATATCAGAA
GGAGGGTGTCCTATCTTTTAATTGTTGTCTTTCTAGGCAGACTGCTATTC
ACTTGACAGCAAGATGGAGTGGGAAGGGAG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:739970..746799+

>mRNA_E-siliculosus-1a_M_contig8.16096.1 ID=mRNA_E-siliculosus-1a_M_contig8.16096.1|Name=mRNA_E-siliculosus-1a_M_contig8.16096.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1356bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:739970..746799+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGACGACAATGGCGATCATGCGGTACTTCTATTACACCGACGATGATTT
CATCCCTCTCAAGATCGACAACGACGGCGACCGGTTCTGCTTCAAGTGTC
GTCGGGCCTTTTGGAAGGGAGAGACGATCGAAATTATCCCGCCTCACACC
GTCGGAAACAGATCGGGGGGTGACAACTACGCCTGGATTGGGAGGAAGTG
TCGCTACAGCTGCGACGAGGGAGCACGGGTCGCGAGAGACAGGGCAACCC
CCAGATGACGACAATGGCGATCATGCGGTACTTCTATTACACCGACGATG
ATTTCATCCCTCTCAAGATCGACAACGACGGCGACCGGTTCTGCTTCAAG
TGTCGTCGGGCCTTTTGGAAGGGAGAGACGATCGAAATTATCCCGCCTCA
CACCGTCGGAAACAGATCGGGGGGTGACAACTACGCCTGGATTGGGAGGA
AGTGTCGCTACAGCTGCGACGAGGGAGCACGGGTCGCGAGAGACAGGGCA
ACCCCCAGTCCCGAGCGGTTCACCCAGGCGCCGGCGCGTGTTCGAAAGGC
GGACGTTGTGCCCTCCCAGCCGTCGATGCTTTTTGTGGACGCGGTTGCTG
TGCCCTCCGAGACGTCGGAGTTCATTCCACAGGCGGTAGCTGTGTCCCCC
GAGCCGTCGGTGCCTGTTTCCAGCATGGGAGTTGCGCGCGCCCAGCCATC
GGGGCGTGATCAAGAGACGGTAGTTGTGCCCCCCAAGCCGTCGGCGCCTG
TTCAAGAGACGGTACCTGTGCCGCCCCAGTCGCCGGAGCCTACTCAAGGG
ACGGAAGCTGCCCCCCCCCTGCCGTCCGCGCCTGTTTTCAGCGTGGGAGT
TGCATCCCCCCAGCGATCGGGGCGTGTGGTCAGGGGGGCAGTTGCGCCCC
CCCATCCCGAGCGGTTCACCCAGGCGCCGGCGCGTGTTCGAAAGGCGGAC
GTTGTGCCCTCCCAGCCGTCGATGCTTTTTGTGGACGCGGTTGCTGTGCC
CTCCGAGACGTCGGAGTTCATTCCACAGGCGGTAGCTGTGTCCCCCGAGC
CGTCGGTGCCTGTTTCCAGCATGGGAGTTGCGCGCGCCCAGCCATCGGGG
CGTGATCAAGAGACGGTAGTTGTGCCCCCCAAGCCGTCGGCGCCTGTTCA
AGAGACGGTACCTGTGCCGCCCCAGTCGCCGGAGCCTACTCAAGGGACGG
AAGCTGCCCCCCCCCTGCCGTCCGCGCCTGTTTTCAGCGTGGGAGTTGCA
TCCCCCCAGCGATCGGGGCGTGTGGTCAGGGGGGCAGTTGCGCCCCCCCA
CCGTCGACGCCTGTTCAAAGGACGGTAGCCGTCGACGCCTGTTCAAAGGA
CGGTAG
back to top