prot_E-siliculosus-1a_M_contig8.16070.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16070.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16070.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length181
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16070.1 vs. uniprot
Match: D8LQL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQL5_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 9.110e-115
Identity = 169/180 (93.89%), Postives = 171/180 (95.00%), Query Frame = 0 
Query:    1 MAGPDIKWTAGPGPAPLPYSKRAREAMGVTDDDKPWAHPDPPAAESWGFGGGGESDALREGRLRTNLFLIVLSIIFAIWVYRKVVKRDHSPFFHVSPTPSQSEDVKVSEEDMRTAREARLKRFQETKTSYADMMKEAAGGWSPADTVQNDDDGGNSVAAEGQGCSDGLRRRGRGDQATTG 180
            MAGPDIKWTAGPGPAPLPYSKRAREAMGVTDDDKPWAHPDPPAAESWGFGGGGESD L EGRLRTN FLIVLSIIFAIWVYRKVVKRDHSPFFHVSPTP QSEDVKVSE DMRTAREARLKRFQETKTSYADMMKEAAGG  PA+TV+NDDDGGNSVAAEGQG SDGLRRRG GDQATTG
Sbjct:    1 MAGPDIKWTAGPGPAPLPYSKRAREAMGVTDDDKPWAHPDPPAAESWGFGGGGESDTLTEGRLRTNFFLIVLSIIFAIWVYRKVVKRDHSPFFHVSPTPPQSEDVKVSE-DMRTAREARLKRFQETKTSYADMMKEAAGGCPPAETVRNDDDGGNSVAAEGQGYSDGLRRRGGGDQATTG 179
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16070.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQL5_ECTSI9.110e-11593.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..180
NoneNo IPR availableTMHMMTMhelixcoord: 65..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:412305..415352 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16070.1mRNA_E-siliculosus-1a_M_contig8.16070.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 411829..415439 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16070.1 ID=prot_E-siliculosus-1a_M_contig8.16070.1|Name=mRNA_E-siliculosus-1a_M_contig8.16070.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=181bp
MAGPDIKWTAGPGPAPLPYSKRAREAMGVTDDDKPWAHPDPPAAESWGFG
GGGESDALREGRLRTNLFLIVLSIIFAIWVYRKVVKRDHSPFFHVSPTPS
QSEDVKVSEEDMRTAREARLKRFQETKTSYADMMKEAAGGWSPADTVQND
DDGGNSVAAEGQGCSDGLRRRGRGDQATTG*
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