prot_E-siliculosus-1a_M_contig77.15846.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig77.15846.1
Unique Nameprot_E-siliculosus-1a_M_contig77.15846.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length611
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig77.15846.1 vs. uniprot
Match: A0A6H5JSS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSS0_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 7.440e-73
Identity = 236/478 (49.37%), Postives = 243/478 (50.84%), Query Frame = 0 
Query:  206 VSASPKNYGRHRHPAEGAPAIVDSPGGGTAGSGRGGSRAGAGGFLRLVRDSGNSSAATLSTSGRGEEXXXXXXXXXXXXXXXXXXXXXXXXDG----ARDSEVEQELHQREEEEGRQHREEGRGVGHDGHRRKHEEGEEEAITRPTRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRLLRRVELRTPAE----------------------------------------------------------------------------EEEAEAIRKSQELTSSYNEPLRESKSTASPSNYRHVSGSGDTLVGRTREGKDPDHHHPGVAAGGVRATERTGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEAGREISDIDRRLGELHEFLKRAKEGGGIXXXXXXXXXXXXXXEVGAEGVTEASA 603
            VSASPKNYGRHRHPAEGAPAIVDSPG GT GSGRGGSRAG GGFLRLVRDSGNSSAAT S SGRGEE          XX     XXXXXXX      ARDSEVE ELHQREEEEGRQH E GR  G DG RRK  EGEEEAITRPTRG       X                                        L   +E++ P                                                                               +   A R+SQELTSSYN PLRESKSTASPSN RHVSGSG  LVGRTREG DP+HHHPGVAAGGVRATERTGQ               XXXXXXXXXXXXXXX                            XXXXX EMEAGREISDIDRRLGELHEFLKRAKEGGG+              EVGAE   EASA
Sbjct:  221 VSASPKNYGRHRHPAEGAPAIVDSPGAGTPGSGRGGSRAGVGGFLRLVRDSGNSSAATTSMSGRGEEDVTSGGWRRRXXPRDRWXXXXXXXXXXXXXARDSEVEHELHQREEEEGRQHCE-GRRAGDDGRRRK--EGEEEAITRPTRGGGTVRNGXGTAGAGWGGLAGGLVLLVHEVFGGVVGDAAASEVTQC---LQLSLEVKAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLPRKIPPAPRQSQELTSSYNAPLRESKSTASPSNRRHVSGSGGILVGRTREGNDPNHHHPGVAAGGVRATERTGQ------GEGQRRQAFXXXXXXXXXXXXXXXPRLRGAAIDAPADDGQDPQEPPSFAAVDXXXXXGEMEAGREISDIDRRLGELHEFLKRAKEGGGVGAGLPLALPPAPTLEVGAEAAAEASA 686
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BLAST of mRNA_E-siliculosus-1a_M_contig77.15846.1 vs. uniprot
Match: D7G256_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G256_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 2.310e-70
Identity = 306/403 (75.93%), Postives = 314/403 (77.92%), Query Frame = 0 
Query:  214 GRHRHPAEGAPAIVDSPGGGTAGSGRGGSRAGAGGFLRLVRDSGNSSAATLSTSGRGEEXXXXXXXXXXXXXXXXXXXXXXXXDGA---------RDSEVEQELHQREEEEGRQHREEGRGVGHDGHRRKHEEGEEEAITRPTRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRLLRRVELRTPAEEEEAEAIRKSQELTSSYNEPLRESKSTASPSNYRHVSGSGDTLVGRTREGKDPDHHHPGVAAGGVRATERTGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEAGREISDIDRRLGELHEFLKRAKEGGGIXXXXXXXXXXXXXXEVGAEGVTEASASASS 607
            GR     EGAPAIVDSPGGGT GSGRGGSRAGAGGFLRLVRDSGNSSAATLSTSGRGEE         XXXXX     XXXXX            RDS VEQ LH+REEEEG QH                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TRLLRRVELRTPAEEEEAEA+RKSQELTSSYN P+RESKS ASP NYRHVSGSG  LVGR R G DPDHH+PGVAAGGVRATERTGQE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       EMEAGREISDIDRRLGELHEFLKRAKEGGG+   XXXXXXXXXX EVGAE  TEASAS+++
Sbjct:  146 GRPEVGIEGAPAIVDSPGGGTPGSGRGGSRAGAGGFLRLVRDSGNSSAATLSTSGRGEEDVAGGGWRRXXXXXDRWDDXXXXXXXXXXXXXXXXXRDSGVEQGLHRREEEEGWQHX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATRLLRRVELRTPAEEEEAEAVRKSQELTSSYNAPVRESKSAASPRNYRHVSGSGGALVGRMRGGNDPDHHYPGVAAGGVRATERTGQEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDG-----EMEAGREISDIDRRLGELHEFLKRAKEGGGVGAAXXXXXXXXXXSEVGAEAATEASASSAA 541
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig77.15846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSS0_9PHAE7.440e-7349.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G256_ECTSI2.310e-7075.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig77contigE-siliculosus-1a_M_contig77:588020..593884 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig77.15846.1mRNA_E-siliculosus-1a_M_contig77.15846.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig77 588020..593884 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig77.15846.1 ID=prot_E-siliculosus-1a_M_contig77.15846.1|Name=mRNA_E-siliculosus-1a_M_contig77.15846.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=611bp
RGRSRSNGSSRRGGATPAFDPTAYQRERQAKLQRLEEDRRRRERREIGYS
PARNSGRDSWIGSSRDRGSGPSLAGVAAIAPRGRTTARGGGSSGYASAGS
QASRASRGSSTSASHSGGGGGGGGGGGSGGIGGGTKYSASGRFEATPNGS
RRAGAGRPSSRADSRGRWGASPSRGGGGRYGGGGSRGDRATGGRDSPRTL
RQPRKVSASPKNYGRHRHPAEGAPAIVDSPGGGTAGSGRGGSRAGAGGFL
RLVRDSGNSSAATLSTSGRGEEDVAGGGWRRRRRPRDRWDDDDGGGDGAR
DSEVEQELHQREEEEGRQHREEGRGVGHDGHRRKHEEGEEEAITRPTRGG
GTVRKGGGRAGTGWGGLASSSGAGGVGGGGGSCSSSMRSSAASSATRLLR
RVELRTPAEEEEAEAIRKSQELTSSYNEPLRESKSTASPSNYRHVSGSGD
TLVGRTREGKDPDHHHPGVAAGGVRATERTGQEEGRRRQAFFSASSSSSI
QQQQEEPTLRGAASDAPAGGGGGQDPPEPPSFAAVDSGGGGGGGGGEMEA
GREISDIDRRLGELHEFLKRAKEGGGIGAGLPLPLPPPPPPEVGAEGVTE
ASASASSPGV*
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